Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0646300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:25003664:25007784:1 gene:Os03g0646300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 6 description:Similar to Cyclic nucleotide-gated channel A (Fragment). (Os03t0646300-01)
Sequence	ATGTCGTACGCGTCCGGTGGCGGCGGCGGCGGGGAGCTGGCGACGAAGCGGTCGGCGTTC CACATCGACTATGGGGGTGGCGTGTCACTGCGGCGGCTGGCGCAGCCGGAGGCCCTGGCG CGCGGGATGATCACGCAGGGGTCGGCGCAGCTGCGGACGCTGGGGCGGTCGCTGCGGACG GGGGCGGCCATGGCGGTGGTGTTCCAGGAGGACCTGAAGAACACCTCCCGCAAGATCTTC GACCCGCAGGACCGGCTGCTGGTGCGCCTGAACCGCAGCTTCGTGGTCTCCTGCATCGTC TCCATCGCCGTCGACCCGGTGTTCTTCTACGCGCCCCAGGTGACGGCGAACGGCGGCAAC CTGTGCGTGGGGATCAGCCGCGACCTGGCCATCTCCGCCAGCGTCGTGCGCACCGTCGTG GACCTCTTCTTCGCGGCGCGGATCGTGCTCCAGTTCCGGACCGCTTACATCGCTCCGTCG TCCCGCGTATTCGGCCGCGGCGAGCTCGTCATCGACACCGCCCAGATCGCCGCCCGGTAC TTCCGGCGGTTCTTCGCCGCCGACCTCCTCTCCGTGCTCCCGCTCCCGCAGATCGTGATC TGGAAGTTCCTCCACCGGTCCAAGGGCGCCGCCGTGCTGTCCACCAAGGACGCGCTCCTC ATCATCGTCTTCCTCCAGTACATCCCCCGCGTCGTCCGCATCTACCCTCTCTCCTCCGAG CTCAAGCGCACCAGCGGCGCCTTCGCCGAGTCCGCCTACGCCGGCGCCGCCTACTACCTC CTCTGGTACATGCTCGCCAGCCACATCGTGGGGGCATCGTGGTACTTGCTGTCGATCGAG AGGGTGAGCGATTGCTGGAAGAAGGCGTGCAACGAGTTCCCGGGATGCAACAAGATCTAC ATGTACTGCGGCAACGACCACCAAAAAGGGTTCCTCGAGTGGCGAACCATCACGCGGCAG TACATCAACGAGACGTGCGAGCCTAGGGACGGCGTCATGCCCTTCAACTACGGCATCTAC ACGCCGGCCGTCAGGTCCGACGTCATCAAGTCCAACGACTTCACCTCCAAGCTCCTCTAC TGCCTCTGGTGGGGCCTTGCCAACCTCAGCACGCTGGGGCAAGGGCTGCAGACGAGCATA TACACGGGGGAGGCGCTGTTCTCGATATTCCTGGCGACGTTCGGGCTGATCCTGATGGCG ATGCTGATCGGCAACATCCAGACGTACCTGCAGTCGATGACGGTGAGGCTGGAGGAGATG CGGGTGAAGCGGCGCGACTCGGAGCAGTGGATGCACCACCGCCTCCTCCCCCAGGAGCTC CGGGAGCGCGTCCGCCGCTACGACGCCTACAAGTGGGTCAACACCCGGGGCGTCGACGAG GAGGTCCTCGTCGCCAACCTCCCCAAGGACCTCCGCCGCGACATCAAGCGCCACCTCTGC CTCGGCCTCGTCCGCCGCGTCCCGCTCTTCGCCAACATGGACGAGCGCCTCCTCGACGCC ATCTGCGAGCGCCTCCGCCCCGCCCTCTACACCGAGCGCACCTTCATCATCCGCGAGGGC GACCCCGTCGACCAGATGCTCTTCATCATCCGCGGCTGCCTCGAGAGCATCACCACCGAC GGCGGCCGCTCCGGCTTCTTCAACCGCAGCCTCCTCGAGGAGAGCGACTTCTGCGGCGAG GAGCTCCTCACCTGGGCGCTCGACCCCAAGGCCGGCCTCTCCCTCCCCTCCTCCACCCGC ACCGTCAGGGCCCTCTCCGAGGTCGAGGCCTTCGCCCTCCACTCCGACGAGCTCAAGTTC GTGGCGGGGCAGTTCCGCCGGATGCACAGCAAGCAGGTGCAGCACACCTTCCGGTTCTAC TCCCAGCAGTGGCGGACGTGGGCGGCCACCTACATCCAGGCCGCCTGGAGGCGCCACCTC AAGCGGAGGGCGATCCGCTCGTCGACGGGGCTCAAGACCACCATGCTGGTGTCGCGCTTC GCCGCCAACGCCATGCGCGGCGTCCACCGGCAGCGATCCAGGCGGGCCGACGAGGTCCTC ATGATGCCCATGCCCAAGCCCTCCGAGCCTGATTTCGGCGCCGATTACTGA

Peptide Sequence

PEP ID	Os03t0646300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:25003664:25007784:1 gene:Os03g0646300 transcript:Os03t0646300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 6 description:Similar to Cyclic nucleotide-gated channel A (Fragment). (Os03t0646300-01)
Sequence	MSYASGGGGGGELATKRSAFHIDYGGGVSLRRLAQPEALARGMITQGSAQLRTLGRSLRT GAAMAVVFQEDLKNTSRKIFDPQDRLLVRLNRSFVVSCIVSIAVDPVFFYAPQVTANGGN LCVGISRDLAISASVVRTVVDLFFAARIVLQFRTAYIAPSSRVFGRGELVIDTAQIAARY FRRFFAADLLSVLPLPQIVIWKFLHRSKGAAVLSTKDALLIIVFLQYIPRVVRIYPLSSE LKRTSGAFAESAYAGAAYYLLWYMLASHIVGASWYLLSIERVSDCWKKACNEFPGCNKIY MYCGNDHQKGFLEWRTITRQYINETCEPRDGVMPFNYGIYTPAVRSDVIKSNDFTSKLLY CLWWGLANLSTLGQGLQTSIYTGEALFSIFLATFGLILMAMLIGNIQTYLQSMTVRLEEM RVKRRDSEQWMHHRLLPQELRERVRRYDAYKWVNTRGVDEEVLVANLPKDLRRDIKRHLC LGLVRRVPLFANMDERLLDAICERLRPALYTERTFIIREGDPVDQMLFIIRGCLESITTD GGRSGFFNRSLLEESDFCGEELLTWALDPKAGLSLPSSTRTVRALSEVEAFALHSDELKF VAGQFRRMHSKQVQHTFRFYSQQWRTWAATYIQAAWRRHLKRRAIRSSTGLKTTMLVSRF AANAMRGVHRQRSRRADEVLMMPMPKPSEPDFGADY

Transcript Sequence

Transcript ID	Os03t0646300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:25003664:25007784:1 gene:Os03g0646300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 6 description:Similar to Cyclic nucleotide-gated channel A (Fragment). (Os03t0646300-01)
Sequence	ATTTGGGGGAAATTTCTCCAACGAGAAGCTGTGGGTGATTAATGGCGTCGCCATGAATCC GATCAACCATCCAGGAGCACCATTAATGGCGGCTACGAGGTATTCGTGAGGTGGGCTTGG TGACGATCGACGAGAGAGTCCGAGGATGTCGTACGCGTCCGGTGGCGGCGGCGGCGGGGA GCTGGCGACGAAGCGGTCGGCGTTCCACATCGACTATGGGGGTGGCGTGTCACTGCGGCG GCTGGCGCAGCCGGAGGCCCTGGCGCGCGGGATGATCACGCAGGGGTCGGCGCAGCTGCG GACGCTGGGGCGGTCGCTGCGGACGGGGGCGGCCATGGCGGTGGTGTTCCAGGAGGACCT GAAGAACACCTCCCGCAAGATCTTCGACCCGCAGGACCGGCTGCTGGTGCGCCTGAACCG CAGCTTCGTGGTCTCCTGCATCGTCTCCATCGCCGTCGACCCGGTGTTCTTCTACGCGCC CCAGGTGACGGCGAACGGCGGCAACCTGTGCGTGGGGATCAGCCGCGACCTGGCCATCTC CGCCAGCGTCGTGCGCACCGTCGTGGACCTCTTCTTCGCGGCGCGGATCGTGCTCCAGTT CCGGACCGCTTACATCGCTCCGTCGTCCCGCGTATTCGGCCGCGGCGAGCTCGTCATCGA CACCGCCCAGATCGCCGCCCGGTACTTCCGGCGGTTCTTCGCCGCCGACCTCCTCTCCGT GCTCCCGCTCCCGCAGATCGTGATCTGGAAGTTCCTCCACCGGTCCAAGGGCGCCGCCGT GCTGTCCACCAAGGACGCGCTCCTCATCATCGTCTTCCTCCAGTACATCCCCCGCGTCGT CCGCATCTACCCTCTCTCCTCCGAGCTCAAGCGCACCAGCGGCGCCTTCGCCGAGTCCGC CTACGCCGGCGCCGCCTACTACCTCCTCTGGTACATGCTCGCCAGCCACATCGTGGGGGC ATCGTGGTACTTGCTGTCGATCGAGAGGGTGAGCGATTGCTGGAAGAAGGCGTGCAACGA GTTCCCGGGATGCAACAAGATCTACATGTACTGCGGCAACGACCACCAAAAAGGGTTCCT CGAGTGGCGAACCATCACGCGGCAGTACATCAACGAGACGTGCGAGCCTAGGGACGGCGT CATGCCCTTCAACTACGGCATCTACACGCCGGCCGTCAGGTCCGACGTCATCAAGTCCAA CGACTTCACCTCCAAGCTCCTCTACTGCCTCTGGTGGGGCCTTGCCAACCTCAGCACGCT GGGGCAAGGGCTGCAGACGAGCATATACACGGGGGAGGCGCTGTTCTCGATATTCCTGGC GACGTTCGGGCTGATCCTGATGGCGATGCTGATCGGCAACATCCAGACGTACCTGCAGTC GATGACGGTGAGGCTGGAGGAGATGCGGGTGAAGCGGCGCGACTCGGAGCAGTGGATGCA CCACCGCCTCCTCCCCCAGGAGCTCCGGGAGCGCGTCCGCCGCTACGACGCCTACAAGTG GGTCAACACCCGGGGCGTCGACGAGGAGGTCCTCGTCGCCAACCTCCCCAAGGACCTCCG CCGCGACATCAAGCGCCACCTCTGCCTCGGCCTCGTCCGCCGCGTCCCGCTCTTCGCCAA CATGGACGAGCGCCTCCTCGACGCCATCTGCGAGCGCCTCCGCCCCGCCCTCTACACCGA GCGCACCTTCATCATCCGCGAGGGCGACCCCGTCGACCAGATGCTCTTCATCATCCGCGG CTGCCTCGAGAGCATCACCACCGACGGCGGCCGCTCCGGCTTCTTCAACCGCAGCCTCCT CGAGGAGAGCGACTTCTGCGGCGAGGAGCTCCTCACCTGGGCGCTCGACCCCAAGGCCGG CCTCTCCCTCCCCTCCTCCACCCGCACCGTCAGGGCCCTCTCCGAGGTCGAGGCCTTCGC CCTCCACTCCGACGAGCTCAAGTTCGTGGCGGGGCAGTTCCGCCGGATGCACAGCAAGCA GGTGCAGCACACCTTCCGGTTCTACTCCCAGCAGTGGCGGACGTGGGCGGCCACCTACAT CCAGGCCGCCTGGAGGCGCCACCTCAAGCGGAGGGCGATCCGCTCGTCGACGGGGCTCAA GACCACCATGCTGGTGTCGCGCTTCGCCGCCAACGCCATGCGCGGCGTCCACCGGCAGCG ATCCAGGCGGGCCGACGAGGTCCTCATGATGCCCATGCCCAAGCCCTCCGAGCCTGATTT CGGCGCCGATTACTGATCAGCCGGCAAATGCATGTGAATTAGCGCTTATGAAATGGGTGT AAATTGTGAGTAAATGTTGTCGGATTTAGCTGTGCAGTGCAGTACTCCCTCCATTTGATA GTCATATTTCATCTTGGCACACAGACTAAGGATAAGTAATTCTACTTATCATCTATTTAA ATGTGCTACTAGTCATTCCTCGTAAACAAGTGATTCATTAATATTTACATTTCTCAATGC CCATGTAGCCAATCATGTGTGGAAGAATGAAGAGTCATGTATTAAATCCAAGAAAGTCAT TAAGATGATAAGTTGTTGGATTG