Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0648400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:25127262:25129891:1 gene:Os03g0648400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein A4, YDJ1 protein description:Similar to DnaJ protein. (Os03t0648400-01);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-02);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-03);Non-protein coding transcript. (Os03t0648400-04)
Sequence	ATGTTCGGGCGCGCGCCGAAGAAGAGCGACAACACCAAGTACTACGAGATCCTGGGGGTC CCCAAGACCGCCTCCCAGGACGACCTCAAGAAGGCGTACCGCAAGGCCGCCATCAAGAAC CACCCCGACAAGGGCGGCGACCCCGAGAAGTTCAAGGAGCTTGCACAAGCTTATGAGGTA TTGAGTGACCCGGAGAAACGTGAAATCTATGACCAATATGGTGAAGATGCCCTCAAGGAA GGAATGGGTGGAGGCGGATCCCATGTTGATCCATTTGACATCTTTTCATCATTCTTTGGA CCTTCTTTTGGTGGTGGTGGCAGCAGCAGGGGCAGAAGGCAAAGGAGGGGAGAGGATGTG ATCCATCCGCTTAAGGTTTCTCTAGAAGATCTTTACAATGGTACTTCAAAGAAGCTCTCT CTTTCCCGCAATGTCCTCTGCGCCAAGTGCAAGGGCAAGGGTTCCAAGTCTGGTGCTTCC ATGAGGTGCCCAGGTTGCCAGGGGTCTGGCATGAAAATCACCATCCGCCAGCTGGGGCCT TCCATGATACAGCAGATGCAGCAGCCTTGCAATGAGTGTAAGGGGACTGGAGAGAGCATT AATGAGAAGGATCGCTGCCCAGGCTGCAAGGGCGAGAAGGTTATTCAGGAGAAGAAGGTT CTGGAGGTTCACGTTGAGAAGGGGATGCAACACAATCAGAAGATCACTTTCCCTGGTGAA GCTGATGAGGCG

Peptide Sequence

PEP ID	Os03t0648400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:25127262:25129891:1 gene:Os03g0648400 transcript:Os03t0648400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein A4, YDJ1 protein description:Similar to DnaJ protein. (Os03t0648400-01);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-02);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-03);Non-protein coding transcript. (Os03t0648400-04)
Sequence	MFGRAPKKSDNTKYYEILGVPKTASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV LSDPEKREIYDQYGEDALKEGMGGGGSHVDPFDIFSSFFGPSFGGGGSSRGRRQRRGEDV IHPLKVSLEDLYNGTSKKLSLSRNVLCAKCKGKGSKSGASMRCPGCQGSGMKITIRQLGP SMIQQMQQPCNECKGTGESINEKDRCPGCKGEKVIQEKKVLEVHVEKGMQHNQKITFPGE ADEA

Transcript Sequence

Transcript ID	Os03t0648400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:25127262:25129891:1 gene:Os03g0648400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein A4, YDJ1 protein description:Similar to DnaJ protein. (Os03t0648400-01);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-02);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-03);Non-protein coding transcript. (Os03t0648400-04)
Sequence	CTCTTTCTCTCCTCCCACTCCGCTAGCTCCGGCCACCAACTTTGACCCGTCCTCCTCCTC CGCATCCCCCATCCCCTCCTCCCCGGCGGCGGCGGCGGCGCGGAGGCGGCGGCACGGGAG CGGCTAGTGGTTTCGTCGGCGGAGGCGGAGGCGGGGCCAAGATGTTCGGGCGCGCGCCGA AGAAGAGCGACAACACCAAGTACTACGAGATCCTGGGGGTCCCCAAGACCGCCTCCCAGG ACGACCTCAAGAAGGCGTACCGCAAGGCCGCCATCAAGAACCACCCCGACAAGGGCGGCG ACCCCGAGAAGTTCAAGGAGCTTGCACAAGCTTATGAGGTATTGAGTGACCCGGAGAAAC GTGAAATCTATGACCAATATGGTGAAGATGCCCTCAAGGAAGGAATGGGTGGAGGCGGAT CCCATGTTGATCCATTTGACATCTTTTCATCATTCTTTGGACCTTCTTTTGGTGGTGGTG GCAGCAGCAGGGGCAGAAGGCAAAGGAGGGGAGAGGATGTGATCCATCCGCTTAAGGTTT CTCTAGAAGATCTTTACAATGGTACTTCAAAGAAGCTCTCTCTTTCCCGCAATGTCCTCT GCGCCAAGTGCAAGGGCAAGGGTTCCAAGTCTGGTGCTTCCATGAGGTGCCCAGGTTGCC AGGGGTCTGGCATGAAAATCACCATCCGCCAGCTGGGGCCTTCCATGATACAGCAGATGC AGCAGCCTTGCAATGAGTGTAAGGGGACTGGAGAGAGCATTAATGAGAAGGATCGCTGCC CAGGCTGCAAGGGCGAGAAGGTTATTCAGGAGAAGAAGGTTCTGGAGGTTCACGTTGAGA AGGGGATGCAACACAATCAGAAGATCACTTTCCCTGGTGAAGCTGATGAGGCG