Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0622200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:23613955:23616375:1 gene:Os03g0622200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os03t0622200-01)
Sequence

ATGGGCATGCTGAAAATAGGCAAGAACTGCAGCGTTTGCAAGGAGTGGCAAGAACACTGC
TACTGGAGCCATATGGCCGACCACAGTAAGCACTTCTTGAAGCATATGGTTGGGGATTTC
ACCGAGAGCATGACCGTGCCTGCTAGATTTGCAAACAATTTCAACGGGCACATCTCAGAG
GAAGTGAATCTGAGATCTCCTAGCGGCGAAACCTGGAGCATTGGAGTAGCCAACAGCGAC
GCCGGTGAACTAGTTCTTCAGCCTGGCTGGAAAGAGTTCGTGGATGGCAACGGCATCGAG
GAAGGAGACTGCCTGCTCTTCAGGTACAGCGGCGTCTCCTCCTCCTTCGATGTGCTCATC
TTTGATCCGTCCGGCTGCGAGAAGGCGTCGCCGCATTTCGTCGGGAGCCATGGATTCGGG
AGAGCGGAGAACTCCGCCGGAGCTGAACAAGGAGGCAGAAACGGCCGCCGCACGCCGCCG
ATCGTCGACGGCGATAATGGCCATCGCCACCACCTGGAGATGACGCTCCACAGGAACAGC
TGCAGGAGCATCCCCAGAGCATGCAAACGCAGCTTATTCAGTGATGAAACAGAAGCGAAA
GAAAACGATGGCGAAGATGAAGATGTTGTCGCGGCCGCGGAAGGCGGGCGCTACGGGGAG
TACTACTTCAGCAGGCACGGACGGGTGGCCGAGTACAACCTGAGGGAGGAAGACAGGGAG
GAGATCTCGCGCGTCCCCGTGCCGGTTCAGCCCGGGAACCCGGTGTTCGTGCAGGTCATC
CACAGCAGCCACGTCCGCAGCAGCAAGTACTGCATTGTAGGGGTGTCGCCGGAGTTCGCG
GGTAAGTATCTGGGGGCGGTGGAGAGGGAGGTGGTGCTGGAGAGGGCGAGCAGGGGAGGG
GAGTGGCACGTCCCGTTCGTGCACCGGCAGAACACCCGCGGCTTCTACGGCGCCGGCTGG
CGTCAGTTCGCCGGCGACAATCGTCTCGTCGCCCACGACGTCTGCCTCTTCGAGCTCACG
ATGGTGGACGCCGCGGCCAGCGGCGGCGGAAACCGCCGGCGACGCTGGAGCCGGCGGCCG
ACGATGACCGTGCATGTCCTCCGTCGGGTGCGTGGTCGCTTCGTGCTTCTGCGCTGA

Peptide Sequence

PEP ID

Os03t0622200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:23613955:23616375:1 gene:Os03g0622200 transcript:Os03t0622200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os03t0622200-01)
Sequence

MGMLKIGKNCSVCKEWQEHCYWSHMADHSKHFLKHMVGDFTESMTVPARFANNFNGHISE
EVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLI
FDPSGCEKASPHFVGSHGFGRAENSAGAEQGGRNGRRTPPIVDGDNGHRHHLEMTLHRNS
CRSIPRACKRSLFSDETEAKENDGEDEDVVAAAEGGRYGEYYFSRHGRVAEYNLREEDRE
EISRVPVPVQPGNPVFVQVIHSSHVRSSKYCIVGVSPEFAGKYLGAVEREVVLERASRGG
EWHVPFVHRQNTRGFYGAGWRQFAGDNRLVAHDVCLFELTMVDAAASGGGNRRRRWSRRP
TMTVHVLRRVRGRFVLLR

Transcript Sequence

Transcript ID

Os03t0622200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:23613955:23616375:1 gene:Os03g0622200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os03t0622200-01)
Sequence

ATTTTTCCCTTTCTCCTATGAGACCTCTGCCTAGTTTCTAGATTTCTTCGTATCCGTTCT
GATATCCAAATGGGCATGCTGAAAATAGGCAAGAACTGCAGCGTTTGCAAGGAGTGGCAA
GAACACTGCTACTGGAGCCATATGGCCGACCACAGTAAGCACTTCTTGAAGCATATGGTT
GGGGATTTCACCGAGAGCATGACCGTGCCTGCTAGATTTGCAAACAATTTCAACGGGCAC
ATCTCAGAGGAAGTGAATCTGAGATCTCCTAGCGGCGAAACCTGGAGCATTGGAGTAGCC
AACAGCGACGCCGGTGAACTAGTTCTTCAGCCTGGCTGGAAAGAGTTCGTGGATGGCAAC
GGCATCGAGGAAGGAGACTGCCTGCTCTTCAGGTACAGCGGCGTCTCCTCCTCCTTCGAT
GTGCTCATCTTTGATCCGTCCGGCTGCGAGAAGGCGTCGCCGCATTTCGTCGGGAGCCAT
GGATTCGGGAGAGCGGAGAACTCCGCCGGAGCTGAACAAGGAGGCAGAAACGGCCGCCGC
ACGCCGCCGATCGTCGACGGCGATAATGGCCATCGCCACCACCTGGAGATGACGCTCCAC
AGGAACAGCTGCAGGAGCATCCCCAGAGCATGCAAACGCAGCTTATTCAGTGATGAAACA
GAAGCGAAAGAAAACGATGGCGAAGATGAAGATGTTGTCGCGGCCGCGGAAGGCGGGCGC
TACGGGGAGTACTACTTCAGCAGGCACGGACGGGTGGCCGAGTACAACCTGAGGGAGGAA
GACAGGGAGGAGATCTCGCGCGTCCCCGTGCCGGTTCAGCCCGGGAACCCGGTGTTCGTG
CAGGTCATCCACAGCAGCCACGTCCGCAGCAGCAAGTACTGCATTGTAGGGGTGTCGCCG
GAGTTCGCGGGTAAGTATCTGGGGGCGGTGGAGAGGGAGGTGGTGCTGGAGAGGGCGAGC
AGGGGAGGGGAGTGGCACGTCCCGTTCGTGCACCGGCAGAACACCCGCGGCTTCTACGGC
GCCGGCTGGCGTCAGTTCGCCGGCGACAATCGTCTCGTCGCCCACGACGTCTGCCTCTTC
GAGCTCACGATGGTGGACGCCGCGGCCAGCGGCGGCGGAAACCGCCGGCGACGCTGGAGC
CGGCGGCCGACGATGACCGTGCATGTCCTCCGTCGGGTGCGTGGTCGCTTCGTGCTTCTG
CGCTGACCTCCTCGGGCTACCTGCCGTATGTGTTTGGACTTTGGACTCGGGAGCAGCACA
CCTGAACTGATGAACTGAACCAGCTATAACCTGGTGGCCTCTGCTTTTGCTCTTGCTGGA
CCTGGTGGCAAACAGTGTGTCTATACTGGTATGTAATTATGTATGTACGTATGTACCTGG
TTGTATCTATACTAGTATGTAGTATATGTATGTACCTGGTGATGGTCAAGCTTGCACCTC
TGTACTGATGGTGATGGATGTTCTGATGG