Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0640800-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:24651848:24654879:-1 gene:Os03g0640800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEODOMAIN CONTAINING PROTEIN 4 description:Class III homeodomain Leu zipper (HD-Zip III) family member, Control of plant type architecture and leaf development (Os03t0640800-01);Similar to cDNA clone:J033124M18, full insert sequence. (Os03t0640800-02);Similar to cDNA clone:J033124M18, full insert sequence. (Os03t0640800-03)
Sequence	TGGATACTCCGTTACACTAGTGGTCTTGAGGATGGAAGTCTTGTGATCTGTGAGAGATCA TTGACTCAATCCACTGGTGGCCCATCAGGACCTAACACTCCAAACTTTGTCAGAGCCGAG GTGCTTCCTAGCGGCTATTTGATCCGCCCATGTGAGGGGGGTGGTTCCATGATTCACATT GTGGATCATGTTGATTTGGATGCTTGGAGTGTGCCTGAGGTCCTTAGACCACTTTATGAA TCTCCTAAGATCCTTGCGCAGAAGATGACAATTGCTGCACTGCGTCACATTAGGCAAATT GCACATGAATCAAGTGGGGAAATGCCCTATGGAGGGGGCCGTCAGCCAGCAGTTCTGAGA ACATTTAGTCAGAGGCTAAGCAGAGGCTTCAATGATGCTGTCAATGGATTCCCGGATGAT GGCTGGTCACTGATGAGCAGCGATGGTGCTGAGGATGTGACAATTGCTTTTAACTCATCT CCAAACAAGCTTGTTGGATCTCATGTCAACTCCTCCCAGCTGTTTTCTGCAATTGGAGGC GGCATCTTGTGTGCAAAGGCATCTATGCTGTTACAGAATGTACCACCTGCTCTCCTAGTG CGATTTTTGAGGGAGCACCGCTCTGAATGGGCTGATCCTGGTGTTGATGCTTATTCTGCT GCTGCGTTGAGGGCTAGTCCATATGCAGTTCCTGGTCTGCGAGCTGGTGGTTTTATGGGC AGTCAGGTTATATTGCCACTTGCGCACACCTTAGAGCATGAAGAGTTCCTGGAGGTCATT AGGCTTGAGGGACACAGCCTCTGCCATGATGAGGTCGTTCTATCAAGAGATATGTACCTT CTGCAGCTGTGCAGCGGTGTAGATGAAAATGCTGCGGGTGCATGTGCCCAGCTTGTCTTT GCACCCATTGACGAATCTTTTGCTGATGATGCACCACTGCTACCCTCAGGCTTCCGTGTG ATACCACTGGATGGCAAGACGGATGCACCATCTGCGACACGCACACTTGACCTGGCATCT ACTCTTGAGGTTGGATCGGGTGGGACTACACGGGCTTCTAGTGACACCTCGAGCACCTGC AACACAAGATCGGTCCTGACCATAGCTTTCCAATTCTCATATGAAAACCACCTTCGTGAA AGCGTAGCGGCAATGGCCAGGCAGTATGTCCGGACCGTGGTGGCATCAGTGCAGAGAGTG GCCATGGCAATAGCTCCTTCACGTCTTGGTGGACAGATTGAAACAAAGAACCCTCCAGGA TCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGATTCCACACTGGA GCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTCTTCCTTGAAAGCAATGTGGCAA CACTCTGATTCAATCATGTGCTGCTCCCTGAAGGCTGCTCCTGTGTTCACCTTCGCCAAC CAAGCCGGCCTCGACATGCTGGAGACGACGCTGATTGCTCTCCAGGACATCTCGCTCGAG AAGATCCTTGATGATGATGGCCGGAAGGCACTATGTACAGAGTTCCCCAAGATCATGCAG CAGGGTTTCGCCTACCTCCCGGGCGGCGTGTGCGTGTCGAGCATGGGGCGGCCGGTGTCG TACGAGCAGGCGGTGGCGTGGAAGGTCCTGAGCGACGACGACACGCCGCACTGCCTCGCC TTCATGTTCGTCAACTGGTCATTCGTCTGA

Peptide Sequence

PEP ID	Os03t0640800-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:24651848:24654879:-1 gene:Os03g0640800 transcript:Os03t0640800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEODOMAIN CONTAINING PROTEIN 4 description:Class III homeodomain Leu zipper (HD-Zip III) family member, Control of plant type architecture and leaf development (Os03t0640800-01);Similar to cDNA clone:J033124M18, full insert sequence. (Os03t0640800-02);Similar to cDNA clone:J033124M18, full insert sequence. (Os03t0640800-03)
Sequence	WILRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHI VDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLR TFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGG GILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMG SQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVF APIDESFADDAPLLPSGFRVIPLDGKTDAPSATRTLDLASTLEVGSGGTTRASSDTSSTC NTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPG SPEAHTLARWIGRSYRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVFTFAN QAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPVS YEQAVAWKVLSDDDTPHCLAFMFVNWSFV

Transcript Sequence

Transcript ID	Os03t0640800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:24651848:24654879:-1 gene:Os03g0640800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEODOMAIN CONTAINING PROTEIN 4 description:Class III homeodomain Leu zipper (HD-Zip III) family member, Control of plant type architecture and leaf development (Os03t0640800-01);Similar to cDNA clone:J033124M18, full insert sequence. (Os03t0640800-02);Similar to cDNA clone:J033124M18, full insert sequence. (Os03t0640800-03)
Sequence	CTGGATACTCCGTTACACTAGTGGTCTTGAGGATGGAAGTCTTGTGATCTGTGAGAGATC ATTGACTCAATCCACTGGTGGCCCATCAGGACCTAACACTCCAAACTTTGTCAGAGCCGA GGTGCTTCCTAGCGGCTATTTGATCCGCCCATGTGAGGGGGGTGGTTCCATGATTCACAT TGTGGATCATGTTGATTTGGATGCTTGGAGTGTGCCTGAGGTCCTTAGACCACTTTATGA ATCTCCTAAGATCCTTGCGCAGAAGATGACAATTGCTGCACTGCGTCACATTAGGCAAAT TGCACATGAATCAAGTGGGGAAATGCCCTATGGAGGGGGCCGTCAGCCAGCAGTTCTGAG AACATTTAGTCAGAGGCTAAGCAGAGGCTTCAATGATGCTGTCAATGGATTCCCGGATGA TGGCTGGTCACTGATGAGCAGCGATGGTGCTGAGGATGTGACAATTGCTTTTAACTCATC TCCAAACAAGCTTGTTGGATCTCATGTCAACTCCTCCCAGCTGTTTTCTGCAATTGGAGG CGGCATCTTGTGTGCAAAGGCATCTATGCTGTTACAGAATGTACCACCTGCTCTCCTAGT GCGATTTTTGAGGGAGCACCGCTCTGAATGGGCTGATCCTGGTGTTGATGCTTATTCTGC TGCTGCGTTGAGGGCTAGTCCATATGCAGTTCCTGGTCTGCGAGCTGGTGGTTTTATGGG CAGTCAGGTTATATTGCCACTTGCGCACACCTTAGAGCATGAAGAGTTCCTGGAGGTCAT TAGGCTTGAGGGACACAGCCTCTGCCATGATGAGGTCGTTCTATCAAGAGATATGTACCT TCTGCAGCTGTGCAGCGGTGTAGATGAAAATGCTGCGGGTGCATGTGCCCAGCTTGTCTT TGCACCCATTGACGAATCTTTTGCTGATGATGCACCACTGCTACCCTCAGGCTTCCGTGT GATACCACTGGATGGCAAGACGGATGCACCATCTGCGACACGCACACTTGACCTGGCATC TACTCTTGAGGTTGGATCGGGTGGGACTACACGGGCTTCTAGTGACACCTCGAGCACCTG CAACACAAGATCGGTCCTGACCATAGCTTTCCAATTCTCATATGAAAACCACCTTCGTGA AAGCGTAGCGGCAATGGCCAGGCAGTATGTCCGGACCGTGGTGGCATCAGTGCAGAGAGT GGCCATGGCAATAGCTCCTTCACGTCTTGGTGGACAGATTGAAACAAAGAACCCTCCAGG ATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGATTCCACACTGG AGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTCTTCCTTGAAAGCAATGTGGCA ACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGCTGCTCCTGTGTTCACCTTCGCCAA CCAAGCCGGCCTCGACATGCTGGAGACGACGCTGATTGCTCTCCAGGACATCTCGCTCGA GAAGATCCTTGATGATGATGGCCGGAAGGCACTATGTACAGAGTTCCCCAAGATCATGCA GCAGGGTTTCGCCTACCTCCCGGGCGGCGTGTGCGTGTCGAGCATGGGGCGGCCGGTGTC GTACGAGCAGGCGGTGGCGTGGAAGGTCCTGAGCGACGACGACACGCCGCACTGCCTCGC CTTCATGTTCGTCAACTGGTCATTCGTCTGAGAACCACCCTAGTAGAATCGATCCCCCCT CTTGTTTGTCTGTCCTAAAGACCTTATGTAGTATTGCTTTTGTGTATCATCACCATGAAC ATGTCAAGAACCTCCCCAGTTTCTATCATCATGAACTTCCGTTTGAATCTAGTACTGCTA AATGATCTATATGGT