Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0616500-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:23353421:23360735:-1 gene:Os03g0616500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HEAT repeat family protein. (Os03t0616500-00)
Sequence	ATGCCGCCCGCGCGCCGCCGCCGCCGCACCGCCGCCGAGGTGGACGGCGAGGCCGTCCCC TCCTCCGCCGCCGACCTCCTCGCCCTCGCCGCCACCCTCTTCCCCGCCGCCGCAGACGCG CCGCTCAGGGACCCTCCCCACCTCAAGCACCTCGTCCACTCCCTCCCCGACTCCCACCCC GTCCTCCTCTCCCTCCCGGGCGCCCTGGCGCCGCCCCTCTCCGACGGCGGCGCCCCCGGG TACCCCCCGCGCGCCGCCGCGGTGCTCCTCCACCTCCTCCTCACCCACCCGTCCCACCCG CCGCGCTGGGGCGACCTCCTCCCGCCGCTCGCCCGCCTCCACGACCGCCTCGCGCAGCTC GCCACCGACGACCCGCCCCTGGCCGCGCTCGCCGTCGCGTGCTTCGAGCTCGCCTGGAGG GCCGCCGCGCCGGGGCGGGAGGCGGTCGTCGCACAGACCCTGCCGTACCTCTTCGCCGAG GCGCTCTCGTGCGGCTCCGCCACCGCGAGGCCGGTGCTCCGCCGCCTCCTCGCGCTCCGC GACGCGCTGGCGCTGCTCGACTACGACGACGACGACAGCATCTCCGACTTCAAGATGCTC CTGCTGCGCTGCTTCGTGTCGCCGCTCTTCCTCAAGGCCGAGGAAGGCAGGAAGCTCCTG TCCCTCGTGCTCGGCGTCAGCGAGGGCCTCGCCAGGGAAGGCCTGGAGCTCATCAGAGCG CAGGTGGGGATGCCGGGGGTGAAGCGGGCGGCGCTGGTGGCCTACGGGGAGGTGGTGTTC AGGGCGTGGAAGGACGGGGGTTGGGTCAGGGGGGAGGTCGGGGAGGCGTTCCTGCAGGGG ATGCTGGAGGGGGCCGTGCACGCCAGGAGCAAGGAGCTTGCCAAAGCGGCTAGGAAGCTT CTGTCTGCGTTCGTCGAGCAGAGAATGGTGGCTGGAGTTGAAAAATTAATCTTTCAGCTT GCCGAGCCCGTGCTGTTCCGGTCTTTGCAGGTTGCAAACTCCAATGTACGCCATAATTCT TTGCACCTTCTATTAGATTTGTTCCCCCTTGAAGACCCGGATGTGACAAAGGATGTCAAT GATCCTCTACTAGAGAAGCAATACTTCTTGCTAGACAAACTTCTCATGGACGATTGTCCA GAAATACGAACGGTTGCGATTGAAGGACTCTGTCGTATTCTTAACCAGTTTTGGGAAGTT ATTCCTTCCCTAACTATTTCAAAATTTTTAAGTAAAATTGTTGATGACATATCCAAAGAT TCTTGCACTGAGGTTCGGGTGTCAACCATAAATGGTCTGATATACTTACTTGACAATCCG CAAAGTCATGAAATACTGAAAGTTCTACTTCCAAGATTAAGTGACATGGTCTCTGATCCT GCTTTATCGGTCAGATCTTCTGCAGTTGATCTTCTTTTGGCTATACGTGATCTTCGATCT TTCCAGTTTAATAAGGTTGTTGGATTGGGTACTTTGCTGTCTTCACTCTCAAATGACCAC CCCCGTGTCGCACAGAAAATCACAAAGCTTCTCATCCCTTCATATTTTCCAACAAAATTG CCACTGAAAGAAGCGTGTGCTCGCTGCATTGCACTTATAAAGAGGTCACCCACAGCTGGA GCAAGGTTTTGTGAATTTGCTTTATCTGAAGGGTCTCCCCCAAGATCCCTTGTTGAACTG ATCAAAGTCTCTATTACTCTGGCACTGGCACCAACAGGAATGAACTCTGAACAGACTGAT GGTCTTGTTATTGCTTCAGCCAATCTAATTAAAAGCTTATCTGAGGAGCGCTCTAGTTTA GCTTCCTTAAGAGAATTCTTTGCAAATGCAAAGTTGAAGCTACTCTTTAAAACAGAAATT TCTGTGGGAGCCCGGTCTGCTCTACTCAGTATGGCTCCAGTTGTATCACCTGATGATCTA TCTGCTTTGCACGATGAATGCATGAATGTAGTCATGAACGCTGCAGGGGTTTCCACGCAA CAAGGTTGCCAAGAAGCAGTGCTAGCAGCACATAAGTTGGTTTTTTCAAGTGGCTGGTCT GACGAAATGTTTGAAGCACTGACAAATATTCTGCAATCTAAAGTGTCTTGTTTTGCTGAG ATTTATGATATAGAACCTCCTATCTGTCCCGTTGCTACTTCAAAGAGGAAGAAAGGAAAA TCACTTAAGAAAACACCAGCAAAGTCTGGTCATGATATTGGAAACGGGTCATCCAGTGAA GACTTTGATATTGTTGCAGGTGCATCATGGCAGATTAATGACATACTGAAAGATGAAGAA AAGAGAGTTGCCTTTCTACAATCTTCTTATTCAGACGTCGCATTTTCATCTCTGAAGGTC ATTTGTCAAGTGTACATTGAGCAGTGCCTGCAGTTTGACTCTTTAAATGCCACACCTCTT TTGGCTTATTTGAGTTTGGCTACACACAGCGCTCTTCAGGATATTGACCAAACTGATATC AGCACCTCTGAGTCAACAACCATCAATCACTCACTGGACCATCTGCTGAATTGTTTTGAC AAACTCCTAAATGAATCTGTTACTGGTTCCACAAACTCATTGAAGTTGAAGCAGAATAAG AAATCTGCACGGCAGAAACACCATCATGGAGGAATGCATTGA

Peptide Sequence

PEP ID	Os03t0616500-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:23353421:23360735:-1 gene:Os03g0616500 transcript:Os03t0616500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HEAT repeat family protein. (Os03t0616500-00)
Sequence	MPPARRRRRTAAEVDGEAVPSSAADLLALAATLFPAAADAPLRDPPHLKHLVHSLPDSHP VLLSLPGALAPPLSDGGAPGYPPRAAAVLLHLLLTHPSHPPRWGDLLPPLARLHDRLAQL ATDDPPLAALAVACFELAWRAAAPGREAVVAQTLPYLFAEALSCGSATARPVLRRLLALR DALALLDYDDDDSISDFKMLLLRCFVSPLFLKAEEGRKLLSLVLGVSEGLAREGLELIRA QVGMPGVKRAALVAYGEVVFRAWKDGGWVRGEVGEAFLQGMLEGAVHARSKELAKAARKL LSAFVEQRMVAGVEKLIFQLAEPVLFRSLQVANSNVRHNSLHLLLDLFPLEDPDVTKDVN DPLLEKQYFLLDKLLMDDCPEIRTVAIEGLCRILNQFWEVIPSLTISKFLSKIVDDISKD SCTEVRVSTINGLIYLLDNPQSHEILKVLLPRLSDMVSDPALSVRSSAVDLLLAIRDLRS FQFNKVVGLGTLLSSLSNDHPRVAQKITKLLIPSYFPTKLPLKEACARCIALIKRSPTAG ARFCEFALSEGSPPRSLVELIKVSITLALAPTGMNSEQTDGLVIASANLIKSLSEERSSL ASLREFFANAKLKLLFKTEISVGARSALLSMAPVVSPDDLSALHDECMNVVMNAAGVSTQ QGCQEAVLAAHKLVFSSGWSDEMFEALTNILQSKVSCFAEIYDIEPPICPVATSKRKKGK SLKKTPAKSGHDIGNGSSSEDFDIVAGASWQINDILKDEEKRVAFLQSSYSDVAFSSLKV ICQVYIEQCLQFDSLNATPLLAYLSLATHSALQDIDQTDISTSESTTINHSLDHLLNCFD KLLNESVTGSTNSLKLKQNKKSARQKHHHGGMH

Transcript Sequence

Transcript ID	Os03t0616500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:23353421:23360735:-1 gene:Os03g0616500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HEAT repeat family protein. (Os03t0616500-00)
Sequence	TTCCCCCCAAATCGCGCTCTTCATTTCGAAACCTCACCTCGCCCTCACCGCCGCAATGCC GCCCGCGCGCCGCCGCCGCCGCACCGCCGCCGAGGTGGACGGCGAGGCCGTCCCCTCCTC CGCCGCCGACCTCCTCGCCCTCGCCGCCACCCTCTTCCCCGCCGCCGCAGACGCGCCGCT CAGGGACCCTCCCCACCTCAAGCACCTCGTCCACTCCCTCCCCGACTCCCACCCCGTCCT CCTCTCCCTCCCGGGCGCCCTGGCGCCGCCCCTCTCCGACGGCGGCGCCCCCGGGTACCC CCCGCGCGCCGCCGCGGTGCTCCTCCACCTCCTCCTCACCCACCCGTCCCACCCGCCGCG CTGGGGCGACCTCCTCCCGCCGCTCGCCCGCCTCCACGACCGCCTCGCGCAGCTCGCCAC CGACGACCCGCCCCTGGCCGCGCTCGCCGTCGCGTGCTTCGAGCTCGCCTGGAGGGCCGC CGCGCCGGGGCGGGAGGCGGTCGTCGCACAGACCCTGCCGTACCTCTTCGCCGAGGCGCT CTCGTGCGGCTCCGCCACCGCGAGGCCGGTGCTCCGCCGCCTCCTCGCGCTCCGCGACGC GCTGGCGCTGCTCGACTACGACGACGACGACAGCATCTCCGACTTCAAGATGCTCCTGCT GCGCTGCTTCGTGTCGCCGCTCTTCCTCAAGGCCGAGGAAGGCAGGAAGCTCCTGTCCCT CGTGCTCGGCGTCAGCGAGGGCCTCGCCAGGGAAGGCCTGGAGCTCATCAGAGCGCAGGT GGGGATGCCGGGGGTGAAGCGGGCGGCGCTGGTGGCCTACGGGGAGGTGGTGTTCAGGGC GTGGAAGGACGGGGGTTGGGTCAGGGGGGAGGTCGGGGAGGCGTTCCTGCAGGGGATGCT GGAGGGGGCCGTGCACGCCAGGAGCAAGGAGCTTGCCAAAGCGGCTAGGAAGCTTCTGTC TGCGTTCGTCGAGCAGAGAATGGTGGCTGGAGTTGAAAAATTAATCTTTCAGCTTGCCGA GCCCGTGCTGTTCCGGTCTTTGCAGGTTGCAAACTCCAATGTACGCCATAATTCTTTGCA CCTTCTATTAGATTTGTTCCCCCTTGAAGACCCGGATGTGACAAAGGATGTCAATGATCC TCTACTAGAGAAGCAATACTTCTTGCTAGACAAACTTCTCATGGACGATTGTCCAGAAAT ACGAACGGTTGCGATTGAAGGACTCTGTCGTATTCTTAACCAGTTTTGGGAAGTTATTCC TTCCCTAACTATTTCAAAATTTTTAAGTAAAATTGTTGATGACATATCCAAAGATTCTTG CACTGAGGTTCGGGTGTCAACCATAAATGGTCTGATATACTTACTTGACAATCCGCAAAG TCATGAAATACTGAAAGTTCTACTTCCAAGATTAAGTGACATGGTCTCTGATCCTGCTTT ATCGGTCAGATCTTCTGCAGTTGATCTTCTTTTGGCTATACGTGATCTTCGATCTTTCCA GTTTAATAAGGTTGTTGGATTGGGTACTTTGCTGTCTTCACTCTCAAATGACCACCCCCG TGTCGCACAGAAAATCACAAAGCTTCTCATCCCTTCATATTTTCCAACAAAATTGCCACT GAAAGAAGCGTGTGCTCGCTGCATTGCACTTATAAAGAGGTCACCCACAGCTGGAGCAAG GTTTTGTGAATTTGCTTTATCTGAAGGGTCTCCCCCAAGATCCCTTGTTGAACTGATCAA AGTCTCTATTACTCTGGCACTGGCACCAACAGGAATGAACTCTGAACAGACTGATGGTCT TGTTATTGCTTCAGCCAATCTAATTAAAAGCTTATCTGAGGAGCGCTCTAGTTTAGCTTC CTTAAGAGAATTCTTTGCAAATGCAAAGTTGAAGCTACTCTTTAAAACAGAAATTTCTGT GGGAGCCCGGTCTGCTCTACTCAGTATGGCTCCAGTTGTATCACCTGATGATCTATCTGC TTTGCACGATGAATGCATGAATGTAGTCATGAACGCTGCAGGGGTTTCCACGCAACAAGG TTGCCAAGAAGCAGTGCTAGCAGCACATAAGTTGGTTTTTTCAAGTGGCTGGTCTGACGA AATGTTTGAAGCACTGACAAATATTCTGCAATCTAAAGTGTCTTGTTTTGCTGAGATTTA TGATATAGAACCTCCTATCTGTCCCGTTGCTACTTCAAAGAGGAAGAAAGGAAAATCACT TAAGAAAACACCAGCAAAGTCTGGTCATGATATTGGAAACGGGTCATCCAGTGAAGACTT TGATATTGTTGCAGGTGCATCATGGCAGATTAATGACATACTGAAAGATGAAGAAAAGAG AGTTGCCTTTCTACAATCTTCTTATTCAGACGTCGCATTTTCATCTCTGAAGGTCATTTG TCAAGTGTACATTGAGCAGTGCCTGCAGTTTGACTCTTTAAATGCCACACCTCTTTTGGC TTATTTGAGTTTGGCTACACACAGCGCTCTTCAGGATATTGACCAAACTGATATCAGCAC CTCTGAGTCAACAACCATCAATCACTCACTGGACCATCTGCTGAATTGTTTTGACAAACT CCTAAATGAATCTGTTACTGGTTCCACAAACTCATTGAAGTTGAAGCAGAATAAGAAATC TGCACGGCAGAAACACCATCATGGAGGAATGCATTGAGAGGGACAGTTAATGTATACATG CTTGGCACTTCAATTCTCAAGTTTATCGTTGACACAATAACCATCAAGTTGATCAGTGAT AATAAAGTAGGATGTCTCAATTTTGCATTGTCCTTCACAAAATATGCATCATCAGCCATA AAAATGCATCAGGAGCAGAGCTCATCTTTCAAAGGGAATGATCTGAAAGACATATTGATG CTTATACGGAGTTCCTTCACATATGCAGCCAAGCTGCTTCATTTGGTCCTAGCAAACTCA ATTGAGTCACAGAGTCCCCCAGAGGAAGCCTTCTTTCTTGCCAATAATCTTCTTGATCTT GTACCCTCTGTTGAGTCTGCTGCAGGCTCCAAATTTGCTCTCAGTTTAGTTTCTGTCGTA AAGCAGTGGCTACCAGTTGTCATAATGGGTCTTGGATGCCGCTGGTTGATTGGGCCACAG GCTGAGGGTAACATGTGTGACTTTGGTGGGTCTTGCTTGCCACTATGGGTGGTTGCATTG GCCAAGAATGAGCTGCTTGATGATGAAAAACCTAGAGATGATGATCAAAGCGAGCAGGCC AGTGAGGACTCACAGTCATCCAGAAAACTAGCAGAAATGATGGTAATTCTTCTGAAGAAA GGGAGCCCGAAAATTCTTGATTCTGTGGCTGGCGTCTTCCTGTCCACCCTCAAGTTGGCG CTGCAGAGAGCGGAGTACGGTGTTGTCTTGGGCTTGACACGCTTTGTCTGTGTCAGGTTG CTTGGGAGTGACTCCTCGGCATCGGAGAAGCTGCATCTTGCTCATGATTCACTTCGTGAG AACTTCTTTGAGATTGACAAGCATGTCATGGACGATCTAGTTGACAGCGAGGAATCGAGG CAGCAACTGGAGAGTGCCAAAGCTTTGATAAGATCAATTCTCTCTGACGTCTGATCATGT ACATACTACTGTAAGATCAA