Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0643250-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:24804681:24807161:-1 gene:Os03g0643250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hydrolase-like protein. (Os03t0643250-00)
Sequence

ATGGAGTCGTCGTCGTCGGTCATCTTCCTGGGCACCGGCTGCTCCGGCGCGCTCCCCGAC
GCCCGGTGCCTCATCCACCCGTCCACGCCGCCGTGCCCCGTCTGCTCCCACTCCCTCTCC
CTCCCGCCGGAGCGAAACCCCAATTACAGGTGTAACACCTCCCTCTTGATAGATTACTGC
CAACATGATGGAATCCATAAGTACATTCTAATCGATGTCGGCAAGACATTTAGAGAACAA
GTTCTTCGGTGGTTTTCTCACCACAAGATTCCTTATGTTGATTCGATTATTCTCACTCAT
GAACACGCGGATGCTGTCTTAGGTCTTGATGATGTTTGGGTGGTACAACCAAGTGGTTGT
AGAAATGGCTTGGGCAAAGTTCCTATTTTTCTCACCCATTTCACAATGAACAGTGTTGCA
GCAAGATTCCCCTATTTATTGAAAAATAAGCTGGAGGAAGGTGATGAAGGTTCCCAAGTC
ATTCAACTCGACTGGACGATAATTGAGGGTGACATCGACAAACCATTTGTATCATCAGGA
TTAGAGTTTGTGCCCCTGCCAGTCATGCATGGAGAGGATTATGTTTGTTTAGGATTCCTA
TTTGGAAGGAGATCCAGAATTGCATATTTATCTGATGTCTCAAGAATTCTACCTAGAACT
GAGCATGCAATTTCGAAGTCTGGTGCCGGACAACTTGATCTTCTTATACTAGAAACGAAC
GAGTTGCACGGGGAGGGAGATGCTGGCAGTTGCCACCTTACTCTGAGTCAGACTCTTAAT
GCTGTCAAGAGAATAAGTCCTAAGAGAGCTCTGTTGATTGGAATGAACCATGAATTCGAA
CATCACAAAGAAAATCAGACGCTGGCAGAATGGTCTAGCAGAGAAGGAATACCAGTACAA
CTAGCTCACGATGGCCTGCGTGTGTTTATTGACCTGTAA

Peptide Sequence

PEP ID

Os03t0643250-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:24804681:24807161:-1 gene:Os03g0643250 transcript:Os03t0643250-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hydrolase-like protein. (Os03t0643250-00)
Sequence

MESSSSVIFLGTGCSGALPDARCLIHPSTPPCPVCSHSLSLPPERNPNYRCNTSLLIDYC
QHDGIHKYILIDVGKTFREQVLRWFSHHKIPYVDSIILTHEHADAVLGLDDVWVVQPSGC
RNGLGKVPIFLTHFTMNSVAARFPYLLKNKLEEGDEGSQVIQLDWTIIEGDIDKPFVSSG
LEFVPLPVMHGEDYVCLGFLFGRRSRIAYLSDVSRILPRTEHAISKSGAGQLDLLILETN
ELHGEGDAGSCHLTLSQTLNAVKRISPKRALLIGMNHEFEHHKENQTLAEWSSREGIPVQ
LAHDGLRVFIDL

Transcript Sequence

Transcript ID

Os03t0643250-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:24804681:24807161:-1 gene:Os03g0643250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hydrolase-like protein. (Os03t0643250-00)
Sequence

ATGGAGTCGTCGTCGTCGGTCATCTTCCTGGGCACCGGCTGCTCCGGCGCGCTCCCCGAC
GCCCGGTGCCTCATCCACCCGTCCACGCCGCCGTGCCCCGTCTGCTCCCACTCCCTCTCC
CTCCCGCCGGAGCGAAACCCCAATTACAGGTGTAACACCTCCCTCTTGATAGATTACTGC
CAACATGATGGAATCCATAAGTACATTCTAATCGATGTCGGCAAGACATTTAGAGAACAA
GTTCTTCGGTGGTTTTCTCACCACAAGATTCCTTATGTTGATTCGATTATTCTCACTCAT
GAACACGCGGATGCTGTCTTAGGTCTTGATGATGTTTGGGTGGTACAACCAAGTGGTTGT
AGAAATGGCTTGGGCAAAGTTCCTATTTTTCTCACCCATTTCACAATGAACAGTGTTGCA
GCAAGATTCCCCTATTTATTGAAAAATAAGCTGGAGGAAGGTGATGAAGGTTCCCAAGTC
ATTCAACTCGACTGGACGATAATTGAGGGTGACATCGACAAACCATTTGTATCATCAGGA
TTAGAGTTTGTGCCCCTGCCAGTCATGCATGGAGAGGATTATGTTTGTTTAGGATTCCTA
TTTGGAAGGAGATCCAGAATTGCATATTTATCTGATGTCTCAAGAATTCTACCTAGAACT
GAGCATGCAATTTCGAAGTCTGGTGCCGGACAACTTGATCTTCTTATACTAGAAACGAAC
GAGTTGCACGGGGAGGGAGATGCTGGCAGTTGCCACCTTACTCTGAGTCAGACTCTTAAT
GCTGTCAAGAGAATAAGTCCTAAGAGAGCTCTGTTGATTGGAATGAACCATGAATTCGAA
CATCACAAAGAAAATCAGACGCTGGCAGAATGGTCTAGCAGAGAAGGAATACCAGTACAA
CTAGCTCACGATGGCCTGCGTGTGTTTATTGACCTGTAATGAGG