Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0633500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:24198649:24202021:-1 gene:Os03g0633500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA11 description:A member of Aux/IAA family protein, Regulation of lateral root initiation (Os03t0633500-01)
Sequence

ATGGCTGGCCTCGGGTTCGACGAGACCGAGCTCCGGCTCGGCCTTCCCGGCGCCGGCGAG
CTGGCAGCGAGGAGCTCCGGCAAGAGGGGCTTCGCCGAGACCATCGACCTCAAGCTCAAG
CTGCAGCCGGCGGCGCCTGCTGCCGTCTCTGGGGAAGAGGGTGCTCAGGAGGACAAGGAA
GATGCCGACGCGGCGGCGGCGGCCGCCGACGAGAAGATGTCGATGAAGAGGTCGGCGAGC
CAGAGCAGCGTGGTCACCGCGGAGCCCGATCCCGACAAGCCGCGCGCGCCCAAGGCGCAG
GTGGTGGGGTGGCCGCCGGTCCGGTCGTTCAGGAAGAACGTGCTCGCCGAGAAATGCAAG
GCGGCGGCGCTGGTGAAGGTGAGCATGGACGGCGCGCCGTACCTGAGGAAGATCGACGTC
GCCATGTACAAGAGCTACCCGGAGTTGTCCATGGCGTTCCAGAACATGTTCACCTCCTTC
ACCATCGGCAAGTGTGGGTCCCATCAGCAGCTGAAGGAGAGCAATAAGCTGAGAGATGAC
CTGGAGTACGTGCCGACGTACGAGGACAAGGACGGCGACTGGATGCTCGTCGGCGACGTC
CCGTGGGAGATGTTCGTCGAGTCGTGCAAACGCCTCCGAATCATGAAAGGGTCTGAAGCC
ATTGGCCTTGCACCAAGGGCAGTGGAGAAATGCAAGAGCTGA

Peptide Sequence

PEP ID

Os03t0633500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:24198649:24202021:-1 gene:Os03g0633500 transcript:Os03t0633500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA11 description:A member of Aux/IAA family protein, Regulation of lateral root initiation (Os03t0633500-01)
Sequence

MAGLGFDETELRLGLPGAGELAARSSGKRGFAETIDLKLKLQPAAPAAVSGEEGAQEDKE
DADAAAAAADEKMSMKRSASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRKNVLAEKCK
AAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQQLKESNKLRDD
LEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKS

Transcript Sequence

Transcript ID

Os03t0633500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:24198649:24202021:-1 gene:Os03g0633500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA11 description:A member of Aux/IAA family protein, Regulation of lateral root initiation (Os03t0633500-01)
Sequence

CGAATATGGCTGGCCTCGGGTTCGACGAGACCGAGCTCCGGCTCGGCCTTCCCGGCGCCG
GCGAGCTGGCAGCGAGGAGCTCCGGCAAGAGGGGCTTCGCCGAGACCATCGACCTCAAGC
TCAAGCTGCAGCCGGCGGCGCCTGCTGCCGTCTCTGGGGAAGAGGGTGCTCAGGAGGACA
AGGAAGATGCCGACGCGGCGGCGGCGGCCGCCGACGAGAAGATGTCGATGAAGAGGTCGG
CGAGCCAGAGCAGCGTGGTCACCGCGGAGCCCGATCCCGACAAGCCGCGCGCGCCCAAGG
CGCAGGTGGTGGGGTGGCCGCCGGTCCGGTCGTTCAGGAAGAACGTGCTCGCCGAGAAAT
GCAAGGCGGCGGCGCTGGTGAAGGTGAGCATGGACGGCGCGCCGTACCTGAGGAAGATCG
ACGTCGCCATGTACAAGAGCTACCCGGAGTTGTCCATGGCGTTCCAGAACATGTTCACCT
CCTTCACCATCGGCAAGTGTGGGTCCCATCAGCAGCTGAAGGAGAGCAATAAGCTGAGAG
ATGACCTGGAGTACGTGCCGACGTACGAGGACAAGGACGGCGACTGGATGCTCGTCGGCG
ACGTCCCGTGGGAGATGTTCGTCGAGTCGTGCAAACGCCTCCGAATCATGAAAGGGTCTG
AAGCCATTGGCCTTGCACCAAGGGCAGTGGAGAAATGCAAGAGCTGAAGCTGATCAAGGA
GAATTAATTAGCGCCGCATCCAGATTTATTAATTTTCACGGATATTATATTATATTATAT
TATATTATATTATATTATATTGCATGCATGCTTTGCTCCTCCCTGTATTATACTAGTATC
AAGTAATTAGTTTACTGTAATTCAGTGTCAGTTAAGCCTGTGTCATCTCAGTTTTTCTAA
GGGATTTTGATGTATTTACATGTGGGTTAGCTCCATCTTGTTATGCTCATGGAGTATATA
TATACGTAACAACAATG