Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0624800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:23738885:23746139:1 gene:Os03g0624800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0624800-01)
Sequence	ATGTGGCCGCCGCTTGCAGCGCTGCTCCGTCGCCTATCCTCTCACCCGTTTGACTCTCCC GCCATCCACGCTAACCTTGTCAAGTCCTCCTCCATCTCCAGCCCTATCCCTGCCACCGCC CTCCTCACCGCCTACGCCAATGCGGGCCTCCCAGCCGCGGCGTCCCGTCTGTTCGACGAA ATGCCCACCCGGGATGCCGTCGCCTGGAACGCGCTCCTCGCCTGCCTGGTCTTCCATGCT CGGCCCTGCGCCGCCGTGGCCGCCTTCCGTGACATGGCCACCGCGGGGTTCACACCCACG GCTACAACCCTCTGCACCATGGCCAAGGCGTGTGCCACGTCTCGCGCCCTTCGTCCTGGC CGTCAGGTCCACGCGCGCAGCATCCTCGCGTGTCAAGGCGATGTCATCATGGCAACAACG CTTGTAGATCTCTACATGAGCTGTGGCCTTGTTGAGGAAGCGCTGAGGCTGTTTATGTGC ACGGATTGCCCGAAGGATGTTGCTCTATACAATGCTGTTATTTCAGGTTGTGTGGAGAAT GGCAGATTCAGGGAGGCTTTCTTTATTCTGGGGAGGATTGAGCTTAATGGAATTACGCTG ACATGTGCTCTCACTGCCTGCTCAGCAACAGCGAATTTGATGTATGGTATGCAGGTGCAT TGCAAGGCTCTCCGTGGTGGGTTTACTTTAGAGACGATCTTATGCAATGCACTTATTGAT ATGTACGCAAAATGTGGGCGGACAACGGCTGCTCGTATGGTGTTTGATCGAATGGCTTGC AGGAATGTGGTTTCCTGGTCCAGTATGATTGATGCTTATAGTCACCATGGGCATGGGGAA GCAGCATTAGATTTGTTTAAAAGGATGGATGAAACTGTACCAGTGGTCTTGCCAAACGCC ATTACATTTCTTGCTGTTCTTTCTGCTTGTGGACAATCTGGTCTTGTGGATGAAGGCAGA GCTATGTTTCATTTGATGAAAAGACAATATGGGATTAATCCGGGACCAGAGCACTATGCA TGTTTTATTGATTTACTAGGCCGTGCAGGCCAGATTGATGAGGCATGGGATCTCTATTGT AGTTTCAGTACAACCCGAAGTGAGCTTTCTGGTTCCATCTGTGTGGCTATGTTGAATGCA TGTAGAGCTAATATGGATGTGGTGAGAGGCAACAAAGTAGCTCTGCACCTTCTGGAGGTT GATCCAGAAAATCCAGGAAGTCATGTGCTAATATCGAATTTTCATGCTGCTGCTAGACAA TGGTTTGAATCGGATGAATCAAGGAGGATTATAATTGATAAGGGTCTCAGGAAAGAAGCA GCTAGTAGTCATATCTCCTCCACTGGCTAG

Peptide Sequence

PEP ID	Os03t0624800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:23738885:23746139:1 gene:Os03g0624800 transcript:Os03t0624800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0624800-01)
Sequence	MWPPLAALLRRLSSHPFDSPAIHANLVKSSSISSPIPATALLTAYANAGLPAAASRLFDE MPTRDAVAWNALLACLVFHARPCAAVAAFRDMATAGFTPTATTLCTMAKACATSRALRPG RQVHARSILACQGDVIMATTLVDLYMSCGLVEEALRLFMCTDCPKDVALYNAVISGCVEN GRFREAFFILGRIELNGITLTCALTACSATANLMYGMQVHCKALRGGFTLETILCNALID MYAKCGRTTAARMVFDRMACRNVVSWSSMIDAYSHHGHGEAALDLFKRMDETVPVVLPNA ITFLAVLSACGQSGLVDEGRAMFHLMKRQYGINPGPEHYACFIDLLGRAGQIDEAWDLYC SFSTTRSELSGSICVAMLNACRANMDVVRGNKVALHLLEVDPENPGSHVLISNFHAAARQ WFESDESRRIIIDKGLRKEAASSHISSTG

Transcript Sequence

Transcript ID	Os03t0624800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:23738885:23746139:1 gene:Os03g0624800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0624800-01)
Sequence	AACCCTAAGACTAGAGGCGGGCTGGAGCGTGGAGGCGGGAGGCGGGCGCGTCGGCGCGGG CGTGGCTAGGCGGCAGTAGGCGACGCGTCGGCGGCTCAGGCGTGCGCCCGCGGCGTGTGG TGCCAGTGCGGCTGCGAGCCGGCGACTGCGGCGTGCGACGACGTCTGCGAGCCGGGCCGG CGACTGGGGTGTGCGGCGTGCATCTGCGAGCCGGCGTGAAGCAGGGTCACGGGCGGCGCA TGGACGACCGTTGAGGCGTCGCCCACAGCCGGTCGGCCCCTCTCCTCCCGTCCTCTCCCC TCGGCCCTTGCATGCCTCCTCTCCCCTGTCCTGTGGCCCTATGCTCCCACTGGTCACGCT GCTGCGGCCGCTCCCTCGCGCCGTGCTCCGCCGCCGTTGCTAGGCCGTCTCGCCGATCAT GCCTGACTCGATTCAATCGATTGCCGGAGGTGAGGTTTTTGGATTTTGGAGTAGCGGTGT GAAAAAGGATTAGATTTCTCATTCCCTCTCATTTCCTTTTCCGACTACACGAACTAGAGA TTAGATTTCTCCCGCCATACATATCCTGTCCCTAACCCAAATGCGTGATGTGGCCGCCGC TTGCAGCGCTGCTCCGTCGCCTATCCTCTCACCCGTTTGACTCTCCCGCCATCCACGCTA ACCTTGTCAAGTCCTCCTCCATCTCCAGCCCTATCCCTGCCACCGCCCTCCTCACCGCCT ACGCCAATGCGGGCCTCCCAGCCGCGGCGTCCCGTCTGTTCGACGAAATGCCCACCCGGG ATGCCGTCGCCTGGAACGCGCTCCTCGCCTGCCTGGTCTTCCATGCTCGGCCCTGCGCCG CCGTGGCCGCCTTCCGTGACATGGCCACCGCGGGGTTCACACCCACGGCTACAACCCTCT GCACCATGGCCAAGGCGTGTGCCACGTCTCGCGCCCTTCGTCCTGGCCGTCAGGTCCACG CGCGCAGCATCCTCGCGTGTCAAGGCGATGTCATCATGGCAACAACGCTTGTAGATCTCT ACATGAGCTGTGGCCTTGTTGAGGAAGCGCTGAGGCTGTTTATGTGCACGGATTGCCCGA AGGATGTTGCTCTATACAATGCTGTTATTTCAGGTTGTGTGGAGAATGGCAGATTCAGGG AGGCTTTCTTTATTCTGGGGAGGATTGAGCTTAATGGAATTACGCTGACATGTGCTCTCA CTGCCTGCTCAGCAACAGCGAATTTGATGTATGGTATGCAGGTGCATTGCAAGGCTCTCC GTGGTGGGTTTACTTTAGAGACGATCTTATGCAATGCACTTATTGATATGTACGCAAAAT GTGGGCGGACAACGGCTGCTCGTATGGTGTTTGATCGAATGGCTTGCAGGAATGTGGTTT CCTGGTCCAGTATGATTGATGCTTATAGTCACCATGGGCATGGGGAAGCAGCATTAGATT TGTTTAAAAGGATGGATGAAACTGTACCAGTGGTCTTGCCAAACGCCATTACATTTCTTG CTGTTCTTTCTGCTTGTGGACAATCTGGTCTTGTGGATGAAGGCAGAGCTATGTTTCATT TGATGAAAAGACAATATGGGATTAATCCGGGACCAGAGCACTATGCATGTTTTATTGATT TACTAGGCCGTGCAGGCCAGATTGATGAGGCATGGGATCTCTATTGTAGTTTCAGTACAA CCCGAAGTGAGCTTTCTGGTTCCATCTGTGTGGCTATGTTGAATGCATGTAGAGCTAATA TGGATGTGGTGAGAGGCAACAAAGTAGCTCTGCACCTTCTGGAGGTTGATCCAGAAAATC CAGGAAGTCATGTGCTAATATCGAATTTTCATGCTGCTGCTAGACAATGGTTTGAATCGG ATGAATCAAGGAGGATTATAATTGATAAGGGTCTCAGGAAAGAAGCAGCTAGTAGTCATA TCTCCTCCACTGGCTAGAAACTGATTTTGCACTAGTCTGGAAGTACAACTCATCAGCTTA GCAAAATTATACAGCACAAGGATACCAAGAACTTGGGAAACCAAGCCACAAACACAGCTC ATGCTAATTGGACTTGATGAGTGATATTGTTAAAGGGACTCACAAGGACGCTAAGTGGGA AAGGGGAACATTTTCGGTTCAGTGTTTACTATGGACAGGATATGAGATTATATGGTAGGA CCAATTTTTCTCGCACTAGTGTACATTTGTAAAGCAGTCATCTTGTTTCCAAGACTATGC ATTTGAAAGACTGGTCTTGCACCAGTTCTGTGGTGACAGGCATTAGTACGACAGCACTGA ACGAACCGTCTACTGGCAATGAATGCTGTTACTTCTGCCTGAGACATTGGAGGTAATCTT TAGCAGCTAGCGCCCCATTTTGGAACCCCTTCTCTGAGGGAGGGAGAGAGATGGTTTGGA ATGGCTTTGGGGAGGAGAGAAGAGAGGGGCCTTGAGCTGAGCCTTGGCCTCCATGGATAC TTCTCCATCTCATCATCACCAGGCCAAGCAGCCAAACAATTGCAGTTTTTGGAAGAAAGA ACTATGCACCGGTTTAATTCTACCCATATGGCCATATTCTCTTTTGTTTAGCGCATGGCG GGGGCTATTTCTTCTAATATGCCAAGGTCTTAAGGTATCAAGGACTGCAGACACCTGCTA TATGCTATCGCCACTAAGTTAATTTCAAGCTAGTTGGGGATTGATTTTGCAACTGAATCA AACTACATATCTTGGTCTGAATCCATTCCTCAATTTTCTTCTTGGTCCATCTCCACGCTC GTTCTGGCGTTCCTTTGTTGGTCGATCTCAAGTTTGCACCTCAGCATTTCCTCACTCCCA ATATTACTTGTGTTCTTTCTTGGCAGCAAACTCGATATTTTTTCTTTTTTTTGTGGGCTG GGCTTGTTAAGTAACAAAGAGAATTGTTGTTTCATTGCGTTTTTAGATGGATCCCTAGGT TTGTTTTCTAATGAGCCAAATAACCACACTGAGGTTGTACTATGTTTGAAGCCCAACAGA CAACTAAACACAACGTGCCTGCTTATATGTTTGAAGCCCAGACCCGACCTAATAAGAGGT GTATTTTGGACCTGTTAAAATTTACTCCTATTTACTAATGTTACACTTTAGACC