Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0597400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:22243187:22244608:-1 gene:Os03g0597400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1618 domain containing protein. (Os03t0597400-01)
Sequence

TTCCCCAACTGGGTGATGCTGGAGCGATTCGTCTTCCGCAGGGACGACGACACCAGGGCT
ACAGTACTGAGGGCATCCGGTTCCGGATCCCACGGGACCCCCTTCACCATCGCCTTCCGC
ATCGCCGACCCTCCGGCGATCTCCCGCCTGTACGTGCGGTGGCCGCAGGGCCCGGACCCG
GAGGAGATGGTGGCGTGCCCCCTCGTCGCCACCCACCGCAACCTCGTCCTCGTCTGCTTC
TGCTACATCGTCGAGTCCCCCTCCGGCCCGGCTTGCCCGCAGGACTACTTCATCTTCACC
GCGTCCGGCTCCGGCGACGGCGACGTCGACCACCACCCAGTTCCCTCGCCGCTACTCAAG
GCCCTCCCCCCATGTACCTACCATGATGAGGGCGACGGCAACGACCTATCCATGCGGTAT
CCGTTGGAGTTCCGGTCCGTCGGCATCCTGTGCCGAGGCGAAGAGTTCGCCGTCGCCGAG
CTGCAGGTCCTCAGAACCGCCAGTGGCAGAGTCAAAGCCAGGCTGTGCGTGCTCCGCTCG
GCCATATCCTCCTCCAAAGACGAAGATGAAGCAGAAGATGGAGATCATGGAGGCGGCGGC
CGGCGGCCGTGGGATATCATGGAGCTGCCGATCGTGTACGACGGCGACGAGGAGCGCTGC
GACATCTTCTACTGGACCACCGACGCCGTGATCGCCTTCCAAGACCACCTCTGCTGGGTG
GACTACGACCGAGGCATGCTCCTCTGCGACGTGCTGCGGACAAGCCCTAGAGTCGCCTTC
CTCCGGTTTCCTCTGGACAGCTCGATCATCCCTACCGGCAGACGATCTCGCCGCAATTTC
TCCCAGGTGTACCGCGGCGTGTCCGTCACCACCGCCGCCACCGGCGGCGCCGCCCTCAAG
TTCGCCGACGTCAGCCGGCACGACGGCAAGCTCCTGGGCTCCCTAGAACAAGGACGAGGA
GGCTACACCATCACCTGCCACACTCTGAGGTCGACGTTAGGGGCGGCCGCCATTGATGAC
GAGTGGAGCTGGAGCAAAGACTTCGCGATCGCGTCCGACGAGATTCTTCGGTCCTTCGAG
GGCGCCCCCGAGCTCGAGCCTCGTGAGGTTCTCCTGTTCCCTACCGTGAGCATGGACACG
CCGAGCGTCATGCACTTCCTCACCTGCGACTACGACCGCATGATCAGGAAGATGTCGGTG
GTGACCATTGACATAGCCAGCAAGATAGTGTTGTCGGTTGTTCCATATGTTAACGGGGAG
GAGGACCTTTCCGGTGAGGATGCCGACATGGTCAGGGCGAAGTCGGGCTATCCCCAGTCC
TTCCTCCCCTCAGAGTTTTCCAAGTACTTCAATTCAATCTAA

Peptide Sequence

PEP ID

Os03t0597400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:22243187:22244608:-1 gene:Os03g0597400 transcript:Os03t0597400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1618 domain containing protein. (Os03t0597400-01)
Sequence

FPNWVMLERFVFRRDDDTRATVLRASGSGSHGTPFTIAFRIADPPAISRLYVRWPQGPDP
EEMVACPLVATHRNLVLVCFCYIVESPSGPACPQDYFIFTASGSGDGDVDHHPVPSPLLK
ALPPCTYHDEGDGNDLSMRYPLEFRSVGILCRGEEFAVAELQVLRTASGRVKARLCVLRS
AISSSKDEDEAEDGDHGGGGRRPWDIMELPIVYDGDEERCDIFYWTTDAVIAFQDHLCWV
DYDRGMLLCDVLRTSPRVAFLRFPLDSSIIPTGRRSRRNFSQVYRGVSVTTAATGGAALK
FADVSRHDGKLLGSLEQGRGGYTITCHTLRSTLGAAAIDDEWSWSKDFAIASDEILRSFE
GAPELEPREVLLFPTVSMDTPSVMHFLTCDYDRMIRKMSVVTIDIASKIVLSVVPYVNGE
EDLSGEDADMVRAKSGYPQSFLPSEFSKYFNSI

Transcript Sequence

Transcript ID

Os03t0597400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:22243187:22244608:-1 gene:Os03g0597400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1618 domain containing protein. (Os03t0597400-01)
Sequence

CTTCCCCAACTGGGTGATGCTGGAGCGATTCGTCTTCCGCAGGGACGACGACACCAGGGC
TACAGTACTGAGGGCATCCGGTTCCGGATCCCACGGGACCCCCTTCACCATCGCCTTCCG
CATCGCCGACCCTCCGGCGATCTCCCGCCTGTACGTGCGGTGGCCGCAGGGCCCGGACCC
GGAGGAGATGGTGGCGTGCCCCCTCGTCGCCACCCACCGCAACCTCGTCCTCGTCTGCTT
CTGCTACATCGTCGAGTCCCCCTCCGGCCCGGCTTGCCCGCAGGACTACTTCATCTTCAC
CGCGTCCGGCTCCGGCGACGGCGACGTCGACCACCACCCAGTTCCCTCGCCGCTACTCAA
GGCCCTCCCCCCATGTACCTACCATGATGAGGGCGACGGCAACGACCTATCCATGCGGTA
TCCGTTGGAGTTCCGGTCCGTCGGCATCCTGTGCCGAGGCGAAGAGTTCGCCGTCGCCGA
GCTGCAGGTCCTCAGAACCGCCAGTGGCAGAGTCAAAGCCAGGCTGTGCGTGCTCCGCTC
GGCCATATCCTCCTCCAAAGACGAAGATGAAGCAGAAGATGGAGATCATGGAGGCGGCGG
CCGGCGGCCGTGGGATATCATGGAGCTGCCGATCGTGTACGACGGCGACGAGGAGCGCTG
CGACATCTTCTACTGGACCACCGACGCCGTGATCGCCTTCCAAGACCACCTCTGCTGGGT
GGACTACGACCGAGGCATGCTCCTCTGCGACGTGCTGCGGACAAGCCCTAGAGTCGCCTT
CCTCCGGTTTCCTCTGGACAGCTCGATCATCCCTACCGGCAGACGATCTCGCCGCAATTT
CTCCCAGGTGTACCGCGGCGTGTCCGTCACCACCGCCGCCACCGGCGGCGCCGCCCTCAA
GTTCGCCGACGTCAGCCGGCACGACGGCAAGCTCCTGGGCTCCCTAGAACAAGGACGAGG
AGGCTACACCATCACCTGCCACACTCTGAGGTCGACGTTAGGGGCGGCCGCCATTGATGA
CGAGTGGAGCTGGAGCAAAGACTTCGCGATCGCGTCCGACGAGATTCTTCGGTCCTTCGA
GGGCGCCCCCGAGCTCGAGCCTCGTGAGGTTCTCCTGTTCCCTACCGTGAGCATGGACAC
GCCGAGCGTCATGCACTTCCTCACCTGCGACTACGACCGCATGATCAGGAAGATGTCGGT
GGTGACCATTGACATAGCCAGCAAGATAGTGTTGTCGGTTGTTCCATATGTTAACGGGGA
GGAGGACCTTTCCGGTGAGGATGCCGACATGGTCAGGGCGAAGTCGGGCTATCCCCAGTC
CTTCCTCCCCTCAGAGTTTTCCAAGTACTTCAATTCAATCTAAGGGTGTGTTTAGTTCAC
GTCAAAATTGAAAGTTTGATTGAAATTGGAATGATGTGACGG