Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0598700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:22332335:22335094:1 gene:Os03g0598700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0598700-01)
Sequence

ATGGGGTCGGTGCTGTGCTGCTTGGCCGACGACGGCCGCCCCGTCTGCTGCTTCCGCCTC
CCATGGCCGATCTTCAACGCCGCTCACAACCACAACCACAACTCGGGTTCCATTGCTCGT
CCAAGAGCGGATACACGAGTTGCGCCTGATCAAGGAAGAATTAGTCTCACTGCTCCATCA
CAGCATGATTCGATGGATACTTTCCGCTGCCCGCCAAGGCCCTTGCCTTGGGATGATCCT
CGATTCAGCCATCATACAGAGCATCACCCACTAGTAGGAGGACATGACAAAGCTTCAACA
ACGTTCCACAAATCTGGTAGCCTTGGAGAAAGCAAGAATGCTGATAGCATATCTAATTCC
AAAGCTGTCAAGGATGATGGGCCTTCCACAGCTGTGAAGGATGATGGATCATCAGTAAAA
CACCATTCAGATGGTCTGCACATTGGCAAAGAGCAAGTACATGATCTTTTCGACTTTGAG
GACGACTGTCCAATATGCCTAGAAGAGTATGATTATGAGAATCCAAAGATGACATTACAA
TGCAACCACAATTTCCATCTTTGTTGTATTTATGAGTGGATGGAGAGAAGTCAAGCTTGC
CCAGTCTGCTCAAAGGTAATGCTGTTCCATGAGGATTCATGA

Peptide Sequence

PEP ID

Os03t0598700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:22332335:22335094:1 gene:Os03g0598700 transcript:Os03t0598700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0598700-01)
Sequence

MGSVLCCLADDGRPVCCFRLPWPIFNAAHNHNHNSGSIARPRADTRVAPDQGRISLTAPS
QHDSMDTFRCPPRPLPWDDPRFSHHTEHHPLVGGHDKASTTFHKSGSLGESKNADSISNS
KAVKDDGPSTAVKDDGSSVKHHSDGLHIGKEQVHDLFDFEDDCPICLEEYDYENPKMTLQ
CNHNFHLCCIYEWMERSQACPVCSKVMLFHEDS

Transcript Sequence

Transcript ID

Os03t0598700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:22332335:22335094:1 gene:Os03g0598700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0598700-01)
Sequence

AAAAAAAAAATCGATCCGCAAATGCGTCGGCGTTGCGTGCGAGCTCCGATCTCCTAAACC
TCCTCCAATTCCCTCAACGAAATCTCTCTCTCGATCCGACTCTGCTCTCTATCCGGCCTC
GATCACCCCCACCAACATCCTCCTCCGATTCCCTCGCCTTCTCCTTCTCCTCCTCCAACT
TCTCGATGACTTCCACTATACTAAGCTAGCTAGCCCCCGCCGATCCCCGCGGGGTTTTAG
TTTAGCTCCGCGCCACCCAATCGCCGCAGGTGATCTTTCCCGGTCAAGAACTCGCGATTC
GGGGGCGGATACGGAGGAAGGAAATCTGTGGTGGATTCGGATCGAGCTCTTCGTTTTCTT
GCTCTTTGTATAAATTGCGATCAGGGGCGGCGGAAACAAGGGTTCTTCTCTGTCTCTCTT
CATTAGCGCCGGCGACGAGGTGAGGTGAGGTGGTGGTGGAGGCGATCGAAATGGGGTCGG
TGCTGTGCTGCTTGGCCGACGACGGCCGCCCCGTCTGCTGCTTCCGCCTCCCATGGCCGA
TCTTCAACGCCGCTCACAACCACAACCACAACTCGGGTTCCATTGCTCGTCCAAGAGCGG
ATACACGAGTTGCGCCTGATCAAGGAAGAATTAGTCTCACTGCTCCATCACAGCATGATT
CGATGGATACTTTCCGCTGCCCGCCAAGGCCCTTGCCTTGGGATGATCCTCGATTCAGCC
ATCATACAGAGCATCACCCACTAGTAGGAGGACATGACAAAGCTTCAACAACGTTCCACA
AATCTGGTAGCCTTGGAGAAAGCAAGAATGCTGATAGCATATCTAATTCCAAAGCTGTCA
AGGATGATGGGCCTTCCACAGCTGTGAAGGATGATGGATCATCAGTAAAACACCATTCAG
ATGGTCTGCACATTGGCAAAGAGCAAGTACATGATCTTTTCGACTTTGAGGACGACTGTC
CAATATGCCTAGAAGAGTATGATTATGAGAATCCAAAGATGACATTACAATGCAACCACA
ATTTCCATCTTTGTTGTATTTATGAGTGGATGGAGAGAAGTCAAGCTTGCCCAGTCTGCT
CAAAGGTAATGCTGTTCCATGAGGATTCATGATCATAATGCTGCAACGTTTCTGTGATGT
TGGAGAGTGGAGACTCACGGGGACTGGATCACCTAGATTTGTGTACATAGCTTGACGAAA
ATCAAAGTCGCTAGATTGTTTGCTGAAACTTCCAGCGGCGCAAAGATTTTTTATTATTTT
TTTGTTTCTGTAGAGCATATAATTCTTTTCTCATTTTTCAGAAAAAATTGGTAGCTTGTG
TCAATCCACATATCACATTTCGATTGGATGTTACAGATGCGCGTTTGAGTGATTGCATTT
GCTTCTGATGCTGAAATACGAAACTTCTG