Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0626500-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:23850245:23851996:1 gene:Os03g0626500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0626500-00)
Sequence

ATGGTTCCAATTGATGAGGATGAAACTCACGAAGGCATAAAGACAATTAGGATTCAGAAA
GCCTGTGAATTCACCACCAGTTCAGTTCTTTGCGTCTGCATTATCACCTGGAACATGAAC
GGCAAGATGTCTGTGGAGGATGTAACAAAGTTAGTGAGCTCCAACAGGAAGTTTGATTTG
CTAGTTTTCGGGTTGCAAGAGGTACCAAAATGTGATGTTGCACAGGTTCTGCAAGAAACC
ATGGCTGAGACACACATTCTATTATGCCAGAAAACCATGCAGTCTCTTCAGATGTTTCTT
TTTGGAGCAAAGAGTTCAGAGAAATACATCAGAGAGTTGAAGGTGGACAAACATGCAGTT
GGAGGTTGTGGAGGTATAATTGGAAGAAAGAAAGGAGCTGTAGCCATGTACATCAATTTC
AGTGGGATCCGTATGGTTTTTGTATCCTGCCATCTTGCAGCTCATGAAAATAAGGTGGAG
AAGAGGAACTCAGAATGCCAGCACATTTCACACTCACTGTTCTCCAAGAATGATATACAG
TATACTAAATCTGCAGACATAACGGTGTGGCTTGGTGACTTGAATTACAGACTACAGGGA
ATAAGCTCAATACCAGCAAGGAAGTTGATTGAAGAGAATCGTCAAAGTAAGCTAAGAGGC
AAAGACCAGCTTCTGCAAGAAGCTGAAAAGGGTGAAGTATTCAATGGGTACTGCGAAGGG
ACCTTGTTGTTTAAGCCAACGTACAAGTATAACATAGGGAGTAGCAACTACGATACAAGT
TATAAGATCAGAGTTCCTTCTTGGACAGATAGGATATTATTCAAGGTTGACCACACTTCT
GGCTTGGATGCGGTCTTAAACTCATACGAAGCACTTGATTGCATTAGGAGTTCTGATCAC
AAGCCTGTGAGAGCCCATCTTTGTCTGAAAGTACATGGTGACAGTGCATAG

Peptide Sequence

PEP ID

Os03t0626500-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:23850245:23851996:1 gene:Os03g0626500 transcript:Os03t0626500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0626500-00)
Sequence

MVPIDEDETHEGIKTIRIQKACEFTTSSVLCVCIITWNMNGKMSVEDVTKLVSSNRKFDL
LVFGLQEVPKCDVAQVLQETMAETHILLCQKTMQSLQMFLFGAKSSEKYIRELKVDKHAV
GGCGGIIGRKKGAVAMYINFSGIRMVFVSCHLAAHENKVEKRNSECQHISHSLFSKNDIQ
YTKSADITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEG
TLLFKPTYKYNIGSSNYDTSYKIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIRSSDH
KPVRAHLCLKVHGDSA

Transcript Sequence

Transcript ID

Os03t0626500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:23850245:23851996:1 gene:Os03g0626500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0626500-00)
Sequence

ATGGTTCCAATTGATGAGGATGAAACTCACGAAGGCATAAAGACAATTAGGATTCAGAAA
GCCTGTGAATTCACCACCAGTTCAGTTCTTTGCGTCTGCATTATCACCTGGAACATGAAC
GGCAAGATGTCTGTGGAGGATGTAACAAAGTTAGTGAGCTCCAACAGGAAGTTTGATTTG
CTAGTTTTCGGGTTGCAAGAGGTACCAAAATGTGATGTTGCACAGGTTCTGCAAGAAACC
ATGGCTGAGACACACATTCTATTATGCCAGAAAACCATGCAGTCTCTTCAGATGTTTCTT
TTTGGAGCAAAGAGTTCAGAGAAATACATCAGAGAGTTGAAGGTGGACAAACATGCAGTT
GGAGGTTGTGGAGGTATAATTGGAAGAAAGAAAGGAGCTGTAGCCATGTACATCAATTTC
AGTGGGATCCGTATGGTTTTTGTATCCTGCCATCTTGCAGCTCATGAAAATAAGGTGGAG
AAGAGGAACTCAGAATGCCAGCACATTTCACACTCACTGTTCTCCAAGAATGATATACAG
TATACTAAATCTGCAGACATAACGGTGTGGCTTGGTGACTTGAATTACAGACTACAGGGA
ATAAGCTCAATACCAGCAAGGAAGTTGATTGAAGAGAATCGTCAAAGTAAGCTAAGAGGC
AAAGACCAGCTTCTGCAAGAAGCTGAAAAGGGTGAAGTATTCAATGGGTACTGCGAAGGG
ACCTTGTTGTTTAAGCCAACGTACAAGTATAACATAGGGAGTAGCAACTACGATACAAGT
TATAAGATCAGAGTTCCTTCTTGGACAGATAGGATATTATTCAAGGTTGACCACACTTCT
GGCTTGGATGCGGTCTTAAACTCATACGAAGCACTTGATTGCATTAGGAGTTCTGATCAC
AAGCCTGTGAGAGCCCATCTTTGTCTGAAAGTACATGGTGACAGTGCATAGATAGACATT
TCCAG