Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0656500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:25613825:25616179:1 gene:Os03g0656500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CADMIUM TOLERANT 1 description:Similar to K-exchanger-like protein. (Os03t0656500-01)
Sequence

ATGGCGCTCCTGCGCAGGCGGGGGTACAGTGCCGCCGTCCCCAGCGCCTGCTGCTTCCTC
CTCCTGCTGCTCGTCCTCTCCGCCTCCCACCTCCTGCCCACTCGCCGAGGCCATGGCGGC
GTCCTAGAAGGGTTGGCCCTTAGGGGGAGCGCCTCTCGTTCTCGTTCTGGTTCGTCGTCG
TCCTCTTCCGCCGGCGAGGAGCAGGGAAGTTGCCAGGAGCTGCAGTCCATCGAGGGCGGG
GAGGCCAGGTGCCTGTACCTCCGGACGCACCCGCCGTGCGCGCCCGCGGGGTACGTGGAC
TACCTCAGGCTGTTCTACTGCGGGTTCGCCCACGCGCCGGCGGCGGGGTACGCCGCGGCC
GTGCTCTGGCTGGCGGTGCTCTTCTACCTGCTCGGCGACACCGCGTCCGAGTACTTCTGC
GCGTCCCTCGAGGGGCTCTCGGCGGAGCTGCGCCTGCCGCCGGCCATCGCTGGCGTCACG
CTGCTCTCGCTCGGGAACGGCGCGCCGGATGTCTTCGCCAGCGTCGTCTCCTTCGCGGCC
GGCGACGGCGGGGGCGTCGGGCTCAACAGCGCGCTCGGTGGCGCGCTGTTCGTGTCCACC
GTTGTTGCTGGGGTGGTCGCGCTCGCCGCCGCCTCGCGTGCCGGCCGAGGCGGGGTTGTG
GTGGAGCTGCGGGGATTCGTGCGCGACATCTGCTTCCTCCTCCTCGCGCTCTGCTCACTC
CTCGCCATACTGGTGACCGGCACGGTCACCGTCTGGGTGTCCGCGTCCTTCGTCTCGCTC
TATGTCGCGTATGTCCTCCTCGTCTGGACCTCCCACTGCTGCTCTGAACCGGGGAAGCCG
CCGCAGGCCGACCTCGCCGCGCCGCTCCTCCTCGACGACGACGGCGGCGTCACGCCACTG
CCGTCCTACTCCAAGAACTCGGCGCCCTCGAAAAAAAGAGCCTACCTTCATTGCCTCCTA
TCCGCGATCCTCATCCCGCTGTACCTCCCTCGCCGCCTGACAATCCCGGACATCGCCGGG
CACCGCTGGTCCCGGCCCTGCGCCGTGGCGTCCCTCGCTCTGGCGCCGGTCCTCCTCGCC
GCCACCTGGGCATCGTCGTGCCGGCATGCCCTCGCCGTCCTCCTCGGCGGCGCCCTCCTC
GGCCTCCTCCTCGCCGCGCTCGCCGCGGCCACCACGGAGGCGGCCTCCCCACCCCGCGGG
CGGTGGCGGCGCGTGCCGTGGCTGGCGGCGGGGTTCCTGATGAGCGTGCTGTGGGCGTAC
ACCCTGGCGCGCGAGCTGGTGGCGCTGCTGGTGGCGATCGGGTACATGGTGGGCGTGAGG
GCGAGCGTGCTGGGCGTGACGGTGCTGGCGTGGGGGGACTCGCTGGGCGACCTGGTGTCG
AACGTCGCCATGGCGCTGCACGGCGGCGCCGGCGGCGCGCAGACGGCGGTGTCGGGCTGC
TACGCGGGCCCGCTGTTCAACACGGTGGTGGGGCTGGGCCTCTCGCTGACGCTGGCGGCG
GGGTCCCAGTACCCGGCGCCGTTCGCGATCCCGGCGGGCGGGGCGGTGTACGAGGCGGTG
GGGTTCCTCGGCGCCGGGCTGGCATGGGCGCTGCTGGTGGTGCCGGCGAGGGGGATGCGG
CTGGACCGGGTGTACGGCATGGGCCTCATCGCCATCTACCTCGCCTTCGTCACCATCCGC
GTCTTCGACAGCCTCGGCCTCTGGACACACTCCTGGTGGCCAGCATAG

Peptide Sequence

PEP ID

Os03t0656500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:25613825:25616179:1 gene:Os03g0656500 transcript:Os03t0656500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CADMIUM TOLERANT 1 description:Similar to K-exchanger-like protein. (Os03t0656500-01)
Sequence

MALLRRRGYSAAVPSACCFLLLLLVLSASHLLPTRRGHGGVLEGLALRGSASRSRSGSSS
SSSAGEEQGSCQELQSIEGGEARCLYLRTHPPCAPAGYVDYLRLFYCGFAHAPAAGYAAA
VLWLAVLFYLLGDTASEYFCASLEGLSAELRLPPAIAGVTLLSLGNGAPDVFASVVSFAA
GDGGGVGLNSALGGALFVSTVVAGVVALAAASRAGRGGVVVELRGFVRDICFLLLALCSL
LAILVTGTVTVWVSASFVSLYVAYVLLVWTSHCCSEPGKPPQADLAAPLLLDDDGGVTPL
PSYSKNSAPSKKRAYLHCLLSAILIPLYLPRRLTIPDIAGHRWSRPCAVASLALAPVLLA
ATWASSCRHALAVLLGGALLGLLLAALAAATTEAASPPRGRWRRVPWLAAGFLMSVLWAY
TLARELVALLVAIGYMVGVRASVLGVTVLAWGDSLGDLVSNVAMALHGGAGGAQTAVSGC
YAGPLFNTVVGLGLSLTLAAGSQYPAPFAIPAGGAVYEAVGFLGAGLAWALLVVPARGMR
LDRVYGMGLIAIYLAFVTIRVFDSLGLWTHSWWPA

Transcript Sequence

Transcript ID

Os03t0656500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:25613825:25616179:1 gene:Os03g0656500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CADMIUM TOLERANT 1 description:Similar to K-exchanger-like protein. (Os03t0656500-01)
Sequence

ATTCCGCTTCCTCGGCGCCCGTACGTGCCACCACCGCGTGCCCAACTTGCAAGGTTACTT
AACCCACAAGGGTGTGTTCGCTCTCTCTCTCTCTATCGCTCTCTCGCTCGCGTCGCGTCT
CCTCGCCTCCCGTCCCACTCGCTCTGTTCGCGCGGTACACGCACGCACTACGCACACGGA
CACGCCTCGCGCTGATGAGCTGAGGTGAGCTCGCCCACCGCCCGCGCCGCGAATCCCTCC
GCGCCGCTCCGCCTCCACGCCGAGATCCCCCGCGCGCAAACGCCCCCACCCCACCTCCGA
TCCCCCCCTGCGGGCCGCATGCCGTCCTAGGAATCCCCCGCGTTCTCCCCCGTTTTATGG
CGCTCCTGCGCAGGCGGGGGTACAGTGCCGCCGTCCCCAGCGCCTGCTGCTTCCTCCTCC
TGCTGCTCGTCCTCTCCGCCTCCCACCTCCTGCCCACTCGCCGAGGCCATGGCGGCGTCC
TAGAAGGGTTGGCCCTTAGGGGGAGCGCCTCTCGTTCTCGTTCTGGTTCGTCGTCGTCCT
CTTCCGCCGGCGAGGAGCAGGGAAGTTGCCAGGAGCTGCAGTCCATCGAGGGCGGGGAGG
CCAGGTGCCTGTACCTCCGGACGCACCCGCCGTGCGCGCCCGCGGGGTACGTGGACTACC
TCAGGCTGTTCTACTGCGGGTTCGCCCACGCGCCGGCGGCGGGGTACGCCGCGGCCGTGC
TCTGGCTGGCGGTGCTCTTCTACCTGCTCGGCGACACCGCGTCCGAGTACTTCTGCGCGT
CCCTCGAGGGGCTCTCGGCGGAGCTGCGCCTGCCGCCGGCCATCGCTGGCGTCACGCTGC
TCTCGCTCGGGAACGGCGCGCCGGATGTCTTCGCCAGCGTCGTCTCCTTCGCGGCCGGCG
ACGGCGGGGGCGTCGGGCTCAACAGCGCGCTCGGTGGCGCGCTGTTCGTGTCCACCGTTG
TTGCTGGGGTGGTCGCGCTCGCCGCCGCCTCGCGTGCCGGCCGAGGCGGGGTTGTGGTGG
AGCTGCGGGGATTCGTGCGCGACATCTGCTTCCTCCTCCTCGCGCTCTGCTCACTCCTCG
CCATACTGGTGACCGGCACGGTCACCGTCTGGGTGTCCGCGTCCTTCGTCTCGCTCTATG
TCGCGTATGTCCTCCTCGTCTGGACCTCCCACTGCTGCTCTGAACCGGGGAAGCCGCCGC
AGGCCGACCTCGCCGCGCCGCTCCTCCTCGACGACGACGGCGGCGTCACGCCACTGCCGT
CCTACTCCAAGAACTCGGCGCCCTCGAAAAAAAGAGCCTACCTTCATTGCCTCCTATCCG
CGATCCTCATCCCGCTGTACCTCCCTCGCCGCCTGACAATCCCGGACATCGCCGGGCACC
GCTGGTCCCGGCCCTGCGCCGTGGCGTCCCTCGCTCTGGCGCCGGTCCTCCTCGCCGCCA
CCTGGGCATCGTCGTGCCGGCATGCCCTCGCCGTCCTCCTCGGCGGCGCCCTCCTCGGCC
TCCTCCTCGCCGCGCTCGCCGCGGCCACCACGGAGGCGGCCTCCCCACCCCGCGGGCGGT
GGCGGCGCGTGCCGTGGCTGGCGGCGGGGTTCCTGATGAGCGTGCTGTGGGCGTACACCC
TGGCGCGCGAGCTGGTGGCGCTGCTGGTGGCGATCGGGTACATGGTGGGCGTGAGGGCGA
GCGTGCTGGGCGTGACGGTGCTGGCGTGGGGGGACTCGCTGGGCGACCTGGTGTCGAACG
TCGCCATGGCGCTGCACGGCGGCGCCGGCGGCGCGCAGACGGCGGTGTCGGGCTGCTACG
CGGGCCCGCTGTTCAACACGGTGGTGGGGCTGGGCCTCTCGCTGACGCTGGCGGCGGGGT
CCCAGTACCCGGCGCCGTTCGCGATCCCGGCGGGCGGGGCGGTGTACGAGGCGGTGGGGT
TCCTCGGCGCCGGGCTGGCATGGGCGCTGCTGGTGGTGCCGGCGAGGGGGATGCGGCTGG
ACCGGGTGTACGGCATGGGCCTCATCGCCATCTACCTCGCCTTCGTCACCATCCGCGTCT
TCGACAGCCTCGGCCTCTGGACACACTCCTGGTGGCCAGCATAGCAACACCCCCCACCTA
GCGATCGATATGATCGAGCAGTTGCAACCAAACCTATCGCTGCTCTCGGAGCGCCATCAA
TGGCGACCACTGATTGATTGTAGAACGTAGCCACGTACTACACCTAGCTTTGTGCTAGCA
GCCTAGTAACATCGACTGATAGATCAAAAACCAGATTTTTGTGTATATTACTCACAAGCC
TTTAGCTAACAGCGATGTAGCAATTGTTCATATATCTTCGTTTGGCATCCTGTCGCAATC
CCGACATTAACGAGC