Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0628800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:23989148:23997520:1 gene:Os03g0628800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1flk (Fragment). (Os03t0628800-01)
Sequence	ATGTTTTCATCTGCAGCCATGCAGCAGCTCAAAGACGATGGGTCGTCCGCGAGGCAGCTA CAGCTGCTCGTCGCCGCGCTGTCGACGGCCGGAGCTGTGGCGGCCGCCGCCGTCGTGCGA CGCAGGCACGGGAGGAAGGCCGCCGCAGCCGCAGCCGCAGCCGCCGCGGCGCCGCCGCCG GTGGTGATGAGGGAAATGCCGAGGCTGGTGATGGCGGAGTCCGGCCGCGTCGAGCACATC GAGAAGTTCTCTCACTACGTCGCTAGGCAGATGGGGTTTCAGGACATAAATGAGTGCCCA CAGCTGTGCAAATTAGCAAATAACTACCTCAAGAGGACCAAGAATTGCATGGATGACATC GATGACTTCTTCGCAAATATCCTGGATTCGGAGTCCCTTTATGTCAAGTTCATAGAAGAG TTGGATAAATGCATTCTTGGATATTTTGCGTTCCATTGGGACCATGCTACCGCTCTTATC AGCCAGGCCTTGACCGTAGACTGTGGCACCGCCAGCAAGAAGAAGCTAAGGAACCTCGTG TTGGAAGCTACAAGGAAGCAGAGGTTTGAGCGGGTGACGAGGGACCTGAAGGTGACGAGG GTGTTCTCGACGCTGGTGGAGGAGATGAAGGCGATCGGCGTCCCGACGGCGGCGATGAAC GGCGACGGCGAGGAGGAGCCGCACTGCACCGACGTGATGGCGCCGGTGGCGCACGACGAG CGGAGCCCCGTGCTGCTGCTCATGGGCGGTGGGATGGGCGCCGGCAAGAGCACCGTGCTC AAGGAGATTCTCCAGGAGCCACTGTGGTCCAAGGACGAGGCGAATGCGGTGGTGGTTGAG GCGGATGCGTTCAAGGAGACGGACGTGATCTACCGTGCCATTAGCTCCATGGGCCACCAC AACGACATGCTCCAGACTGCTGAGCTGGTGCACCAGTCGTCGACGGACGCGGCGTCGTCG CTGCTGGTGACGGCGCTGAACGAGGGTCGTGACGTCATCCTCGACGGTACCCTCTCCTGG GAGCCGTTCGTCCAGCAGACCATCGCCATGGCGCGCGACGTCCACCGCCGCCGCTACCGC ATGGGCCCCGGCTACAAGGTCGACCCCGACACCGGCGACATCACCGAGAACTACTGGGAG CCCGCCGACGCCGACGCCGCCTCGCCGCCGCCGACCAGGAAGCCTTACCGGATCGAGGTC GCCGGCGTGGTCTGCGACGCGTACCTCGCCGTGGCGAGGGGGATCCGGCGCGCCATCGTG ACGGGGCGGGCGGTGCGGGTGCGGTCGCAGCTGGTGTCGCACAGGCGGTTCGCCGCCGCG TTCCGGCGGTACGCCGGCGCCGTGGACGGCGCGCGGCTGTACAGCACCAACACCATGGGC GCGGCGCGGCTGATCGCGCGCAAGGACGGCGTCGCCGGCAGCCTGCTGGTGGAGCCGGCG GAGTTCGCGTGCCTCGACGCGGTGGGCGGCCTCAACGAGAACGCCACCGGGGTGCACGAC CTCTACCGCGGCGGCGCCACCGCCTGCGGCGCCCGCTCCATCTGGGACGACATGATCGCC TCGCCGGCGCGCGCCGACATCCAGAGGGAGCTCCGGGAGGCCTTCCGCTCCGTGGAGCAC GCGCCGCCGAACACCAATGGCGCCTAG

Peptide Sequence

PEP ID	Os03t0628800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:23989148:23997520:1 gene:Os03g0628800 transcript:Os03t0628800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1flk (Fragment). (Os03t0628800-01)
Sequence	MFSSAAMQQLKDDGSSARQLQLLVAALSTAGAVAAAAVVRRRHGRKAAAAAAAAAAAPPP VVMREMPRLVMAESGRVEHIEKFSHYVARQMGFQDINECPQLCKLANNYLKRTKNCMDDI DDFFANILDSESLYVKFIEELDKCILGYFAFHWDHATALISQALTVDCGTASKKKLRNLV LEATRKQRFERVTRDLKVTRVFSTLVEEMKAIGVPTAAMNGDGEEEPHCTDVMAPVAHDE RSPVLLLMGGGMGAGKSTVLKEILQEPLWSKDEANAVVVEADAFKETDVIYRAISSMGHH NDMLQTAELVHQSSTDAASSLLVTALNEGRDVILDGTLSWEPFVQQTIAMARDVHRRRYR MGPGYKVDPDTGDITENYWEPADADAASPPPTRKPYRIEVAGVVCDAYLAVARGIRRAIV TGRAVRVRSQLVSHRRFAAAFRRYAGAVDGARLYSTNTMGAARLIARKDGVAGSLLVEPA EFACLDAVGGLNENATGVHDLYRGGATACGARSIWDDMIASPARADIQRELREAFRSVEH APPNTNGA

Transcript Sequence

Transcript ID	Os03t0628800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:23989148:23997520:1 gene:Os03g0628800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1flk (Fragment). (Os03t0628800-01)
Sequence	ATTGGAGTATACCACTGAGCAATTGCAACCATTCCATTCCATTCGATCCATTCTAGCTAG CTTATCTCCTCCAGCATTTTGGAGAGAGCTCTATCTTTCTGCTACTTCGCTTGAGAGAAT TTCCATGTTTTCATCTGCAGCCATGCAGCAGCTCAAAGACGATGGGTCGTCCGCGAGGCA GCTACAGCTGCTCGTCGCCGCGCTGTCGACGGCCGGAGCTGTGGCGGCCGCCGCCGTCGT GCGACGCAGGCACGGGAGGAAGGCCGCCGCAGCCGCAGCCGCAGCCGCCGCGGCGCCGCC GCCGGTGGTGATGAGGGAAATGCCGAGGCTGGTGATGGCGGAGTCCGGCCGCGTCGAGCA CATCGAGAAGTTCTCTCACTACGTCGCTAGGCAGATGGGGTTTCAGGACATAAATGAGTG CCCACAGCTGTGCAAATTAGCAAATAACTACCTCAAGAGGACCAAGAATTGCATGGATGA CATCGATGACTTCTTCGCAAATATCCTGGATTCGGAGTCCCTTTATGTCAAGTTCATAGA AGAGTTGGATAAATGCATTCTTGGATATTTTGCGTTCCATTGGGACCATGCTACCGCTCT TATCAGCCAGGCCTTGACCGTAGACTGTGGCACCGCCAGCAAGAAGAAGCTAAGGAACCT CGTGTTGGAAGCTACAAGGAAGCAGAGGTTTGAGCGGGTGACGAGGGACCTGAAGGTGAC GAGGGTGTTCTCGACGCTGGTGGAGGAGATGAAGGCGATCGGCGTCCCGACGGCGGCGAT GAACGGCGACGGCGAGGAGGAGCCGCACTGCACCGACGTGATGGCGCCGGTGGCGCACGA CGAGCGGAGCCCCGTGCTGCTGCTCATGGGCGGTGGGATGGGCGCCGGCAAGAGCACCGT GCTCAAGGAGATTCTCCAGGAGCCACTGTGGTCCAAGGACGAGGCGAATGCGGTGGTGGT TGAGGCGGATGCGTTCAAGGAGACGGACGTGATCTACCGTGCCATTAGCTCCATGGGCCA CCACAACGACATGCTCCAGACTGCTGAGCTGGTGCACCAGTCGTCGACGGACGCGGCGTC GTCGCTGCTGGTGACGGCGCTGAACGAGGGTCGTGACGTCATCCTCGACGGTACCCTCTC CTGGGAGCCGTTCGTCCAGCAGACCATCGCCATGGCGCGCGACGTCCACCGCCGCCGCTA CCGCATGGGCCCCGGCTACAAGGTCGACCCCGACACCGGCGACATCACCGAGAACTACTG GGAGCCCGCCGACGCCGACGCCGCCTCGCCGCCGCCGACCAGGAAGCCTTACCGGATCGA GGTCGCCGGCGTGGTCTGCGACGCGTACCTCGCCGTGGCGAGGGGGATCCGGCGCGCCAT CGTGACGGGGCGGGCGGTGCGGGTGCGGTCGCAGCTGGTGTCGCACAGGCGGTTCGCCGC CGCGTTCCGGCGGTACGCCGGCGCCGTGGACGGCGCGCGGCTGTACAGCACCAACACCAT GGGCGCGGCGCGGCTGATCGCGCGCAAGGACGGCGTCGCCGGCAGCCTGCTGGTGGAGCC GGCGGAGTTCGCGTGCCTCGACGCGGTGGGCGGCCTCAACGAGAACGCCACCGGGGTGCA CGACCTCTACCGCGGCGGCGCCACCGCCTGCGGCGCCCGCTCCATCTGGGACGACATGAT CGCCTCGCCGGCGCGCGCCGACATCCAGAGGGAGCTCCGGGAGGCCTTCCGCTCCGTGGA GCACGCGCCGCCGAACACCAATGGCGCCTAGATATGGTGTGTGTGTGTTCAATATGTTTC CCCAGAAATTAATCATGTGGGGAACTAAATTTGTTGTTGATGTGTAAAGGGAGTGTATTA ATTTGTGGTAAATGGATGTGCTTATTATATGAACTAGTAGGGTGGCCCGCGCAATTGCGC GGCTAGCATCCATAAAAAAATATTTAATTTTCTCT