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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0640400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:24638186:24641449:-1 gene:Os03g0640400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LO9-177 description:KxDL motif-containing protein, Component of HLH-bHLH protein complex, Control of leaf angle and grain size (Os03t0640400-01)
Sequence

ATGGAGAAGTCGCCGCCGGAGACAGCCGCGGCGGCCGCGGAGGTGGCGGCGCGGTTCAGG
TCGCTGGTCGACACCGGGGACATCGGCGCCATCAGGCAGACGCAGCACCTCATACTGGGA
CGGTTGCAAGATAGCAATGCAGTTCTCACACATTTTAACGAGTACTCTGAACAATGCTTT
GCGGAGGTGTCTAATGACTTTGCTAGTAAAACTCGTCTTCTCAAATCCATGAAGGACGAT
CTTGACCATATTTTCTTGAAGCTGAGAAGCATGAAATCGAGGCTAGCGGCAACATATCCA
GATGCTTTTCCCGATGGTGCAATGGCAAAAACGATGGACCAAAGACCGGACCTTGAAAGT
CCGCTTGATTAA

Peptide Sequence

PEP ID

Os03t0640400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:24638186:24641449:-1 gene:Os03g0640400 transcript:Os03t0640400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LO9-177 description:KxDL motif-containing protein, Component of HLH-bHLH protein complex, Control of leaf angle and grain size (Os03t0640400-01)
Sequence

MEKSPPETAAAAAEVAARFRSLVDTGDIGAIRQTQHLILGRLQDSNAVLTHFNEYSEQCF
AEVSNDFASKTRLLKSMKDDLDHIFLKLRSMKSRLAATYPDAFPDGAMAKTMDQRPDLES
PLD

Transcript Sequence

Transcript ID

Os03t0640400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:24638186:24641449:-1 gene:Os03g0640400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LO9-177 description:KxDL motif-containing protein, Component of HLH-bHLH protein complex, Control of leaf angle and grain size (Os03t0640400-01)
Sequence

GAGACTCGATAGGGGAGAGGAGGGCTCAGGCGGCCATGGAGAAGTCGCCGCCGGAGACAG
CCGCGGCGGCCGCGGAGGTGGCGGCGCGGTTCAGGTCGCTGGTCGACACCGGGGACATCG
GCGCCATCAGGCAGACGCAGCACCTCATACTGGGACGGTTGCAAGATAGCAATGCAGTTC
TCACACATTTTAACGAGTACTCTGAACAATGCTTTGCGGAGGTGTCTAATGACTTTGCTA
GTAAAACTCGTCTTCTCAAATCCATGAAGGACGATCTTGACCATATTTTCTTGAAGCTGA
GAAGCATGAAATCGAGGCTAGCGGCAACATATCCAGATGCTTTTCCCGATGGTGCAATGG
CAAAAACGATGGACCAAAGACCGGACCTTGAAAGTCCGCTTGATTAAAACAGCTTATCAT
TTTGACTGAGATCTCCGGTTGAGTCCTTCTGTACTCATCTTGAAGAAGAATGTTTTGTCT
GCACTTTTGCCGAAAATGTATCTTTGAGAAACGTCTGCTTCTGTTTATTAAGTTGTGTAA
CCTTGTAGTCCTATGTTTTTTAGATAATGGATAAGTTATAACCTTGTAAATAACTGTTCT
CTCTAGATCAGCCTCTCTCACACACTTTTGTGTGGTAAAAACTTGTTGGATCATAGCTAC
TGTATTTCCATCGATTTTTTTTTAAAAATAATTTTGTTATGCAACT