Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0648300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:25116242:25124259:-1 gene:Os03g0648300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Calmodulin binding protein. (Os03t0648300-01)
Sequence	ATGGGTATTTCATCGAAGTGGTTTAAATCACTGGTTGGTATAAGAAAGCAAGAAAAGGCC CGGAATGCAGAAAAACAAGAAAAGGCACAAAATGCAGAGAGCTGCGAAACAAGCACCCCT GCTGCTCAGTTGCTTCACAAACGGAAACATTCTTTGGATACTGAACGTGCAATCTTAGTA GAAGAACTTGCAGTGCAAAGTGAACCATTGACTGATGACACCAACACGCAGACAGTTTCA GATTCCATTTCTTCAGACAGTACATTGCTTGGAGTACATATTTCTCAAACCGAAGAGCAT AAAACTAAAGAGGATGTGGCTGCAACACTCATTCAGTCTGCGTTTCGAGCATTCCTGGCT AGACGGGCTTTACGGGCATTGAAAGGAATAGTTATACTGCAGGCCCTTGTAAGGGGTCAT ATCATAAGAAAGCAGACATCAGAAACACTTCAGTGTATGCAAGCTCTAGTAAGAGCTCAA GCTCGTGTCAGAGCAAGACAAGTTCGTGTTTCTTTAGAGAACCAAGTTGCACGGAAGAAG GTCCCTGAACAAGATGATCATGAGAATCATGTTCGAGAAATTGAGGAACGCTGGTGTGGC AGTATTGGTTCTGTTGAAGAACTGCAAGCTAAAGTATTGAAAAGGCAGGAAGCTGCTGCT AAGCGTGAGAGAGCAATGGCATATGCTTTGACTCATCAGCGACAAGCAGGTTCCAGGCAA CAGAAACCTACAACTCCGCAAGGACTTGAACTTGATGACAGCCACTGGGGATCAAACTGG TTAGAGAGGTGGATGGCTGTACGTCCATGGGAGAACAGGTTGCTTGACAGTAACACCAAA GAAACTATGCCACTGTGTGATGATAAGCAGGATATGGAAACAAAGTCTCAGATCACACCA AAGGGGAAAGTTCAAGTTTCAAGTGCCCTTTCTAATGGTTCTAACAAGAAGAAAGGCATA AACCATAAAAAATCATATTCTGATGTAACTTGTGCTTCATTTGGACGGTCGCCAAATATA CCTTCAACATCTTTGGGATCATGCAAACAAAAGTCAAAGCTTTCAGATGAAGCTTTGGAA GAAGTCAGCTCCCAGCCAACAGATCTTGCGTCTTTGTCCACATGCCAACCAAAAGCCAAG CTTGTGCAAGCGAATACTCCAGTCAAGAAGTGGTTATCTCTGCCAACTAATGTTGGTGGG GGAGCAGCAAAGGGCGCGACCAACAGCAACTCGATTTGCAGATCCACCAGTGCCAAGTCT GATCCAAAACCACGGGCAAATGCTTCTAACCAATCCAGGAAGCAAGTTGAGTTGCAGGCC TGA

Peptide Sequence

PEP ID	Os03t0648300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:25116242:25124259:-1 gene:Os03g0648300 transcript:Os03t0648300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Calmodulin binding protein. (Os03t0648300-01)
Sequence	MGISSKWFKSLVGIRKQEKARNAEKQEKAQNAESCETSTPAAQLLHKRKHSLDTERAILV EELAVQSEPLTDDTNTQTVSDSISSDSTLLGVHISQTEEHKTKEDVAATLIQSAFRAFLA RRALRALKGIVILQALVRGHIIRKQTSETLQCMQALVRAQARVRARQVRVSLENQVARKK VPEQDDHENHVREIEERWCGSIGSVEELQAKVLKRQEAAAKRERAMAYALTHQRQAGSRQ QKPTTPQGLELDDSHWGSNWLERWMAVRPWENRLLDSNTKETMPLCDDKQDMETKSQITP KGKVQVSSALSNGSNKKKGINHKKSYSDVTCASFGRSPNIPSTSLGSCKQKSKLSDEALE EVSSQPTDLASLSTCQPKAKLVQANTPVKKWLSLPTNVGGGAAKGATNSNSICRSTSAKS DPKPRANASNQSRKQVELQA

Transcript Sequence

Transcript ID	Os03t0648300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:25116242:25124259:-1 gene:Os03g0648300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Calmodulin binding protein. (Os03t0648300-01)
Sequence	GTCTACTATTCTTTCTCTCCTCTCGCTGTTCCCGACGGAGGAAGGGTGGCAGTGGCACGC ACGCACGCCGGCCTCGCCTCAGCCTCGCCTCCTCGCGCGCGCGCGGCCGGACGGGAGGCA CACGGTGCGCGGCCGGCCGGCCTCATTCGCTCACCTCGTCATTGAACTATATAAAAAGGT TGTTTGTCATGGGTATTTCATCGAAGTGGTTTAAATCACTGGTTGGTATAAGAAAGCAAG AAAAGGCCCGGAATGCAGAAAAACAAGAAAAGGCACAAAATGCAGAGAGCTGCGAAACAA GCACCCCTGCTGCTCAGTTGCTTCACAAACGGAAACATTCTTTGGATACTGAACGTGCAA TCTTAGTAGAAGAACTTGCAGTGCAAAGTGAACCATTGACTGATGACACCAACACGCAGA CAGTTTCAGATTCCATTTCTTCAGACAGTACATTGCTTGGAGTACATATTTCTCAAACCG AAGAGCATAAAACTAAAGAGGATGTGGCTGCAACACTCATTCAGTCTGCGTTTCGAGCAT TCCTGGCTAGACGGGCTTTACGGGCATTGAAAGGAATAGTTATACTGCAGGCCCTTGTAA GGGGTCATATCATAAGAAAGCAGACATCAGAAACACTTCAGTGTATGCAAGCTCTAGTAA GAGCTCAAGCTCGTGTCAGAGCAAGACAAGTTCGTGTTTCTTTAGAGAACCAAGTTGCAC GGAAGAAGGTCCCTGAACAAGATGATCATGAGAATCATGTTCGAGAAATTGAGGAACGCT GGTGTGGCAGTATTGGTTCTGTTGAAGAACTGCAAGCTAAAGTATTGAAAAGGCAGGAAG CTGCTGCTAAGCGTGAGAGAGCAATGGCATATGCTTTGACTCATCAGCGACAAGCAGGTT CCAGGCAACAGAAACCTACAACTCCGCAAGGACTTGAACTTGATGACAGCCACTGGGGAT CAAACTGGTTAGAGAGGTGGATGGCTGTACGTCCATGGGAGAACAGGTTGCTTGACAGTA ACACCAAAGAAACTATGCCACTGTGTGATGATAAGCAGGATATGGAAACAAAGTCTCAGA TCACACCAAAGGGGAAAGTTCAAGTTTCAAGTGCCCTTTCTAATGGTTCTAACAAGAAGA AAGGCATAAACCATAAAAAATCATATTCTGATGTAACTTGTGCTTCATTTGGACGGTCGC CAAATATACCTTCAACATCTTTGGGATCATGCAAACAAAAGTCAAAGCTTTCAGATGAAG CTTTGGAAGAAGTCAGCTCCCAGCCAACAGATCTTGCGTCTTTGTCCACATGCCAACCAA AAGCCAAGCTTGTGCAAGCGAATACTCCAGTCAAGAAGTGGTTATCTCTGCCAACTAATG TTGGTGGGGGAGCAGCAAAGGGCGCGACCAACAGCAACTCGATTTGCAGATCCACCAGTG CCAAGTCTGATCCAAAACCACGGGCAAATGCTTCTAACCAATCCAGGAAGCAAGTTGAGT TGCAGGCCTGATTGCACATTCCCCTTTCCCTCTGACTTCGGTAAGTCATTTCTTATTTGC TGTCCTCCAGCTGTGCATGCTACTTCTATGTACATAATTTTTTTCCAAGAAAAGAATACT GTATCTTAGATCTTGGTTGGTGGTGTGTTTCGTATTTTTCTTGTGCACGGTTGTGGGTAT GTCGTGCCATATTTTTCTTTTGCATTTCCATCAGTTTTTTTACCCTCTTGTATGTTGTTG TGAGTTTTGAAAGAAGGAACTATGTTATGTCTG