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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0648600-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:25135397:25136081:1 gene:Os03g0648600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os03t0648600-00)
Sequence

ATGATGGACGTCATGGACACCGAGGAGGCGGTTCACCTCGTGGTCGTCGGGGTGGTGGCC
GTGGGGGCGGTCGTCTTCCTCCTCGCCGCCGCCGCCTCGGGGGCGTGCGGTTGCGCCGCC
GCGTTCCCGGCCGCCCGGTGGAGGAAGAGGGCGCAGGTGGGCGACGACGACGACGATGTC
GAGAGCGCGCTCGGGGGCGCCACCACGGTCACGACGTACGAGCAGGCGGCGGCGGCGTCG
TCGTCTTCGCCGGCGGCAGGGGCAGCGGCGGAGGGAGCGGACACGTGCGCGATCTGCTGT
CAGGAATACTCCGGCGCCGACAAGGTGCGGCGGGTGGTGCGGTGCAGCCATTTCTTCCAC
GCGGGGTGCGTCGACGGTTGGCTCCGGGAGAAGCGGAATTGCCCGCTGTGCCGCGCCGTG
CTGTCGTCGTTGCCGCCGCTTCCCAACCCTGGCTGCCGCCGCGGACGAGCCGCCCCGCCG
TGTCCGCCGCCGCTGCCGCCACCGTTGTCGTCGGCTAATTACTTATCAGGATTTTGCAGA
TCTCATTTTGTTTTGGATTATTGA

Peptide Sequence

PEP ID

Os03t0648600-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:25135397:25136081:1 gene:Os03g0648600 transcript:Os03t0648600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os03t0648600-00)
Sequence

MMDVMDTEEAVHLVVVGVVAVGAVVFLLAAAASGACGCAAAFPAARWRKRAQVGDDDDDV
ESALGGATTVTTYEQAAAASSSSPAAGAAAEGADTCAICCQEYSGADKVRRVVRCSHFFH
AGCVDGWLREKRNCPLCRAVLSSLPPLPNPGCRRGRAAPPCPPPLPPPLSSANYLSGFCR
SHFVLDY

Transcript Sequence

Transcript ID

Os03t0648600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:25135397:25136081:1 gene:Os03g0648600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os03t0648600-00)
Sequence

CCCAGAAGCCTCTGCCTCGCCGCGACCGCGAACGCGGAGCGCGCGCCCCACACGGAGACG
ACGCGGCGGCCGCGGCGCGAACGCGCCCTGCAGGTTTGCTCGCGTACGCCGGTGTGGCGG
GATGATGGACGTCATGGACACCGAGGAGGCGGTTCACCTCGTGGTCGTCGGGGTGGTGGC
CGTGGGGGCGGTCGTCTTCCTCCTCGCCGCCGCCGCCTCGGGGGCGTGCGGTTGCGCCGC
CGCGTTCCCGGCCGCCCGGTGGAGGAAGAGGGCGCAGGTGGGCGACGACGACGACGATGT
CGAGAGCGCGCTCGGGGGCGCCACCACGGTCACGACGTACGAGCAGGCGGCGGCGGCGTC
GTCGTCTTCGCCGGCGGCAGGGGCAGCGGCGGAGGGAGCGGACACGTGCGCGATCTGCTG
TCAGGAATACTCCGGCGCCGACAAGGTGCGGCGGGTGGTGCGGTGCAGCCATTTCTTCCA
CGCGGGGTGCGTCGACGGTTGGCTCCGGGAGAAGCGGAATTGCCCGCTGTGCCGCGCCGT
GCTGTCGTCGTTGCCGCCGCTTCCCAACCCTGGCTGCCGCCGCGGACGAGCCGCCCCGCC
GTGTCCGCCGCCGCTGCCGCCACCGTTGTCGTCGGCTAATTACTTATCAGGATTTTGCAG
ATCTCATTTTGTTTTGGATTATTGA