Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0650700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:25250967:25254279:1 gene:Os03g0650700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation elongation factor EFG/EF2, C-terminal domain containing protein. (Os03t0650700-01)
Sequence	ATGGCGGCGCCGGCGGACCCGCGGCGGGTACGCAACACGTGCATCCTGGCGCACGTCGAC CACGGCAAGACGACGCTGGCCGACCACCTCGTCGCCTCCTGCGGGGACGGCCTCGTCCAC CCGAGGCTCGCGGGGCGCCTCCGCTTCATGGACTACCTCGACGAGGAGCAGCGCCGCGCC ATCACCATGAAGTCCGCCGCCGTCGTGCTCCACCACGGGGGCCACCGCGTCAACCTCATC GACTCCCCGGGCCACATCGACTTCTGCTCCGAGGTCTCCTCCGCCGCGAGGCTCTCCGAC TCGGCGCTCATCCTCGTCGACGCCGTCGAGGGCGTCCACATCCAGACTCACGCCGCCCTC CGCCAGGCCTTCCTCGAGCGCCTCCGCCCCTGCCTCGTCCTCAACAAGCTCGACCGCCTC ATCTCCGAGCTCCACCTCACCCCCGCCGAGGCCTACACCCGCCTCCACCGCATCATCTCC GACGTCAACTCCATCCACTCCGCCCTGCGATCCCACTCCTACTTCTCCCTCCTCTCCTCC CTCGAGGACCAACCTTCCTCCGCCTCCTCTTCCTCGCCGGACGAGCTCCCCGAGGACGTT GACGAAGACGAGGAGGACGCTTTCCAGCCGCAAAAGGGAAATGTTGTCTTTGCCTGTGCC CTTGATGGCTGGGGCTTCCGCATTCACCAGTTTGCTGAGTTCTATGCCGCCAAGCTCCCC AACATCAACGCCAATGCCTTGCTGAAAGGGCTTTGGGGTCCACGATACTTCCACAAGAAG AAGAAGATGATTGTGGGGAAGAAAGGGATGGAGGGCGGCGACGCGCAGCCGATGTTTGTG GAGTTTGTCCTCAAGCCCCTTTGGCAGGCGTATCAGGGAGTGCTGAGCGAGAACGGTGAG TTGGTGAAGAAGGTCATTACAAACTTCAGTTTGCAAGTTCAGCAAAGAGAGCTGCAGAAC AAGGACCCGAAGGTGGTTCTGCAGGCTGTGATGAGCCGCTGGCTGCCGCTCGCTGATGCG GTGATGACGATGGTGGTGGAATGCACGCCTGACCCTGTTGCAGCTCAAGGGGTCAGGGTT GCAAGGCTCATGCCAAAGAGGGAGGTTGCTCCAGAGGATGCTGCTGGTTCCCCTGATATT GTTGTGGATGCAGAGAGGGTCAGGAGCTGTGTGGAGGCCTGCGATGCGAGAGCAGATGCA CCAGTGGTGGTGTATGTGTCGAAGATGTTTGCCGTGCCATATAAAACGTTGCCATTCAGG GGTGTGGATGGGGAGCTGTTGAACCACCAAGGGGCCAATGAGTCTGAGGAGTGTTTTATG GCATTTGCAAGGGTCTTTTGTGGGGTCCTTCGTGCAGGGCAGAAGGTATTTGTGTTGTCA CCACTGTATGATCCAATGAAAGGGGAGGCGATGCAGAAGCATGTACAGGAAGTGGAGCTG CAATACTTGTATGAGATGCTTGGGCAGGGCCTGAGGCCAGTTTCTAGTGTGTGTGCTGGG AATGTGGTTGCAATCCAGGGACTTGGTCATCATATATTGAAGAGCGCCACATTGTCATCC ACCAAAAATTGCTGGCCTTTCTCAAGTATGATGTTCCAGGTGTCTCCGATGCTTAAGGTT GCAATTGAGCCCTCCAACCCAGCAGATTTAGGAGCCCTTGTTAAAGGGCTTAAACTTCTT AACCGGGCAGATCCATTTGTTGAGTACACTGTCTCACAGAGAGGTGAGCATGTTCTTGCT GCAGCTGGGGAGATACATTTGGAGAGGTGTAAAAAGGATTTGGAGGAAAGATTTGCAAAG GTCAAATTGGTGGTCTCAGACCCCCTGGTGTCCTTTAAAGAGACAATTGAAGGCGAAGGC CTTGCCTTGATAGAGAGCCTGAAGGCTCCACGGGAATTCGTTGAGAGAACTACTCCAAAT GGGAGATGCACTGTGAGAGTTCAGGTTTTGAGACTTCCCAATGCGCTCATTAAGGTTCTT GAAGAAAGTGAACAATTGCTTGGTCAAATAATTGAGGGGAAAACAGCAAAGAGGAACGGC GTGTTGGATCCACATCTTTCTCAGGATGATGGTGATTCTGCTGCAACACTTAGGCAACGC CTGATCAATGCTATAGACAGTGAGTTGGAAGCATTTTCTGAGCAAGTGGATAAAGAAAAA CTTGAGAGGTATAGAAATACATGGCTTGGATACCTCCAAAGAATCTGGTCACTCGGTCCT TGGCAGGTTGGTCCAAACCTCCTTCTCTTGCCTGATGTGAAATCAAGTGACAGTGTGATA ACCAGTCAAGATGGAAGGCAAGGCATTCTTGTGCGTGGTAGATCTCATGTCTCTGAGAGA TTAGGATTTGTGTGTGGATCTGATGCTGAAGCTAACAATGATCTTGATGACAGTGAACCA TCAGCAGATACTCCTGAATCATTACATCTAGAATCTGTGGCTCTGAGGAACTGCATAGTA TCAGGTTTTCAATTAGCAACAAATGCAGGGCCACTATGTGATGAGCCCATGTGGGGTCTA GTATTTGTTGTTGAACCTTACATATTCTGTGACCACTCTGATGCTGCAAATCACTCTGAA CAGTACAACATCTTCAGTGGTCAAGTAATTACCGCTGTTAAGGAAGCATGTCGAGAAGCT GTTGTTCAGAACAAACCAAGGCTAGTTGAAGCTATGTACTTCTGTGAATTGACCACACCA ACCGAACAACTGGGTGCGACATATGCAGTTCTTAGTAGGAAGCGAGCAAGGGTTCTGAAG GAGGAGATGCAAGAGGGAACTTCTTTATTTACTGTGCACGCATACTTACCAGTTGCTGAG AGCGTTGGATTTTCTAATGAGCTTAGGAGTGTAACAGCTGGTGCAGCCAGTGCTCTGCTT GTTCTTAGCCACTGGGAAGCTATTCCTGAGGACCCTTTCTTTATCCCAAAAACGCATGAG GAGATTGAAGAATTTGGAGATGGTTCCAGCATTGGGCCAAACTTAGCTAAGAAGCTTATG AATTCTGTCAGGCGAAGGAAGGGGCTTCATGTTGAAGAAAAAGTGGTTGAACATGGCACA AAGCAGAGGACGCTGGCGAAGAAGGTGTAG

Peptide Sequence

PEP ID	Os03t0650700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:25250967:25254279:1 gene:Os03g0650700 transcript:Os03t0650700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation elongation factor EFG/EF2, C-terminal domain containing protein. (Os03t0650700-01)
Sequence	MAAPADPRRVRNTCILAHVDHGKTTLADHLVASCGDGLVHPRLAGRLRFMDYLDEEQRRA ITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEGVHIQTHAAL RQAFLERLRPCLVLNKLDRLISELHLTPAEAYTRLHRIISDVNSIHSALRSHSYFSLLSS LEDQPSSASSSSPDELPEDVDEDEEDAFQPQKGNVVFACALDGWGFRIHQFAEFYAAKLP NINANALLKGLWGPRYFHKKKKMIVGKKGMEGGDAQPMFVEFVLKPLWQAYQGVLSENGE LVKKVITNFSLQVQQRELQNKDPKVVLQAVMSRWLPLADAVMTMVVECTPDPVAAQGVRV ARLMPKREVAPEDAAGSPDIVVDAERVRSCVEACDARADAPVVVYVSKMFAVPYKTLPFR GVDGELLNHQGANESEECFMAFARVFCGVLRAGQKVFVLSPLYDPMKGEAMQKHVQEVEL QYLYEMLGQGLRPVSSVCAGNVVAIQGLGHHILKSATLSSTKNCWPFSSMMFQVSPMLKV AIEPSNPADLGALVKGLKLLNRADPFVEYTVSQRGEHVLAAAGEIHLERCKKDLEERFAK VKLVVSDPLVSFKETIEGEGLALIESLKAPREFVERTTPNGRCTVRVQVLRLPNALIKVL EESEQLLGQIIEGKTAKRNGVLDPHLSQDDGDSAATLRQRLINAIDSELEAFSEQVDKEK LERYRNTWLGYLQRIWSLGPWQVGPNLLLLPDVKSSDSVITSQDGRQGILVRGRSHVSER LGFVCGSDAEANNDLDDSEPSADTPESLHLESVALRNCIVSGFQLATNAGPLCDEPMWGL VFVVEPYIFCDHSDAANHSEQYNIFSGQVITAVKEACREAVVQNKPRLVEAMYFCELTTP TEQLGATYAVLSRKRARVLKEEMQEGTSLFTVHAYLPVAESVGFSNELRSVTAGAASALL VLSHWEAIPEDPFFIPKTHEEIEEFGDGSSIGPNLAKKLMNSVRRRKGLHVEEKVVEHGT KQRTLAKKV

Transcript Sequence

Transcript ID	Os03t0650700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:25250967:25254279:1 gene:Os03g0650700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation elongation factor EFG/EF2, C-terminal domain containing protein. (Os03t0650700-01)
Sequence	ACGTTCAGCCCCAATCCCCAAAGGCCCGAGGAGCTGAAAATTCCGGAACCTTCGTCTCGC CGCCGGCGCCGCCCATCCCAAATTTTCCCCCACCCGAAAGCCCAAACCCTAATACCGCCG CCGCCGACGGCCACCGCAATGGCGGCGCCGGCGGACCCGCGGCGGGTACGCAACACGTGC ATCCTGGCGCACGTCGACCACGGCAAGACGACGCTGGCCGACCACCTCGTCGCCTCCTGC GGGGACGGCCTCGTCCACCCGAGGCTCGCGGGGCGCCTCCGCTTCATGGACTACCTCGAC GAGGAGCAGCGCCGCGCCATCACCATGAAGTCCGCCGCCGTCGTGCTCCACCACGGGGGC CACCGCGTCAACCTCATCGACTCCCCGGGCCACATCGACTTCTGCTCCGAGGTCTCCTCC GCCGCGAGGCTCTCCGACTCGGCGCTCATCCTCGTCGACGCCGTCGAGGGCGTCCACATC CAGACTCACGCCGCCCTCCGCCAGGCCTTCCTCGAGCGCCTCCGCCCCTGCCTCGTCCTC AACAAGCTCGACCGCCTCATCTCCGAGCTCCACCTCACCCCCGCCGAGGCCTACACCCGC CTCCACCGCATCATCTCCGACGTCAACTCCATCCACTCCGCCCTGCGATCCCACTCCTAC TTCTCCCTCCTCTCCTCCCTCGAGGACCAACCTTCCTCCGCCTCCTCTTCCTCGCCGGAC GAGCTCCCCGAGGACGTTGACGAAGACGAGGAGGACGCTTTCCAGCCGCAAAAGGGAAAT GTTGTCTTTGCCTGTGCCCTTGATGGCTGGGGCTTCCGCATTCACCAGTTTGCTGAGTTC TATGCCGCCAAGCTCCCCAACATCAACGCCAATGCCTTGCTGAAAGGGCTTTGGGGTCCA CGATACTTCCACAAGAAGAAGAAGATGATTGTGGGGAAGAAAGGGATGGAGGGCGGCGAC GCGCAGCCGATGTTTGTGGAGTTTGTCCTCAAGCCCCTTTGGCAGGCGTATCAGGGAGTG CTGAGCGAGAACGGTGAGTTGGTGAAGAAGGTCATTACAAACTTCAGTTTGCAAGTTCAG CAAAGAGAGCTGCAGAACAAGGACCCGAAGGTGGTTCTGCAGGCTGTGATGAGCCGCTGG CTGCCGCTCGCTGATGCGGTGATGACGATGGTGGTGGAATGCACGCCTGACCCTGTTGCA GCTCAAGGGGTCAGGGTTGCAAGGCTCATGCCAAAGAGGGAGGTTGCTCCAGAGGATGCT GCTGGTTCCCCTGATATTGTTGTGGATGCAGAGAGGGTCAGGAGCTGTGTGGAGGCCTGC GATGCGAGAGCAGATGCACCAGTGGTGGTGTATGTGTCGAAGATGTTTGCCGTGCCATAT AAAACGTTGCCATTCAGGGGTGTGGATGGGGAGCTGTTGAACCACCAAGGGGCCAATGAG TCTGAGGAGTGTTTTATGGCATTTGCAAGGGTCTTTTGTGGGGTCCTTCGTGCAGGGCAG AAGGTATTTGTGTTGTCACCACTGTATGATCCAATGAAAGGGGAGGCGATGCAGAAGCAT GTACAGGAAGTGGAGCTGCAATACTTGTATGAGATGCTTGGGCAGGGCCTGAGGCCAGTT TCTAGTGTGTGTGCTGGGAATGTGGTTGCAATCCAGGGACTTGGTCATCATATATTGAAG AGCGCCACATTGTCATCCACCAAAAATTGCTGGCCTTTCTCAAGTATGATGTTCCAGGTG TCTCCGATGCTTAAGGTTGCAATTGAGCCCTCCAACCCAGCAGATTTAGGAGCCCTTGTT AAAGGGCTTAAACTTCTTAACCGGGCAGATCCATTTGTTGAGTACACTGTCTCACAGAGA GGTGAGCATGTTCTTGCTGCAGCTGGGGAGATACATTTGGAGAGGTGTAAAAAGGATTTG GAGGAAAGATTTGCAAAGGTCAAATTGGTGGTCTCAGACCCCCTGGTGTCCTTTAAAGAG ACAATTGAAGGCGAAGGCCTTGCCTTGATAGAGAGCCTGAAGGCTCCACGGGAATTCGTT GAGAGAACTACTCCAAATGGGAGATGCACTGTGAGAGTTCAGGTTTTGAGACTTCCCAAT GCGCTCATTAAGGTTCTTGAAGAAAGTGAACAATTGCTTGGTCAAATAATTGAGGGGAAA ACAGCAAAGAGGAACGGCGTGTTGGATCCACATCTTTCTCAGGATGATGGTGATTCTGCT GCAACACTTAGGCAACGCCTGATCAATGCTATAGACAGTGAGTTGGAAGCATTTTCTGAG CAAGTGGATAAAGAAAAACTTGAGAGGTATAGAAATACATGGCTTGGATACCTCCAAAGA ATCTGGTCACTCGGTCCTTGGCAGGTTGGTCCAAACCTCCTTCTCTTGCCTGATGTGAAA TCAAGTGACAGTGTGATAACCAGTCAAGATGGAAGGCAAGGCATTCTTGTGCGTGGTAGA TCTCATGTCTCTGAGAGATTAGGATTTGTGTGTGGATCTGATGCTGAAGCTAACAATGAT CTTGATGACAGTGAACCATCAGCAGATACTCCTGAATCATTACATCTAGAATCTGTGGCT CTGAGGAACTGCATAGTATCAGGTTTTCAATTAGCAACAAATGCAGGGCCACTATGTGAT GAGCCCATGTGGGGTCTAGTATTTGTTGTTGAACCTTACATATTCTGTGACCACTCTGAT GCTGCAAATCACTCTGAACAGTACAACATCTTCAGTGGTCAAGTAATTACCGCTGTTAAG GAAGCATGTCGAGAAGCTGTTGTTCAGAACAAACCAAGGCTAGTTGAAGCTATGTACTTC TGTGAATTGACCACACCAACCGAACAACTGGGTGCGACATATGCAGTTCTTAGTAGGAAG CGAGCAAGGGTTCTGAAGGAGGAGATGCAAGAGGGAACTTCTTTATTTACTGTGCACGCA TACTTACCAGTTGCTGAGAGCGTTGGATTTTCTAATGAGCTTAGGAGTGTAACAGCTGGT GCAGCCAGTGCTCTGCTTGTTCTTAGCCACTGGGAAGCTATTCCTGAGGACCCTTTCTTT ATCCCAAAAACGCATGAGGAGATTGAAGAATTTGGAGATGGTTCCAGCATTGGGCCAAAC TTAGCTAAGAAGCTTATGAATTCTGTCAGGCGAAGGAAGGGGCTTCATGTTGAAGAAAAA GTGGTTGAACATGGCACAAAGCAGAGGACGCTGGCGAAGAAGGTGTAGTTATTTTGTATG TTTCAAATTTTGTCCTGATAGACCCAAATACTATAATCAAATACAGAATTCGATGTGACC ACATGGTTTTGTT