Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0602600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:22547535:22552000:1 gene:Os03g0602600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0602600-01)
Sequence	ATGCACCGAATGGCTTCTCTTCTTCTCCCCCCGCAGTTTCTTTGCTCCCTGCCTTGTAGT ACCAACTCAATCAGGAGCCATTTACATTATAAGCCCCACTTCTTGGGAAACATTATGACT AAGCCTAAAGCTAAAATGAGGCTGCTCAACCGAAACGTAAGTTCCATGGCAAAGAAGAGC TCTCAAGATGTAGCAGAAGGTTCAAGTGATGATGAGAGTGACGGCGAGACATCAAAAACC AAGAAAAGAGCTCCGAGACGTGGAAGAAAGAAAGCCACCATACAAGCATCAGAAGGGGAA ACACAAGAAGGTCAAGTGAGCACTGAAGAAGATGAATCCCCTGAAGGGACTAAGAAAATA AAAAGGAGGGGCCGCAAGAAAGCTGCAACTACTGCAAGCTCATCGGAAGAGAAGGACAAA GCAAAAGAACCAAAGAAGAGGGGCAGAAGAAAAGTTAAGACTGTAGAGGAATTGAGTGAC AATGAAGGGGAAGATCTGGGTGAAGATCTAGTGCCCTCCAATGACAGGCAGGAGAAAATT TCAGCAAATGACCTAGAAAGTAAAATAGCAGCATTGCTATTAGAAGATACTGATGATAAT GATATTAACAATTTAATCCCTCTTGTGTGCTGCTTTGGGCCTGCTAAGTACTCATTTATT CCTTCTGGAAGACCTGCTAATAGGCTGATAGATCATGAAATTCATGAGGGAATGAAAGAC ATGTTCTGGTCTCCAGATCAATTTGTAAGGGCACCAGGAGGATCATCATCCAATGTTGCT CTTGCTTTAGCAGCTTCTGGTGGCCGGGTTGAATTCATGGGAAAACTAGGCGATGATGAT TATGGTCAAAGTACATTATATCACTTGAACGTCAATGGAGTTCAAACTCGGGCAATTAAA ATGGACCCTTCAGCGTTTACTGCCATGTCCTTGATGAAGGTCACAGGTAGGGGTAGCTTG AAAATGAGCTGTGCTAAACCTTGTGCAGAGGATTGTTTTGTCCAAACTGATATCAACCCA GCTGTTTTAAAAGAGGCTAAGATGTTTTACTACAATTCTTCAGCTTTGCTTGAGCCCACG ACACGATCATCATTGTCGAAAGCAATTGAGGTTTCCAAGAAATTTGGTGGTGTAACATTC TTTGATCTCAATCTTCCACTGCCATTATGGTCGTCCAGTAAGGAGACCAAGTCACTTGTC AAGGAAGCATGGGAAGCTGCTGATATTATTGAAATCACTAAGCAGGAACTTGAGTTCTTG TGTGGCATTAAACCATCTGAGAAATTTGGTACGAAGGATAATGATAAATCCAAATTCACT CACTACAGCCCAGAAGTTGTTACGAAATTGTGGCATGAAAATCTCAAGGTCCTTTTTGTG ACAAACGGCACTTCTAAGATTCATTATTACACAAAAGAGCATGATGGCTGGGTTCGTGGC ACAGAAGATGCACCAATTACTCCTTTCACCGGTGACATGTCACAATCAGGTGACGCCATT GTTGCAGCTCTGATGAAGATGCTGGCAATTAACCCTCACCTGGTCACTGACAAGGATTAC TTGCATACTGCAATGAAACATGCTATTACATGTGGTGTCATTGACCAGTGGTTACTTGCA CGAGAACGAGGGTTCCTTCCCAGAGAAAGAGCAGATCCAACCAGTGAACAGTTTGGAGTG AGATTCGTCACAGAGAAGGAATACCGTACACTTCCTGATTCCATACATACAGAGGATTCA TCAGAGAGTGAGCTTTTATATGTGGAGTGA

Peptide Sequence

PEP ID	Os03t0602600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:22547535:22552000:1 gene:Os03g0602600 transcript:Os03t0602600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0602600-01)
Sequence	MHRMASLLLPPQFLCSLPCSTNSIRSHLHYKPHFLGNIMTKPKAKMRLLNRNVSSMAKKS SQDVAEGSSDDESDGETSKTKKRAPRRGRKKATIQASEGETQEGQVSTEEDESPEGTKKI KRRGRKKAATTASSSEEKDKAKEPKKRGRRKVKTVEELSDNEGEDLGEDLVPSNDRQEKI SANDLESKIAALLLEDTDDNDINNLIPLVCCFGPAKYSFIPSGRPANRLIDHEIHEGMKD MFWSPDQFVRAPGGSSSNVALALAASGGRVEFMGKLGDDDYGQSTLYHLNVNGVQTRAIK MDPSAFTAMSLMKVTGRGSLKMSCAKPCAEDCFVQTDINPAVLKEAKMFYYNSSALLEPT TRSSLSKAIEVSKKFGGVTFFDLNLPLPLWSSSKETKSLVKEAWEAADIIEITKQELEFL CGIKPSEKFGTKDNDKSKFTHYSPEVVTKLWHENLKVLFVTNGTSKIHYYTKEHDGWVRG TEDAPITPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKHAITCGVIDQWLLA RERGFLPRERADPTSEQFGVRFVTEKEYRTLPDSIHTEDSSESELLYVE

Transcript Sequence

Transcript ID	Os03t0602600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:22547535:22552000:1 gene:Os03g0602600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0602600-01)
Sequence	GTTTGAGGGATTTTCTTCTCCCGGGAGGCGGAAGAGGCGTAGGCGAGGATTCTTGTAGGA ATCCTCTCCTCTCCATTGATGCACCGAATGGCTTCTCTTCTTCTCCCCCCGCAGTTTCTT TGCTCCCTGCCTTGTAGTACCAACTCAATCAGGAGCCATTTACATTATAAGCCCCACTTC TTGGGAAACATTATGACTAAGCCTAAAGCTAAAATGAGGCTGCTCAACCGAAACGTAAGT TCCATGGCAAAGAAGAGCTCTCAAGATGTAGCAGAAGGTTCAAGTGATGATGAGAGTGAC GGCGAGACATCAAAAACCAAGAAAAGAGCTCCGAGACGTGGAAGAAAGAAAGCCACCATA CAAGCATCAGAAGGGGAAACACAAGAAGGTCAAGTGAGCACTGAAGAAGATGAATCCCCT GAAGGGACTAAGAAAATAAAAAGGAGGGGCCGCAAGAAAGCTGCAACTACTGCAAGCTCA TCGGAAGAGAAGGACAAAGCAAAAGAACCAAAGAAGAGGGGCAGAAGAAAAGTTAAGACT GTAGAGGAATTGAGTGACAATGAAGGGGAAGATCTGGGTGAAGATCTAGTGCCCTCCAAT GACAGGCAGGAGAAAATTTCAGCAAATGACCTAGAAAGTAAAATAGCAGCATTGCTATTA GAAGATACTGATGATAATGATATTAACAATTTAATCCCTCTTGTGTGCTGCTTTGGGCCT GCTAAGTACTCATTTATTCCTTCTGGAAGACCTGCTAATAGGCTGATAGATCATGAAATT CATGAGGGAATGAAAGACATGTTCTGGTCTCCAGATCAATTTGTAAGGGCACCAGGAGGA TCATCATCCAATGTTGCTCTTGCTTTAGCAGCTTCTGGTGGCCGGGTTGAATTCATGGGA AAACTAGGCGATGATGATTATGGTCAAAGTACATTATATCACTTGAACGTCAATGGAGTT CAAACTCGGGCAATTAAAATGGACCCTTCAGCGTTTACTGCCATGTCCTTGATGAAGGTC ACAGGTAGGGGTAGCTTGAAAATGAGCTGTGCTAAACCTTGTGCAGAGGATTGTTTTGTC CAAACTGATATCAACCCAGCTGTTTTAAAAGAGGCTAAGATGTTTTACTACAATTCTTCA GCTTTGCTTGAGCCCACGACACGATCATCATTGTCGAAAGCAATTGAGGTTTCCAAGAAA TTTGGTGGTGTAACATTCTTTGATCTCAATCTTCCACTGCCATTATGGTCGTCCAGTAAG GAGACCAAGTCACTTGTCAAGGAAGCATGGGAAGCTGCTGATATTATTGAAATCACTAAG CAGGAACTTGAGTTCTTGTGTGGCATTAAACCATCTGAGAAATTTGGTACGAAGGATAAT GATAAATCCAAATTCACTCACTACAGCCCAGAAGTTGTTACGAAATTGTGGCATGAAAAT CTCAAGGTCCTTTTTGTGACAAACGGCACTTCTAAGATTCATTATTACACAAAAGAGCAT GATGGCTGGGTTCGTGGCACAGAAGATGCACCAATTACTCCTTTCACCGGTGACATGTCA CAATCAGGTGACGCCATTGTTGCAGCTCTGATGAAGATGCTGGCAATTAACCCTCACCTG GTCACTGACAAGGATTACTTGCATACTGCAATGAAACATGCTATTACATGTGGTGTCATT GACCAGTGGTTACTTGCACGAGAACGAGGGTTCCTTCCCAGAGAAAGAGCAGATCCAACC AGTGAACAGTTTGGAGTGAGATTCGTCACAGAGAAGGAATACCGTACACTTCCTGATTCC ATACATACAGAGGATTCATCAGAGAGTGAGCTTTTATATGTGGAGTGAACAAAGAAAATG CAGAGGCATGTAATTTTCAATAGAGGGAAAAACCTACAGACATCTGGTGATTTTTCTTGA AGCACCATTTATGGGAACTGCTGCTCTTAACTGGAGTTGGTATTTAGAAGAACTAGTTGT AACCTGCAGGCTCTAGGTTTATTTTTTAACACAGGGTAATAGCCTCAAGATAAACTAACA CATCTGTATTGTCAAATTTTGGGTTAAGATTTTGTTGTAAATGTGCATGATTATGGGTGT CAGAAATTTTTCCTAGAAC