Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0647600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:25069214:25074703:-1 gene:Os03g0647600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to Nf-Y-A subunit. (Os03t0647600-01)
Sequence	ATGCTGAGCTTCAAGCAGAGCCACGAGGGGTTCGGCCATGTCGCCGCCGCTGGAGCTGGA CCGCAGCAGCAGCAGCAGCCGTGGTGGGCGGGGTCGCAGCTGCTGTACGGGGAGGCGTCG CCGGAGGAGGCGGCGCTGCGCGACGGCGGCCAGTTCCAGGTCGTGCCCGGAGGCCGCGCC GCGCTGGATCCGGCGGCGCCGGAGCCGGAGAAGACGGCGGTGCCGGCGATGCCCAAGAGA GGAGGAGGAGGAGGGGCTCCTGAGGTGCTGAAATTCTCGGTGTTTTCAGGTAATTTGGAG CCGGGAGATACAGGAGAGAAGAACAGAGAGCACTCTGCCACTATTGCAATGCAATCGCCG TTGCCAGAATACAACGGCCATTTCGAGCTTGGTCTTGGTCAATCCATGGTCTCTCCCAAT TATCCTTGTATTGACCAATGCTATGGTCTTATGACCACCTACGCGATGAAATCAATGAGT GGCGGGCGAATGCTACTGCCGCTGAACGCGCCAGCCGATGCGCCGATCTATGTCAACGCG AAGCAGTACGAAGGCATCCTCCGCCGTCGCCGTGCCCGCGCCAAGGCCCAGAGGGAGAAC AGGCTGGTCAAAGGCAGGAAGCCCTACCTCCACGAGTCGCGCCACCGCCACGCCATGCGC CGGGCCAGAGGCTCCGGCGGCCGCTTCCTCAACACCAAGAAAGAAGCCACCGCCGCCGGA TGCGGCGGCAGCAGCAAGACGCCCCTCGCGTCCCTCGTCAGCCCCGCCGACGTAGCCCAT CGTCCAGGCTCCGGCGGCCGCGCGTCCAGCCTCTCCGGCTCCGACGTGTCGTCGCCGGGA GGCGTCATGTACGACCACCACCGCCACGACGACGCCGACGCGGCGGACCACTACAACAGC ATCGACCACCACCTCCGCACGCCGTTCTTCACCCCGCTCCCGATCATCATGGACAGCGGC GGCGGCGGCGGCGACCACGCCTCACACTCCGCCGCCGCCGTCGCCGCCCCCTTCAGGTGG GCGACGGCGGCCGGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGA

Peptide Sequence

PEP ID	Os03t0647600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:25069214:25074703:-1 gene:Os03g0647600 transcript:Os03t0647600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to Nf-Y-A subunit. (Os03t0647600-01)
Sequence	MLSFKQSHEGFGHVAAAGAGPQQQQQPWWAGSQLLYGEASPEEAALRDGGQFQVVPGGRA ALDPAAPEPEKTAVPAMPKRGGGGGAPEVLKFSVFSGNLEPGDTGEKNREHSATIAMQSP LPEYNGHFELGLGQSMVSPNYPCIDQCYGLMTTYAMKSMSGGRMLLPLNAPADAPIYVNA KQYEGILRRRRARAKAQRENRLVKGRKPYLHESRHRHAMRRARGSGGRFLNTKKEATAAG CGGSSKTPLASLVSPADVAHRPGSGGRASSLSGSDVSSPGGVMYDHHRHDDADAADHYNS IDHHLRTPFFTPLPIIMDSGGGGGDHASHSAAAVAAPFRWATAAGDGCCELLKA

Transcript Sequence

Transcript ID	Os03t0647600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:25069214:25074703:-1 gene:Os03g0647600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to Nf-Y-A subunit. (Os03t0647600-01)
Sequence	CAAAAGCAGCAGTGGCAGCAGCCACCACTTTGCACAAAAGAAGCAAAGTAAATGGATGGC CATCGCCGTTGAGGAAGGGTTGGTGGCCATCTAGAGAGAGAGAGAGAAACTAGAGAGAGA GAGGGGTGAGCAGCTGAGCTCTGCATCTATATACAGCACTGCATCTCTCTCTATTTCTCT CTCTATATATATCTCTATCTACAGTGGATTTTCTCTCTCCTCTCTCTCTCTTGCCGTTGC TGTTCGATACTGTTGTTGTCCTCTCGTGGCCATTATTAGATGGCCTCCTGCTGCTGAAAT GTGAGTGAGAGCTTTGCTTTGCTTGCTTGCTGGCTGGCTGGCTGGCTAGCTGGGGGTTGG CTTCCCCTCATCCTCGTGCATCATCCACTGTGCTCGGCTCAGCTGTCTGCCCTGTTCTTG CTTTGGTGGTTGGACGGTTAGCATCTTCCTCCTCAAGCTGAGATCCTTCTTGACGCCATT GGAGGGGTCGCTGTCGCCTGCGTCCTTGAGCCTCCCTGCTTTTCTTTTTCTCTCTCTCTC TCCTCGGCGAGGGAGACGACGACGACGGTGGCGGCGGCGATGCTGAGCTTCAAGCAGAGC CACGAGGGGTTCGGCCATGTCGCCGCCGCTGGAGCTGGACCGCAGCAGCAGCAGCAGCCG TGGTGGGCGGGGTCGCAGCTGCTGTACGGGGAGGCGTCGCCGGAGGAGGCGGCGCTGCGC GACGGCGGCCAGTTCCAGGTCGTGCCCGGAGGCCGCGCCGCGCTGGATCCGGCGGCGCCG GAGCCGGAGAAGACGGCGGTGCCGGCGATGCCCAAGAGAGGAGGAGGAGGAGGGGCTCCT GAGGTGCTGAAATTCTCGGTGTTTTCAGGTAATTTGGAGCCGGGAGATACAGGAGAGAAG AACAGAGAGCACTCTGCCACTATTGCAATGCAATCGCCGTTGCCAGAATACAACGGCCAT TTCGAGCTTGGTCTTGGTCAATCCATGGTCTCTCCCAATTATCCTTGTATTGACCAATGC TATGGTCTTATGACCACCTACGCGATGAAATCAATGAGTGGCGGGCGAATGCTACTGCCG CTGAACGCGCCAGCCGATGCGCCGATCTATGTCAACGCGAAGCAGTACGAAGGCATCCTC CGCCGTCGCCGTGCCCGCGCCAAGGCCCAGAGGGAGAACAGGCTGGTCAAAGGCAGGAAG CCCTACCTCCACGAGTCGCGCCACCGCCACGCCATGCGCCGGGCCAGAGGCTCCGGCGGC CGCTTCCTCAACACCAAGAAAGAAGCCACCGCCGCCGGATGCGGCGGCAGCAGCAAGACG CCCCTCGCGTCCCTCGTCAGCCCCGCCGACGTAGCCCATCGTCCAGGCTCCGGCGGCCGC GCGTCCAGCCTCTCCGGCTCCGACGTGTCGTCGCCGGGAGGCGTCATGTACGACCACCAC CGCCACGACGACGCCGACGCGGCGGACCACTACAACAGCATCGACCACCACCTCCGCACG CCGTTCTTCACCCCGCTCCCGATCATCATGGACAGCGGCGGCGGCGGCGGCGACCACGCC TCACACTCCGCCGCCGCCGTCGCCGCCCCCTTCAGGTGGGCGACGGCGGCCGGCGACGGC TGCTGCGAGCTCCTCAAGGCGTGACAGCCTTGAGGCGGGGATCTCCAGGCGTGCCCAGAG CTGCTGCTGATCGATCACCATCAGCTTTGGCTGCCTGTAGGCAAATCATTCTTGGCTCTT TACTTGCATTGGGGTTCTTGCAAGCAACTCTCCTCGTCACCTACCAAAACTGTCCCTGAA ACTTCTCTAGTGCTGGGGTCTCGATCAGGGATGATGATGTGATGGAGGAGAGGCTTACCC ATATGCCTGTAAATTATGGTTAGTGTTCTGATTAAGCAACTAGTAGTACTTGGTAATTAC TGGCTATGAATTAGTAGTATGGACTCTGGTGTCAGGTTGCTCTTTGTCTGAATAAACTGG AGTCGTTTGAAGCTTTGCAACAGCTGTGAGTGAAACTATGTGCTTGCTTGCTTG