Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0632800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:24174355:24180456:-1 gene:Os03g0632800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to Zinc finger, C3HC4 type (RING finger) containing protein. (Os03t0632800-01)
Sequence	ATGCAGCCCGCCCCCGCGTCGCCGCCCAAGGCCGACGGCGGCGAGGACGAGGAGGAGGAG TGCTCCAGGGCCGTGGTGAAGGAGGAGCCGCACCACCAGCAGGAGGAGGACGACGACGAT GCGGCTGCGGCTGCGGATGGAGGGGAGGATGAGAAGGAGAAAGTGGAGGAGGAGGAGGTG GAGGAGCGGGGGAGGAGGAGGAGGGGCAGGCCGGGGAGGAAGAGGGGGAGGCGAAGCGGC GGCGGCGGTGGTTCGGCTGCGGCTGCGGCGGCGGCGAGAGGAGGGGTGGTGATGGTGAAG CGGGAGCTGCTCGCGAGGTGCATGACGTGCCCGCTCTGCGGCCGCCTCCTCCGCGACGCC ACCACCGTCTCCGAGTGCCTCCACACCTTTTGCAGAAAGTGTATATATGAGAAGTTGAAT GATGAGGAGGTAGAATCCTGCCCAGTATGTAAAATTGATCTTGGCTGCACTCCAGTTGAA AAGCTTAGGGCTGATCACAATCTACAAGATGTAAGGTCAAAAATATTTCCATTCAAAAGA AAGAAGATTAGTGCTGACGAAGTAGCAGCTCCTGTTTTACTTCCCAGTAAAAGGAAAGAG AGATCTATCTCTTCTCTGGTAGTTGATACGCCTACAGTAACACCGACAGGCTTGACAGGG CGACGGACAAGAGCAGTTACCAGGAAAGCTGCTGCCTTGCGTGGCCTTGGTCCTGGTATT GATGATCCTGTGAAAAAGGAAATTGATAATGGTGAAAAGCATGCTCAGAATTCAAGCTTG CCCACTAATTTGGGCAAAGTGCCACAAACAAGAAGACAGATGTCATCAAACGCAGAGGCA TCGAACCATTCCTCCAATAAAGATACCGAAGGTGATCGCAAGGACCTGGCCGATAAGACT GATGAGCTCTGGAGACCTTTAAATTGTTTGGTAGAAGCTGCAAACAGGACAAAGTCCTCC CGATCAAGTTCACAGAGTCCATTTGTTAAGAGAGAGCAACTTAGTGACTCTCCTGGGAGC ACATCTGTTAACAAAACAAAGTCTAGGGAATATATGCAGAAATCCAAAATAGAGGATGAT AAGAAAGATGTACCTTTGCTAAAAAGGAAAAACCAAAGGACTGGACGGAGGAGAGAACTT CATGCCCAATCTGATAGTAAGCCTGAAGCTGCAGCTACACAAAACGAAAAGAAATTCAGT TCTATATGGTTTTCACTTGTTGCATCATTTGAACAGGAAGGAGACCCACCTTTACCACAG ATACCTTCCCATTATTTGCGAATAAACTGGCAGATCTGA

Peptide Sequence

PEP ID	Os03t0632800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:24174355:24180456:-1 gene:Os03g0632800 transcript:Os03t0632800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to Zinc finger, C3HC4 type (RING finger) containing protein. (Os03t0632800-01)
Sequence	MQPAPASPPKADGGEDEEEECSRAVVKEEPHHQQEEDDDDAAAAADGGEDEKEKVEEEEV EERGRRRRGRPGRKRGRRSGGGGGSAAAAAAARGGVVMVKRELLARCMTCPLCGRLLRDA TTVSECLHTFCRKCIYEKLNDEEVESCPVCKIDLGCTPVEKLRADHNLQDVRSKIFPFKR KKISADEVAAPVLLPSKRKERSISSLVVDTPTVTPTGLTGRRTRAVTRKAAALRGLGPGI DDPVKKEIDNGEKHAQNSSLPTNLGKVPQTRRQMSSNAEASNHSSNKDTEGDRKDLADKT DELWRPLNCLVEAANRTKSSRSSSQSPFVKREQLSDSPGSTSVNKTKSREYMQKSKIEDD KKDVPLLKRKNQRTGRRRELHAQSDSKPEAAATQNEKKFSSIWFSLVASFEQEGDPPLPQ IPSHYLRINWQI

Transcript Sequence

Transcript ID	Os03t0632800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:24174355:24180456:-1 gene:Os03g0632800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to Zinc finger, C3HC4 type (RING finger) containing protein. (Os03t0632800-01)
Sequence	ACGAGCCCACGAACCCACACGCAGGAGGAAGGAGGCCACGACGCAGCGCAGCGCGTCTGC GCTTCTCCACCTCCCCCCTCCACCTCGACCTCGATCTCCCCTCCCCTCCGCTGGCCATGC AGCCCGCCCCCGCGTCGCCGCCCAAGGCCGACGGCGGCGAGGACGAGGAGGAGGAGTGCT CCAGGGCCGTGGTGAAGGAGGAGCCGCACCACCAGCAGGAGGAGGACGACGACGATGCGG CTGCGGCTGCGGATGGAGGGGAGGATGAGAAGGAGAAAGTGGAGGAGGAGGAGGTGGAGG AGCGGGGGAGGAGGAGGAGGGGCAGGCCGGGGAGGAAGAGGGGGAGGCGAAGCGGCGGCG GCGGTGGTTCGGCTGCGGCTGCGGCGGCGGCGAGAGGAGGGGTGGTGATGGTGAAGCGGG AGCTGCTCGCGAGGTGCATGACGTGCCCGCTCTGCGGCCGCCTCCTCCGCGACGCCACCA CCGTCTCCGAGTGCCTCCACACCTTTTGCAGAAAGTGTATATATGAGAAGTTGAATGATG AGGAGGTAGAATCCTGCCCAGTATGTAAAATTGATCTTGGCTGCACTCCAGTTGAAAAGC TTAGGGCTGATCACAATCTACAAGATGTAAGGTCAAAAATATTTCCATTCAAAAGAAAGA AGATTAGTGCTGACGAAGTAGCAGCTCCTGTTTTACTTCCCAGTAAAAGGAAAGAGAGAT CTATCTCTTCTCTGGTAGTTGATACGCCTACAGTAACACCGACAGGCTTGACAGGGCGAC GGACAAGAGCAGTTACCAGGAAAGCTGCTGCCTTGCGTGGCCTTGGTCCTGGTATTGATG ATCCTGTGAAAAAGGAAATTGATAATGGTGAAAAGCATGCTCAGAATTCAAGCTTGCCCA CTAATTTGGGCAAAGTGCCACAAACAAGAAGACAGATGTCATCAAACGCAGAGGCATCGA ACCATTCCTCCAATAAAGATACCGAAGGTGATCGCAAGGACCTGGCCGATAAGACTGATG AGCTCTGGAGACCTTTAAATTGTTTGGTAGAAGCTGCAAACAGGACAAAGTCCTCCCGAT CAAGTTCACAGAGTCCATTTGTTAAGAGAGAGCAACTTAGTGACTCTCCTGGGAGCACAT CTGTTAACAAAACAAAGTCTAGGGAATATATGCAGAAATCCAAAATAGAGGATGATAAGA AAGATGTACCTTTGCTAAAAAGGAAAAACCAAAGGACTGGACGGAGGAGAGAACTTCATG CCCAATCTGATAGTAAGCCTGAAGCTGCAGCTACACAAAACGAAAAGAAATTCAGTTCTA TATGGTTTTCACTTGTTGCATCATTTGAACAGGAAGGAGACCCACCTTTACCACAGATAC CTTCCCATTATTTGCGAATAAACTGGCAGATCTGATTATGGCTATTCCACACTGTGTTTT ACAATAGAGATGGAAACATACCTGCCTCGTCAATCCAGAAGTACCTCATGCAGAAGCTTG GCCTTCCTAACGAGGCAGAGGTCGAAATAAATTGCTGCGGGCAGCCAGTGAACCCTACAC AACCCCTGTGCAATTTAGTAGAGGTGTGGTTGAGGGGGCGATCAACACAGACAACACAGA CCATGATAGGCTCCCCTGCCAAGGAGTTTGTAATGGTGCTAACTTATGGGCGGCCAAAGG CCATCACGCCATGAATGGCACCACAAACACAAGGCTCAAGCCATTTTTCGCCTAGAGGCG GGTCCCGTTTCCTGCCATTTTATTGGGCCCATGGAAGAAGAGGTGATCCGAGATAAACCT CCTTGATACATACATAGCCTCACAAGTCACAATGCGGTTGGCTCACTTGGCAGCCAGCCC TTGGCGTCACATTCATATGCATTCATTGATGTTATTCGATTCCATTAAGATTGTCTTTTT CTTCATTATTTATATTATACAAAAAGGTGTGTAAAGATTAGCAGAAAAAAGGCTGTTGTG AATTATCTGTATACCTGTAGTCATTATTGCTGTTTAGGTTGGTTATAAAGAGTCTATATG TATGAGATGAC