Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0610400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:23036335:23037381:-1 gene:Os03g0610400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os03t0610400-01)
Sequence

ATGGCAGTGGAGGAGGTTCTTGATGGCGCCGCGCCGATGCTGTCGTCGTCGCCGGCGGCG
AGCGGCGAGGAGGTGGGGGCGCGGAAGCCGCAGCAACGGTGCGGCGGCGCCGAGGGGTGG
TCCAAGCGGAAGCGCTCGAGGCGGCGCCACCGCGACCGCGCCGCTGCGCCGCCGCCTCAC
GGTTCGGAGGAGGAGCACCTCGCGCTCAGCCTCCTCATGCTGGCGCGCGGCCACCGCGAC
CCCTCGCCGGCGCCGCAGGAGCAGCACGGGTGCTCCGTGTGCGGCAGGGTGTTCTCGTCC
TACCAGGCGCTCGGCGGCCACAAGACGAGCCACCGCCCCAGGACGCCGCCGACGATGGCG
GCCGTTGTCGTCGTAGACGAGCCGGCAGCGACGACGGCCTCGCCGGCCGCGTCCTCGTCC
AATTCCGGCTCCGGCAGCGGCGGCGGCGGCGGAAACAAGGTGCACGAGTGCTCCGTGTGC
AAGAAGACGTTCCCGACGGGGCAGGCGCTGGGCGGGCACAAGCGGTGCCACTACGAGGGC
CCGATCGGAAGCGGCGGCGGCGCCGCTGTCGCCGGCCGCGGGTTCGATCTGAACCTGCCG
GCGGTGGCGCTGCCGGACATCATGACGGAGCGGTGCTTGCCGGCGGCGGCCGAGGAGGAG
GAGGTGCTCAGCCCGCTTGCCAGCTTCAAGAAGCCAAGGCTAATGATCCCTGCTTAA

Peptide Sequence

PEP ID

Os03t0610400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:23036335:23037381:-1 gene:Os03g0610400 transcript:Os03t0610400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os03t0610400-01)
Sequence

MAVEEVLDGAAPMLSSSPAASGEEVGARKPQQRCGGAEGWSKRKRSRRRHRDRAAAPPPH
GSEEEHLALSLLMLARGHRDPSPAPQEQHGCSVCGRVFSSYQALGGHKTSHRPRTPPTMA
AVVVVDEPAATTASPAASSSNSGSGSGGGGGNKVHECSVCKKTFPTGQALGGHKRCHYEG
PIGSGGGAAVAGRGFDLNLPAVALPDIMTERCLPAAAEEEEVLSPLASFKKPRLMIPA

Transcript Sequence

Transcript ID

Os03t0610400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:23036335:23037381:-1 gene:Os03g0610400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os03t0610400-01)
Sequence

ATCATCTCTCTCACAATTGCCAACGCCACTGCATGCCTAGCTAGCAATTAGAGTAGCTTA
CTACTCTTTTCTTTGCCCATTACTCTACTCCACTGATTATTCTTGTCTTGTTAGTATTAG
CTAGTTAGCTAGGCATGGCAGTGGAGGAGGTTCTTGATGGCGCCGCGCCGATGCTGTCGT
CGTCGCCGGCGGCGAGCGGCGAGGAGGTGGGGGCGCGGAAGCCGCAGCAACGGTGCGGCG
GCGCCGAGGGGTGGTCCAAGCGGAAGCGCTCGAGGCGGCGCCACCGCGACCGCGCCGCTG
CGCCGCCGCCTCACGGTTCGGAGGAGGAGCACCTCGCGCTCAGCCTCCTCATGCTGGCGC
GCGGCCACCGCGACCCCTCGCCGGCGCCGCAGGAGCAGCACGGGTGCTCCGTGTGCGGCA
GGGTGTTCTCGTCCTACCAGGCGCTCGGCGGCCACAAGACGAGCCACCGCCCCAGGACGC
CGCCGACGATGGCGGCCGTTGTCGTCGTAGACGAGCCGGCAGCGACGACGGCCTCGCCGG
CCGCGTCCTCGTCCAATTCCGGCTCCGGCAGCGGCGGCGGCGGCGGAAACAAGGTGCACG
AGTGCTCCGTGTGCAAGAAGACGTTCCCGACGGGGCAGGCGCTGGGCGGGCACAAGCGGT
GCCACTACGAGGGCCCGATCGGAAGCGGCGGCGGCGCCGCTGTCGCCGGCCGCGGGTTCG
ATCTGAACCTGCCGGCGGTGGCGCTGCCGGACATCATGACGGAGCGGTGCTTGCCGGCGG
CGGCCGAGGAGGAGGAGGTGCTCAGCCCGCTTGCCAGCTTCAAGAAGCCAAGGCTAATGA
TCCCTGCTTAATTAAAAAAAATAATTAATCTAGCACCACAAGTCTACTCATCCTTGCTGC
AACTGTTGGATTAGTGATTAATTAGTTGTGAGTAATTTGCTGGTGAAATACTGTAGATTC
AGGCGAGCTGGTCTCCGATATATTATTGGTGGAGTTTGTGTGTATAATTCATTTCTTGTA
TTTAAATTTCCGTGTAGAATGATTCTT