Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0615300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:23280702:23285567:-1 gene:Os03g0615300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1618 domain containing protein. (Os03t0615300-01)
Sequence	ATGGCGATGTCCTCCTCCTCCTTCCCCACCGCCACCGCCACCGCCACCGCCTCCTTCCCC AACTGGGTGATGCTGGAGCGATTTGTCTTCCGCAGAGACGACGACAAGTCATTCCCCGAC GACACCAAGGCTACACTGAGGGCATCCGGTTCCGGATCCCACAAGACCCCCTTTACCATC GCCTTCCGTATCGCCGACCCTCCGGCGATCTCCCGCCTGTACGTGCAGTGGCCACAGGGC CCGAATCCGGAGGAGATGGTGGCATGCCACCTCGTGGCCACCCACCGCAACCTCGTTCTC GTATGCTTCTGCTACATCGTCGAGTGCCCTGTTCCGGCTTGCCCGCAGGACTACTTCATC TTCACCGCGTCCGGCGACGACCCAGTTTCCTCGCCGCTACTCAAAGCCCTCCCCCCATGT ACCTACCAGCCAAAAGGGGGGGAACCCCTCCCATGTACCTACCAGCCAGAAGGCGGCTTC CCCCCATCTGATGTTGAGGGCGACGGCAACCTGCGGTATCCATTGGAGTTTCGATCCGTC GGCATCTTGTGCCAAGGCGAAGAGTTTGCCGTCGCCGAGCTGCAGGTCCTCAGAAACATC AATGCTAATGTCAAAGCCAGACTGTGCGTGCTCCGCTCGGCCATATCCTCCAAAGGTGAA GATGGAGATGGAGGCGGCCGGTGGGATATCATGGAGCTGCCAATCGTGTACGGCAGCGGC GAAGAGTACTGGGACATCTTCTACTGGACCACTGACACTGTGATCGCCTTCCAAAACTAC CTCTGCTGGGTGGACTACGACCGAGGCATGCTCTTCTGCGACGTACTGCAGAAAAGGCCT GGAATCGCCTTCATCCGGTTTCCTCTGGACAGCTTCCCTAACGGTAGATCTCGCCGCCAT TTCTCCCAGGTGTACCGTGGTGTGTCTGTCACACCGAGTGCGACGGCTCTGGCGCCCTCA AGTTTGCTGATGTCAACCGGCTCGATAGCAAGTTGTTAG

Peptide Sequence

PEP ID	Os03t0615300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:23280702:23285567:-1 gene:Os03g0615300 transcript:Os03t0615300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1618 domain containing protein. (Os03t0615300-01)
Sequence	MAMSSSSFPTATATATASFPNWVMLERFVFRRDDDKSFPDDTKATLRASGSGSHKTPFTI AFRIADPPAISRLYVQWPQGPNPEEMVACHLVATHRNLVLVCFCYIVECPVPACPQDYFI FTASGDDPVSSPLLKALPPCTYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLRYPLEFRSV GILCQGEEFAVAELQVLRNINANVKARLCVLRSAISSKGEDGDGGGRWDIMELPIVYGSG EEYWDIFYWTTDTVIAFQNYLCWVDYDRGMLFCDVLQKRPGIAFIRFPLDSFPNGRSRRH FSQVYRGVSVTPSATALAPSSLLMSTGSIASC

Transcript Sequence

Transcript ID	Os03t0615300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:23280702:23285567:-1 gene:Os03g0615300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1618 domain containing protein. (Os03t0615300-01)
Sequence	GCGTAGGTCTCGTTTTTCTTGTCCTAATTCCCCAATCCATCTCAGGATCTCTACCGATCC ATGGCGATGTCCTCCTCCTCCTTCCCCACCGCCACCGCCACCGCCACCGCCTCCTTCCCC AACTGGGTGATGCTGGAGCGATTTGTCTTCCGCAGAGACGACGACAAGTCATTCCCCGAC GACACCAAGGCTACACTGAGGGCATCCGGTTCCGGATCCCACAAGACCCCCTTTACCATC GCCTTCCGTATCGCCGACCCTCCGGCGATCTCCCGCCTGTACGTGCAGTGGCCACAGGGC CCGAATCCGGAGGAGATGGTGGCATGCCACCTCGTGGCCACCCACCGCAACCTCGTTCTC GTATGCTTCTGCTACATCGTCGAGTGCCCTGTTCCGGCTTGCCCGCAGGACTACTTCATC TTCACCGCGTCCGGCGACGACCCAGTTTCCTCGCCGCTACTCAAAGCCCTCCCCCCATGT ACCTACCAGCCAAAAGGGGGGGAACCCCTCCCATGTACCTACCAGCCAGAAGGCGGCTTC CCCCCATCTGATGTTGAGGGCGACGGCAACCTGCGGTATCCATTGGAGTTTCGATCCGTC GGCATCTTGTGCCAAGGCGAAGAGTTTGCCGTCGCCGAGCTGCAGGTCCTCAGAAACATC AATGCTAATGTCAAAGCCAGACTGTGCGTGCTCCGCTCGGCCATATCCTCCAAAGGTGAA GATGGAGATGGAGGCGGCCGGTGGGATATCATGGAGCTGCCAATCGTGTACGGCAGCGGC GAAGAGTACTGGGACATCTTCTACTGGACCACTGACACTGTGATCGCCTTCCAAAACTAC CTCTGCTGGGTGGACTACGACCGAGGCATGCTCTTCTGCGACGTACTGCAGAAAAGGCCT GGAATCGCCTTCATCCGGTTTCCTCTGGACAGCTTCCCTAACGGTAGATCTCGCCGCCAT TTCTCCCAGGTGTACCGTGGTGTGTCTGTCACACCGAGTGCGACGGCTCTGGCGCCCTCA AGTTTGCTGATGTCAACCGGCTCGATAGCAAGTTGTTAGGCTCCCTAGAACCAGGACGGG GCTATACCATCACCTGCCACACTTTGAGGACGTTAGGGCTGGATGTTGGGGCCATTGAGT GGAGCAAAGACTTTGCGATCACGTCCAAGGAGATTTGGTCCTTCAAGGGCCCTGAGCTCG TGCCTCATGAAGTTCTCCTGTTTCTTACCGTGAGCATGGAGATGCCGAATGTCATGCACT TCCTCACCTGCGACTATGAGCACGTGATCAGGAAGATGTCGGTTGTGACCATTGACCTAG CCAGCAAGACCGTGTTGTCAGTTATTCCATATGTTAATGGGCAGGAGGACCTTTCCGGTG AGGATGCCGACATGGTCAGGGCAAAGTCAAGCTATCCCCAGTCCTTCCTCCCCTCTGAGT TTTCCAAGTACTTCAATTCAATCTAACATGGAAGAGGAATAACCAGGAATGAGCATTTGT AGGAGCTAGCAGGAAGAGGAAGAACCAGGGATGAGTGTTCTGAATTAGTGGTTTACAAAG TGCTAAATGTTTACTTTCATGTATTTATTTCTTGCGTCGCTATGAACTTGAATGTCACAC TTCAGAACTCCTTGTAGTGCAGTACCAACTAGAGGCATTTTGTGGATCCATTTACACCTA ATATGAAAAATGGTTAAATCATCGAGCAACTGTGTTGCAAAATATATTTCTCCGTAGGTA AGCAGGGGACAAAGGATCGTTTGGCTGTTTCAAACATCGCTACTGCTCGCTGTTCAGCAG CATCAGCACGCTTTTAGGCAGCAGCTGCGTGCTTTTTTGCAAAAAAAATCATGTATGAAA GTTGTTTTAAAAAAAATCATATAATTCCATTTTACAAGTTTAAAATAATTATATATGATT CTGCTTCTTATTGATTTGAGCAAATATTATTCGAATGGGGGAGGAATGTCTACCTTAGAT TCAGCTAGCCACTGCACGAAAGTGGTTTATATCCATTTTGTTTTGCAAATAGGGAGGTTG TGTGATTAGAGCTTGATCTCACATTTCTTTTGTTAGAGCAAAAGCACTACCTAATTTGTT TTGCAATTTTACCTTTGGAGATTAGCCTGGTTGGTTTTAGAGGATTAGCCATGGGGATTA GTCTCTCTTTTTGCCGGGATGACCGAAGGAGGTCACCCAATGTTATTAAGATAGAGGAGA AAGGATTAGTCTCTCTAGGTTTAGAGGATCAAATTGAGGGAATGATCCATGGGGCAACCA CTACTCGATAGTGTATAAAATTTGTTCACTGATTTGTTTATTTTTGGGTAACTGTCAGAA AAAAGATTGTATTATTGTTGTTTGATTCCACACAGCATGTAGCGCGGCAAGAATACATAG TCCCTCTGCTTCTCCGTAGTCCTTGGCTCTCTTGATGATTTTTCATGCATATGTATGCTA GATCATACAGATAAAGCTAGTTCTGTATGTTTTGTTTACTTCTGAAGATGGCTTACTTTT GTTCAATTTTTAACATAATAATAAATAATCTTCAGTTTTGGTTGTTTAGCATAATAGCAT TTCACTTGAATTCACTTCAGTTCAGTTTTGTTCAATGGAGATTAATAGCATTTAATTTTG TAAATTTACATGGATATATTTGTCTCTCCTACAAACACTACTTAACTAGTTTTGTCTTTG TATCTTTATATGATTATATATTTTTTTTATGATTTGCCTTCTTGCAATCTGCAATTGCTT GCACGGCTTGCATCTCATGGTTTGCAGAATATATACCCCACATTTCAGCTTCTCTAAATT TTATAGGTCCTGACATCTTCTCTGAATTTTTATCTTATATTTTTCCTTTTGTACTAATCA TAATATAGAAACGAAGTTCTAAAGAATGGTCGTCAATTCTAATTTATGGCTTTTTAGGTA GTTGGTGAAGTGTACCTAGTTTTGTCAATTTTGTTAGCAATGAAGATACTAATAAGACAG TTTTGTTTGCTACCAATTGTACTTTGTTTTGTGTAAATGGACAGTACCTCCTACTGATTA ACCTACTAATTATACTTAGTTTTGTGTAATTTGTTAGCAAGCCTACTAATAGTACCCTGT TTTATTAGAATGCATTGTTTGTAATTTTCTCCTTTCACTATTCTCTTTGTTTTGGTCACC AAATTTAATTGATGTAGTTATGCAACATTTTTGTGTTTTTTTTAAAGTTGCAACGAGAAG GTTGTGTGTCCCATTTGTAGTTTTGGTATTTTGCCCGATGGTTGCTTTGTAGGTTAGCTC GACGGTTGCTTGCTGGCCTAGTCATAGTCTAGCTGCAAACTTCTTGTCTTTTGAGTACTA AAAGCACACTTTTGTTCGTTTTGTGTGTAATATTTAGGAGCTGCATTATTTTATCCTTTT GTTTATTTTGCTTTGTTTTGTTTTGTAAGCTAAAAGTACTTAGTTTTGTCACCACACTGT TAGCTCATATATTCTAAAATGTTCACTAATATGTTCAACTTAATTAGTTTTGTAACCTCC TAAAATAGTTCTATTAGTTTTGTAACCTTCTAAAATATGAATTAGTTTTTGTCTGGCTGA TCTTCCTTTGGTTAGGTACTACAAAGTCTTAATTCAGACATATTTCATCTATATTATTTG GTCAGGCTGGCATTTGAAGTTCTTATTTTAGTCTTATACTATAGTTTTTTTACATTTGTT AAAGATGATAATTTATTTGTTAGCACTGAGCATGTTTAGAAATCTGAAATATGAAAACAT GCATGTTCTCATGAAAATAAATATTAGTTTTGTTTAAATTCCAATCCACATATTTTTTAA GCAATGTCAGAAATTACCATGCTTCACTTATTGACCTAGTGTATGTATAGTATTTGATGG ATCATGTTGATTTGGATTTGCTATACTAACTTGTTCCTATTCC