Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0621400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:23556180:23562967:1 gene:Os03g0621400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0621400-01)
Sequence

ATGGCGGAGGAGCTCCCCTTCCCCGCTAACATCGAAGTGATGCGCCACACGCCGCGGTTC
AAGCTCATGCAGGCGGCATTCCACGGCGACCTCCGCGGCTTGAAGCGGCAGGCGAAGATT
CTGGATATGGGGAGGGGCCGCCTGAGGAAGGCCGTAGAGGATGTGAGGGTGGAAGGCGTG
CCGGGCGAGGAAGGTACAGGGGTGCTGCATATGGCTGCCTCCCATGGCCACATGGAGATG
TGCAAGTACCTGGTCGAAACGCTTCAGGTGGATGTGGATGATGCGGATGACAAAGGTAGA
ACATCTCTACTTAAGGCGGTACATTCTGGGCATCGGGGAATTGCCAAGTATCTTCTTAAT
CATGACGCCAATCCAGACCTAGCCATGTGCTGTGGGCTTACCCCTCTACATTCTGCCGCT
GGATTAGGTGATTGTGAGTCCGTAAAACTATTGCTTGCAAAAGGAGCTTATGTTGACCCA
ATGTCTACTTTTGGGACACCACTTCATCTTGCTGCTAAAGAAGGGCAGGATGGCACCATG
AAGATATTGTTGGACAACAATGCAGATTGCAACAAGATGGTAAACGGTATAACACCTCTC
CTCCTTGCTATGAAAGCTGCATCAGCAAAATGTATGGAGCTGCTGGTTGAGGCTGGAGCT
GATGCTACTTACTCTGATGTCATCTGGAATTATATGTCAACTACTTTTATGGATGATGAA
GATAGTGGTTCATCTGTGTTCTCGGATTCTGAACCAGAAGAGATTGATGCCAATCACCAT
ATTCCCGTCAATGACAAACCTGTGAATCGAAGGAAAATTGCAGAGTTTAAGTCGTTAGGG
CTTGAGGCAGTTGAGAAGAAGGATTATCTTTCTGCAGCAGGATTCTACAGTGAGGCCATG
GACCTTGACCCTGATGATGCAACCCTGCTGTCCAATAGGAGCCTTTGCTGGCTTTATCTG
GGTGAAGGAGGCAAGGCTTTGGTGGATGCTCATAAATGCAGAAAAATGCGGCCTGACTGG
CCAAAGGCCTGCTACCGTCAGGGTGCAGCTTTAATGTTACTGAAGGACTATGTGAGCGCG
TGTGAAGCACTTTTTGATGGATTCAAGTTGGATCCTGAGGACGTTGAGATTGAAAATGCA
TTACGGGAAGCTCTAGAGTTCTTGAAGGTGTCTCAAAGCACTTCGGCTAACTGA

Peptide Sequence

PEP ID

Os03t0621400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:23556180:23562967:1 gene:Os03g0621400 transcript:Os03t0621400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0621400-01)
Sequence

MAEELPFPANIEVMRHTPRFKLMQAAFHGDLRGLKRQAKILDMGRGRLRKAVEDVRVEGV
PGEEGTGVLHMAASHGHMEMCKYLVETLQVDVDDADDKGRTSLLKAVHSGHRGIAKYLLN
HDANPDLAMCCGLTPLHSAAGLGDCESVKLLLAKGAYVDPMSTFGTPLHLAAKEGQDGTM
KILLDNNADCNKMVNGITPLLLAMKAASAKCMELLVEAGADATYSDVIWNYMSTTFMDDE
DSGSSVFSDSEPEEIDANHHIPVNDKPVNRRKIAEFKSLGLEAVEKKDYLSAAGFYSEAM
DLDPDDATLLSNRSLCWLYLGEGGKALVDAHKCRKMRPDWPKACYRQGAALMLLKDYVSA
CEALFDGFKLDPEDVEIENALREALEFLKVSQSTSAN

Transcript Sequence

Transcript ID

Os03t0621400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:23556180:23562967:1 gene:Os03g0621400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0621400-01)
Sequence

CATTTCAAAACCCCAAACCCCCCAAGCTCCTCCTCCTCTCCCTCCTCTCCCTGCCCTCCT
AAACCCTACCCAATTTTCCTCTCCTCCATCGATCGATCGATCGCTCGCTCGCTCGCCCAT
CGCCATGGCGGAGGAGCTCCCCTTCCCCGCTAACATCGAAGTGATGCGCCACACGCCGCG
GTTCAAGCTCATGCAGGCGGCATTCCACGGCGACCTCCGCGGCTTGAAGCGGCAGGCGAA
GATTCTGGATATGGGGAGGGGCCGCCTGAGGAAGGCCGTAGAGGATGTGAGGGTGGAAGG
CGTGCCGGGCGAGGAAGGTACAGGGGTGCTGCATATGGCTGCCTCCCATGGCCACATGGA
GATGTGCAAGTACCTGGTCGAAACGCTTCAGGTGGATGTGGATGATGCGGATGACAAAGG
TAGAACATCTCTACTTAAGGCGGTACATTCTGGGCATCGGGGAATTGCCAAGTATCTTCT
TAATCATGACGCCAATCCAGACCTAGCCATGTGCTGTGGGCTTACCCCTCTACATTCTGC
CGCTGGATTAGGTGATTGTGAGTCCGTAAAACTATTGCTTGCAAAAGGAGCTTATGTTGA
CCCAATGTCTACTTTTGGGACACCACTTCATCTTGCTGCTAAAGAAGGGCAGGATGGCAC
CATGAAGATATTGTTGGACAACAATGCAGATTGCAACAAGATGGTAAACGGTATAACACC
TCTCCTCCTTGCTATGAAAGCTGCATCAGCAAAATGTATGGAGCTGCTGGTTGAGGCTGG
AGCTGATGCTACTTACTCTGATGTCATCTGGAATTATATGTCAACTACTTTTATGGATGA
TGAAGATAGTGGTTCATCTGTGTTCTCGGATTCTGAACCAGAAGAGATTGATGCCAATCA
CCATATTCCCGTCAATGACAAACCTGTGAATCGAAGGAAAATTGCAGAGTTTAAGTCGTT
AGGGCTTGAGGCAGTTGAGAAGAAGGATTATCTTTCTGCAGCAGGATTCTACAGTGAGGC
CATGGACCTTGACCCTGATGATGCAACCCTGCTGTCCAATAGGAGCCTTTGCTGGCTTTA
TCTGGGTGAAGGAGGCAAGGCTTTGGTGGATGCTCATAAATGCAGAAAAATGCGGCCTGA
CTGGCCAAAGGCCTGCTACCGTCAGGGTGCAGCTTTAATGTTACTGAAGGACTATGTGAG
CGCGTGTGAAGCACTTTTTGATGGATTCAAGTTGGATCCTGAGGACGTTGAGATTGAAAA
TGCATTACGGGAAGCTCTAGAGTTCTTGAAGGTGTCTCAAAGCACTTCGGCTAACTGAAC
TGTATGGGTTTTGCAGCGGATGTTCTGGTTCATGTTTTACCTTTCCACAAGGCTCTTTTG
GCATTGAATCCCTGAACTGGTTCCCTTTCGTAAGTTGAATGGCGAGTCGGTGACTATCGC
AGAAGTTTCATTGTGCTAACTCGAACTGACAGTGAGACATCTGAGAGTACTTTTTGCTGC
ATCTGTGTGATGCCCCATTATAATGTCTATGTAAACATACCGAACTACTGTTACGTCATT
TTGTTGATCACTGATTATGTGCATCGGTGCTTCCTAGATAGCAACTGCTGTTCTGCAGAG
TATATCCCCTCCGATAAAAATAATAATAATCAAAGATGGAATGTGACCCTTTCAGTGTAA
CGAATTCATTGTACTAAGAGGATCACACCGCTCTTAGGTGGGGTCTTTTTGGACGGAGGG
AGTACTAGACAAGCACAATATGACTGCGAGATGGTAATGGATTTTCATTTGTTGC