Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0646200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:25001670:25003485:-1 gene:Os03g0646200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os03t0646200-01)
Sequence	ATGCGCGCCCTCCTGCCGCGGCTGCCGCGGCGGCAGCGGCGGCCGGGGCCGGAGCTGCGC GTCCCGGCGAGGGGGCTCCTGGAGGCGCGGGTGCCGTGGGTGCGGGACCGGGCGCTGGAC CACGTGGTGGAGCGGGAGCGCCACCTGGTGCCGTTCCTGCTCGCCAAGGACGCGCTCCTC TCGGCGGCGCCGCCGCCGCACGCCGTGCCGCTCCACTCGCTGCCGTCCACCATCCCGTTC CCGTTCCGCCCGCTCCGCTTCCTCCGGCTCTACACGTCCGCCTTCGCGCTCTCGCCGCAC CCCGTCGCCGTCTCCCCGACGCCCCGCCTCGCGGGGATCCACTCCGCGGAGGCGCAGGTG CTCGACTCCACCCGCGCCGACGCCGCCGACCGCCTCCTGCGCCTCCTCATGCTGGCCCCG GCCCGCGCGCTCCCGCTCCACCTCGTCGCCCGCCTCCGCCTCGACCTCGGCCTCGCCCCC GACTTCCCCCGGTCGCTCCTCCCCAACTACCCGGACTACTTCGCGCTCTCCCGCGACGGC GCCCTCCTCGAGCTCGTCTGCTACCGGAAGGACCTTGCCGTGTCGGCAATGCAGTCCTAC GCGCAGCGCACCGGCGGGTACAAGGTCGGCGACGCGGTCCCCTTCCCGCTCTCGTTCCCG CGAGGGTTCGAGCTCGACAAGAAGGTGCGCAAGTGGCTCGACGACTGGCAGAGGCTGCCA TACATCTCGCCGTACGAGGACGGCTCACACCTGACACCGAGGAGCGACATCACGGAGAAG AGGACCGCGGCGGTGCTGCACGAGGTGCTGAGCCTCACCGTGGGGAAGAAGATGGAGAAG GAGGTGCTGGTGAAGCTCGGCGAGGCCCTGCGGCTGCCGCCGGGGTTCAGGAAGGTGTTG GCGAGGCACCCGGGGATCTTCTACTTATCTCACAAGCTGAGGACGCAGACGGTGGTGCTC CGGGAGTCATTCCGGCGGCATATGCTGGTCGACAAGCACCCGATGATGGGGATAAGGTAT CAGTACCTGCATTTGATGCATATGGGGCAGGAGGAGGCCGGGAAGCGCAAGGGCAAGGGT CGGAAGACAGTTCGCGGCGAGCAGATGATAGGGGAGGAGTTTGGTGCGGAGGGCGAGAAT GACGATGAAGAAGACGAAGAGTATGATGATGATGAGGAGGAAGACATGGAAGCTGGTGTT GCTTCTGGAGATGAGGACAGCGATGATGATGATGATGATGAGGAAGGTGAGAAGGAAGAT ATGGAAGCTGGTGTTGCTTCTAGAGATGAGGACAGTGATGATGAGGATGCGGATGATACC GATCACGCCGCAAAGGGATAG

Peptide Sequence

PEP ID	Os03t0646200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:25001670:25003485:-1 gene:Os03g0646200 transcript:Os03t0646200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os03t0646200-01)
Sequence	MRALLPRLPRRQRRPGPELRVPARGLLEARVPWVRDRALDHVVERERHLVPFLLAKDALL SAAPPPHAVPLHSLPSTIPFPFRPLRFLRLYTSAFALSPHPVAVSPTPRLAGIHSAEAQV LDSTRADAADRLLRLLMLAPARALPLHLVARLRLDLGLAPDFPRSLLPNYPDYFALSRDG ALLELVCYRKDLAVSAMQSYAQRTGGYKVGDAVPFPLSFPRGFELDKKVRKWLDDWQRLP YISPYEDGSHLTPRSDITEKRTAAVLHEVLSLTVGKKMEKEVLVKLGEALRLPPGFRKVL ARHPGIFYLSHKLRTQTVVLRESFRRHMLVDKHPMMGIRYQYLHLMHMGQEEAGKRKGKG RKTVRGEQMIGEEFGAEGENDDEEDEEYDDDEEEDMEAGVASGDEDSDDDDDDEEGEKED MEAGVASRDEDSDDEDADDTDHAAKG

Transcript Sequence

Transcript ID	Os03t0646200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:25001670:25003485:-1 gene:Os03g0646200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os03t0646200-01)
Sequence	GATCCGCTCATCTCGTCGTCGTCTTCGCCGCCGCCGACGCCGCACCCAAAACCCTCGCAA AACCGCAGCGAAAATGCGCGCCCTCCTGCCGCGGCTGCCGCGGCGGCAGCGGCGGCCGGG GCCGGAGCTGCGCGTCCCGGCGAGGGGGCTCCTGGAGGCGCGGGTGCCGTGGGTGCGGGA CCGGGCGCTGGACCACGTGGTGGAGCGGGAGCGCCACCTGGTGCCGTTCCTGCTCGCCAA GGACGCGCTCCTCTCGGCGGCGCCGCCGCCGCACGCCGTGCCGCTCCACTCGCTGCCGTC CACCATCCCGTTCCCGTTCCGCCCGCTCCGCTTCCTCCGGCTCTACACGTCCGCCTTCGC GCTCTCGCCGCACCCCGTCGCCGTCTCCCCGACGCCCCGCCTCGCGGGGATCCACTCCGC GGAGGCGCAGGTGCTCGACTCCACCCGCGCCGACGCCGCCGACCGCCTCCTGCGCCTCCT CATGCTGGCCCCGGCCCGCGCGCTCCCGCTCCACCTCGTCGCCCGCCTCCGCCTCGACCT CGGCCTCGCCCCCGACTTCCCCCGGTCGCTCCTCCCCAACTACCCGGACTACTTCGCGCT CTCCCGCGACGGCGCCCTCCTCGAGCTCGTCTGCTACCGGAAGGACCTTGCCGTGTCGGC AATGCAGTCCTACGCGCAGCGCACCGGCGGGTACAAGGTCGGCGACGCGGTCCCCTTCCC GCTCTCGTTCCCGCGAGGGTTCGAGCTCGACAAGAAGGTGCGCAAGTGGCTCGACGACTG GCAGAGGCTGCCATACATCTCGCCGTACGAGGACGGCTCACACCTGACACCGAGGAGCGA CATCACGGAGAAGAGGACCGCGGCGGTGCTGCACGAGGTGCTGAGCCTCACCGTGGGGAA GAAGATGGAGAAGGAGGTGCTGGTGAAGCTCGGCGAGGCCCTGCGGCTGCCGCCGGGGTT CAGGAAGGTGTTGGCGAGGCACCCGGGGATCTTCTACTTATCTCACAAGCTGAGGACGCA GACGGTGGTGCTCCGGGAGTCATTCCGGCGGCATATGCTGGTCGACAAGCACCCGATGAT GGGGATAAGGTATCAGTACCTGCATTTGATGCATATGGGGCAGGAGGAGGCCGGGAAGCG CAAGGGCAAGGGTCGGAAGACAGTTCGCGGCGAGCAGATGATAGGGGAGGAGTTTGGTGC GGAGGGCGAGAATGACGATGAAGAAGACGAAGAGTATGATGATGATGAGGAGGAAGACAT GGAAGCTGGTGTTGCTTCTGGAGATGAGGACAGCGATGATGATGATGATGATGAGGAAGG TGAGAAGGAAGATATGGAAGCTGGTGTTGCTTCTAGAGATGAGGACAGTGATGATGAGGA TGCGGATGATACCGATCACGCCGCAAAGGGATAGAGGTACCAAGCACAGGTCGAAGTTGG CGCTTGCATTCGAATTGGTCATCAAGATGATTTTGGTGGCAGTCTATCAACTCCATGAAT AATCACAGGTTGAAATTGGAGCTTGTGTTGCAAATGGGCTTCAAGATGATTTCGCTGACA GTCTGTCGCTCCATGAACACACAGGGAACAGTGAGCAACAGAATGTACAATCAAGTAATC AACTACCATGGTAGGCAGAAATCCTGTTTAAGAGGATTGAATGTTTGACTGCACTATCAA GCAGTTGATAGTTGAGTGCAAACATTCTTGTATTACCTGGATTCACTTCAGTTTTGTTTT TCCATACATGCCTTAGTTTGTTAAGTATTGTAATCTTATAATAGCCTGAATACATGAAGC TGGCTCATTTATTTTC