Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0650900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:25268199:25272892:-1 gene:Os03g0650900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrogen limitation adaptation 2 description:Ortholog of Arabidopsis NLA (AtNLA), RING-type E3 ubiquitin-ligase (Os03t0650900-01)
Sequence	ATGAAGTTCGGTGCAATATATGAAGAGTATCTTCGGGAACAGCAAGACAAATACCTAACA AAGTGCTCACATGTGGAGTACAAACGTCTCAAAAAGGTACTGAAGAAATGTCGAGTTGGT CGCTCATTGCAAGAAGACTGCCCCAATGGTGACCAGCAGGAGGGGAACAACGAATCTCCA GATATTTGCAAATGCAATTCATGCACATTGTGTGATCAAATGTTCTTTACAGAACTTACT AAGGAGGCTTCAGAAATAGCTGGCTGTTTCAGCTCTAGAGTACAACGTCTCCTAAATCTT CATGTCCCTTCAGGATTTCTACGCTATATTTGGCGTGTAAGGCAATGTTTCATAGATGAT CAACAAATCATGGTTCAAGAAGGCAGAATGTTACTTAATTATGTAACCATGAATGCTATC GCTATCCGTAAAATTCTGAAGAAGTATGACAAAATACATGGTTCTGTCAGTGGTAGAGAT TTCAAGAGCAAGATGCAAACTGATCATATTGAACTGTTGCAGTCCCCTTGGCTGATAGAA CTGGGTGCTTTCCATCTAAACTGCAATAGTTCAGATATTGATGAAACTGTGGGGTTCCTT AAGAATGAGTTCTTCAAGAATTTTTCCTGTGATTTGACCGAAGCACGACCACTAATGACT ATGGCTATTTCTGAAACTATGAAGTATGAGTACAGCCTAACTTGTCCAATTTGCTTGGAT ACTTTGTTCAACCCATATGCACTTAGCTGTGGCCATCTCTTTTGCAAAGGCTGTGCTTGT GGAGCTGCTTCTGTGTACATCTTTCAAGGTGTTAAGTCTGCACCTCCTGAGGCGAAGTGT CCTGTATGCCGATCGGATGGTGTCTTTGCTCATGCTGTGCATATGACTGAACTTGACTTG CTCATCAAAACAAGGAGCAAGGATTACTGGAGACAGAGACTGCGAGAAGAGCGGAATGAG ATGGTTAAGCAATCCAAAGAATACTGGGACTCTCAGGCTATGCTGTCAATGGGAATTTGA

Peptide Sequence

PEP ID	Os03t0650900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:25268199:25272892:-1 gene:Os03g0650900 transcript:Os03t0650900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrogen limitation adaptation 2 description:Ortholog of Arabidopsis NLA (AtNLA), RING-type E3 ubiquitin-ligase (Os03t0650900-01)
Sequence	MKFGAIYEEYLREQQDKYLTKCSHVEYKRLKKVLKKCRVGRSLQEDCPNGDQQEGNNESP DICKCNSCTLCDQMFFTELTKEASEIAGCFSSRVQRLLNLHVPSGFLRYIWRVRQCFIDD QQIMVQEGRMLLNYVTMNAIAIRKILKKYDKIHGSVSGRDFKSKMQTDHIELLQSPWLIE LGAFHLNCNSSDIDETVGFLKNEFFKNFSCDLTEARPLMTMAISETMKYEYSLTCPICLD TLFNPYALSCGHLFCKGCACGAASVYIFQGVKSAPPEAKCPVCRSDGVFAHAVHMTELDL LIKTRSKDYWRQRLREERNEMVKQSKEYWDSQAMLSMGI

Transcript Sequence

Transcript ID	Os03t0650900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:25268199:25272892:-1 gene:Os03g0650900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrogen limitation adaptation 2 description:Ortholog of Arabidopsis NLA (AtNLA), RING-type E3 ubiquitin-ligase (Os03t0650900-01)
Sequence	TCCGTTGCGCTCGTCTCCTCCTCTCGCCGCGCCGCCGCCCCCCGCCCCCACGATCGACGA CTCGCCGCGCCGCCGCCGCCGCCGCCGCCAACGCATGCAGGCAAGATGAAGTTCGGTGCA ATATATGAAGAGTATCTTCGGGAACAGCAAGACAAATACCTAACAAAGTGCTCACATGTG GAGTACAAACGTCTCAAAAAGGTACTGAAGAAATGTCGAGTTGGTCGCTCATTGCAAGAA GACTGCCCCAATGGTGACCAGCAGGAGGGGAACAACGAATCTCCAGATATTTGCAAATGC AATTCATGCACATTGTGTGATCAAATGTTCTTTACAGAACTTACTAAGGAGGCTTCAGAA ATAGCTGGCTGTTTCAGCTCTAGAGTACAACGTCTCCTAAATCTTCATGTCCCTTCAGGA TTTCTACGCTATATTTGGCGTGTAAGGCAATGTTTCATAGATGATCAACAAATCATGGTT CAAGAAGGCAGAATGTTACTTAATTATGTAACCATGAATGCTATCGCTATCCGTAAAATT CTGAAGAAGTATGACAAAATACATGGTTCTGTCAGTGGTAGAGATTTCAAGAGCAAGATG CAAACTGATCATATTGAACTGTTGCAGTCCCCTTGGCTGATAGAACTGGGTGCTTTCCAT CTAAACTGCAATAGTTCAGATATTGATGAAACTGTGGGGTTCCTTAAGAATGAGTTCTTC AAGAATTTTTCCTGTGATTTGACCGAAGCACGACCACTAATGACTATGGCTATTTCTGAA ACTATGAAGTATGAGTACAGCCTAACTTGTCCAATTTGCTTGGATACTTTGTTCAACCCA TATGCACTTAGCTGTGGCCATCTCTTTTGCAAAGGCTGTGCTTGTGGAGCTGCTTCTGTG TACATCTTTCAAGGTGTTAAGTCTGCACCTCCTGAGGCGAAGTGTCCTGTATGCCGATCG GATGGTGTCTTTGCTCATGCTGTGCATATGACTGAACTTGACTTGCTCATCAAAACAAGG AGCAAGGATTACTGGAGACAGAGACTGCGAGAAGAGCGGAATGAGATGGTTAAGCAATCC AAAGAATACTGGGACTCTCAGGCTATGCTGTCAATGGGAATTTGACTGAGATCTGAAGTT ACAATGATCGCCATTCATTGCTTGCATTGGTGTCAAACCAAAAATAATCAGGTCGACCAT AATCTCAAGCGTGGAGATCATCCAAGATGATTTTAACTTATTAACTGCCAGTCTCCTAAA AGTTGCAATCAGTGAGGACTACCTTGGGATAGCACAGGCTAACACAGCTGAGGTTATTTT ATTTTAGCTCTTGAAGAAGCAATTCCATTCCATTATTTTTTGTCCTAATGTTGTCGCCTG ATATAGTTTAATTTGGAAATGCAACCATATTTAATTAATTTTCTTTGGACCTTCAAATGT AGTTTGGAACAATTTATACGCAATTTATCTGTTCTTTGCTTTGTAAAAACGAGTGTAGAA ATGTCTTATTTGAATGTCTCTGGCTCGCTGC