Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0597200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:22233268:22238894:-1 gene:Os03g0597200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:young seedling albino description:Pentatricopeptide repeat protein, Chloroplast development (Os03t0597200-01)
Sequence	ATGCCCCGCGTTTGCGCCGCCCCTCGGGCGCCGCCGCCGCCGTGCCCGTGCCATGTCGGA GTAGGGCCGCTTCGGCCGAGGTGGCGCGCCTCCCGGCACGGCCCTCTCCGGGCGGCTGGC CAGGAGCAGCTCCTCACCGCCCTGCGCGAGCAGCCGGACCCCGACGCGGCGCTCCGGATG CTCAACGCGGCGCTGGCGCGGGACGACTTCGCGCCCGGCCCCGAGGTCTACGAGGAGATC ATCCGCAAGCTCGGCGCGGTCGGGGCCCTCGACCTCATGAAGGTGCTCGTCGCGGAGATG CGGCGGGAGGGGCACCAGGTGAAATTGGGCGTAGTCCACTCCTTCTTGGACAGCTACGAG GGGCAGCAGCTGTTCGACGATGCCGTCGACCTGATTCTGAATCAACTCCAACCATTGTTT GGCATTCAGGCAGACACCGTGGTGTACAATCACCTTCTCAATGTTCTTGTGGAGGGGAGC AAAATGAAACTCCTTGAATCAGTGTACTCGGAGATGGGTGCTAGGGGAATCAAGCCTGAT GTTGTCACATTCAACACACTGATGAAGGCGTTGTGCCGAGCACATCAGGTCAGGACTGCA GTTCTCATGCTCGAGGAAATGTCTAGCAGAGGCGTGGCGCCTGACGAGACGACGTTTACC ACCCTGATGCAAGGATTTGTCGAGGAGGGGAGCATCGAGGCTGCACTGAGGGTCAAAGCC AGGATGTTGGAAATGGGGTGCTCGGCGACGAAGGTGACGGTTAATGTTTTGATTAATGGG TACTGCAAGCTAGGGAGGGTGGAGGATGCTCTTGGGTATATACAGCAGGAGATTGCCGAT GGGTTTGAGCCTGACCAGATCACATATAACACTTTTGTTAATGGTCTCTGCCAAAATGAT CATGTCGGCCATGCCCTCAAAGTCATGGATGTGATGGTTCAGGAGGGCCATGATCCTGAT GTTTTCACCTACAATATCGTTGTGAATTGCCTTTGTAAAAATGGACAGCTTGAAGAGGCA AAAGGAATTCTGAATCAGATGGTGGATCGGGGTTGTTTGCCTGACATTACCACATTCAAC ACTCTCATTGCTGCCTTATGCACGGGGAATCGACTTGAGGAAGCCTTGGACCTTGCACGT CAGGTTACAGTGAAGGGAGTCTCTCCAGATGTTTATACTTTCAATATTCTGATTAACGCG CTCTGCAAAGTAGGCGATCCTCATCTTGCACTTCGATTGTTTGAAGAGATGAAGAACAGT GGATGCACCCCGGATGAAGTAACATACAATACTTTGATTGACAATCTTTGCTCACTTGGG AAGCTTGGTAAAGCATTGGATTTGTTAAAAGATATGGAGTCCACTGGTTGTCCTCGAAGT ACAATTACATATAACACTATAATTGACGGGTTATGCAAGAAAATGAGAATAGAAGAAGCA GAAGAAGTTTTTGATCAAATGGATCTGCAAGGCATTTCGAGGAATGCAATCACATTCAAT ACTCTCATCGATGGTTTGTGCAAGGACAAAAAGATTGATGATGCTTTTGAGCTTATTAAT CAAATGATAAGTGAAGGGTTGCAACCTAACAATATCACTTACAATTCTATTCTAACTCAT TATTGCAAGCAAGGTGACATAAAAAAGGCTGCGGATATTTTAGAAACTATGACTGCAAAT GGATTTGAAGTGGATGTTGTTACGTACGGTACTCTGATTAACGGTCTATGCAAGGCTGGT AGGACACAGGTTGCTTTGAAGGTACTCAGAGGTATGCGGATAAAAGGGATGAGGCCTACT CCAAAAGCTTACAATCCTGTGCTCCAGTCTCTCTTCAGACGGAATAATATCAGAGATGCC CTGAGTCTTTTCAGGGAGATGGCAGAGGTTGGTGAGCCTCCTGATGCTTTGACATATAAG ATTGTTTTTCGTGGGCTCTGTCGTGGTGGAGGGCCTATTAAAGAAGCTTTTGATTTCATG TTGGAGATGGTTGATAAGGGGTTCATACCAGAGTTCTCATCCTTCCGTATGCTAGCTGAA GGTCTATTAAACCTGGGTATGGATGATTACTTCATTAGAGCCATTGAAATAATCATGGAA AAGGTCGACCTCAGAGAGTCTGATGTTTCTGCAATAAGGGGATATCTCAAGATCCGCAAA TTTTATGATGCATTAGCAACCTTTGGCCGTTTCCTGGAGATCAACAACCCTCAATGGAGT TACCGATGA

Peptide Sequence

PEP ID	Os03t0597200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:22233268:22238894:-1 gene:Os03g0597200 transcript:Os03t0597200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:young seedling albino description:Pentatricopeptide repeat protein, Chloroplast development (Os03t0597200-01)
Sequence	MPRVCAAPRAPPPPCPCHVGVGPLRPRWRASRHGPLRAAGQEQLLTALREQPDPDAALRM LNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYE GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPD VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEA EEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTH YCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPT PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFM LEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSAIRGYLKIRK FYDALATFGRFLEINNPQWSYR

Transcript Sequence

Transcript ID	Os03t0597200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:22233268:22238894:-1 gene:Os03g0597200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:young seedling albino description:Pentatricopeptide repeat protein, Chloroplast development (Os03t0597200-01)
Sequence	CTCCTGTTCCCCTCTGCCTGCCTTCACGGAGAACACGCCGCCGCACGCCCGCAAAGTTGT CGCTCCGCCGCCGGGTCCTGCGGCCACTTCCTCCCTCTCCCTGTGCATGCGCTCTCTTCC CCACCTGTACTTTACTTTAGCTGCTCCTCTGCCCAGTTGCCCACGACCTGACGACCCGGA CATGGCGCAGGCTGAGGCGGGGACGACGACATCGCCGGCGGGTTGACGCAGAAAGGAGCG ACCACCCGAGGGCTCCGCTGGATTTTCAGGTAGCTGAGCTGAGCTGAACTGAACCCCAAT GCCCCGCGTTTGCGCCGCCCCTCGGGCGCCGCCGCCGCCGTGCCCGTGCCATGTCGGAGT AGGGCCGCTTCGGCCGAGGTGGCGCGCCTCCCGGCACGGCCCTCTCCGGGCGGCTGGCCA GGAGCAGCTCCTCACCGCCCTGCGCGAGCAGCCGGACCCCGACGCGGCGCTCCGGATGCT CAACGCGGCGCTGGCGCGGGACGACTTCGCGCCCGGCCCCGAGGTCTACGAGGAGATCAT CCGCAAGCTCGGCGCGGTCGGGGCCCTCGACCTCATGAAGGTGCTCGTCGCGGAGATGCG GCGGGAGGGGCACCAGGTGAAATTGGGCGTAGTCCACTCCTTCTTGGACAGCTACGAGGG GCAGCAGCTGTTCGACGATGCCGTCGACCTGATTCTGAATCAACTCCAACCATTGTTTGG CATTCAGGCAGACACCGTGGTGTACAATCACCTTCTCAATGTTCTTGTGGAGGGGAGCAA AATGAAACTCCTTGAATCAGTGTACTCGGAGATGGGTGCTAGGGGAATCAAGCCTGATGT TGTCACATTCAACACACTGATGAAGGCGTTGTGCCGAGCACATCAGGTCAGGACTGCAGT TCTCATGCTCGAGGAAATGTCTAGCAGAGGCGTGGCGCCTGACGAGACGACGTTTACCAC CCTGATGCAAGGATTTGTCGAGGAGGGGAGCATCGAGGCTGCACTGAGGGTCAAAGCCAG GATGTTGGAAATGGGGTGCTCGGCGACGAAGGTGACGGTTAATGTTTTGATTAATGGGTA CTGCAAGCTAGGGAGGGTGGAGGATGCTCTTGGGTATATACAGCAGGAGATTGCCGATGG GTTTGAGCCTGACCAGATCACATATAACACTTTTGTTAATGGTCTCTGCCAAAATGATCA TGTCGGCCATGCCCTCAAAGTCATGGATGTGATGGTTCAGGAGGGCCATGATCCTGATGT TTTCACCTACAATATCGTTGTGAATTGCCTTTGTAAAAATGGACAGCTTGAAGAGGCAAA AGGAATTCTGAATCAGATGGTGGATCGGGGTTGTTTGCCTGACATTACCACATTCAACAC TCTCATTGCTGCCTTATGCACGGGGAATCGACTTGAGGAAGCCTTGGACCTTGCACGTCA GGTTACAGTGAAGGGAGTCTCTCCAGATGTTTATACTTTCAATATTCTGATTAACGCGCT CTGCAAAGTAGGCGATCCTCATCTTGCACTTCGATTGTTTGAAGAGATGAAGAACAGTGG ATGCACCCCGGATGAAGTAACATACAATACTTTGATTGACAATCTTTGCTCACTTGGGAA GCTTGGTAAAGCATTGGATTTGTTAAAAGATATGGAGTCCACTGGTTGTCCTCGAAGTAC AATTACATATAACACTATAATTGACGGGTTATGCAAGAAAATGAGAATAGAAGAAGCAGA AGAAGTTTTTGATCAAATGGATCTGCAAGGCATTTCGAGGAATGCAATCACATTCAATAC TCTCATCGATGGTTTGTGCAAGGACAAAAAGATTGATGATGCTTTTGAGCTTATTAATCA AATGATAAGTGAAGGGTTGCAACCTAACAATATCACTTACAATTCTATTCTAACTCATTA TTGCAAGCAAGGTGACATAAAAAAGGCTGCGGATATTTTAGAAACTATGACTGCAAATGG ATTTGAAGTGGATGTTGTTACGTACGGTACTCTGATTAACGGTCTATGCAAGGCTGGTAG GACACAGGTTGCTTTGAAGGTACTCAGAGGTATGCGGATAAAAGGGATGAGGCCTACTCC AAAAGCTTACAATCCTGTGCTCCAGTCTCTCTTCAGACGGAATAATATCAGAGATGCCCT GAGTCTTTTCAGGGAGATGGCAGAGGTTGGTGAGCCTCCTGATGCTTTGACATATAAGAT TGTTTTTCGTGGGCTCTGTCGTGGTGGAGGGCCTATTAAAGAAGCTTTTGATTTCATGTT GGAGATGGTTGATAAGGGGTTCATACCAGAGTTCTCATCCTTCCGTATGCTAGCTGAAGG TCTATTAAACCTGGGTATGGATGATTACTTCATTAGAGCCATTGAAATAATCATGGAAAA GGTCGACCTCAGAGAGTCTGATGTTTCTGCAATAAGGGGATATCTCAAGATCCGCAAATT TTATGATGCATTAGCAACCTTTGGCCGTTTCCTGGAGATCAACAACCCTCAATGGAGTTA CCGATGAAGCAGAATACATAACTGGGACAAATTACTTGAATAGTATTAGGGAAATCTCAA AGAGTGGATGGAATTTTTGCTGGTTGCTTAGGGGAATGAAAGTCTTAAATTGATTATAAT AGGTGATTGTGTTCATTCCTCGGTAGGGATGAAGTCAGAGCATGAAGAAGCTCATCTTGG TGCAGAAACTTAGCTTATTGGAACAGAATCTAGGTGCTAGGTGCTGTCTGCTGCCAGATT AGTACCTAGCGCCTTAACGAACAGTGGCTGCAGATCCCATCCGCTTATTTTGATCAAATC TGATTCATTTTCTATTCCCTAATAAAAGCCTGATTCATCTTCATTGCATATGGTCGAACC TAAGGCTATCATGTACAGTTAGATCCCAACCCTTCGTTCTATGAGATGTTGTCCCATAGA AGAAATATCTTCTGAGTATATCCTAGTACTCTAAAATGTTCACTAATATGTTCAACTTAA TTAGTTTTGTAACCTCCTAAAATAGTTCTATTAGTTTTGTAACCTTCTAAAATATGAATT AGTTTTGATCTGGCTGATCTTCCTTTGGTTAGGTACTACAAATTCTTAATTCAGACACAT ATTTGGTTTTCTGAAAATTTCATCTATATTTGGTCAGGCTGGCATTTGAAGTTCTTATTT TAGTCATATACTTTAGTTTTTTACAATTTTCATTTGTTAAAGATGATAATTTATTTGTTA GCACAGAGCATGTTTAGAAATCTGAAATATTAAAACATGCATGTTCTCATGAAAATAAAT GTTAGTTTTGTTTAAATTCCAATCCACATATTTTTTAATCAATGTCAGAAATTACCATGC TTCACTTATTGACCTAGTATATGTATAGTATTTGATGGATCATGTTGATTTGGATTTGCT CTACTAACTTGTTCCTATTCCAACAAAGATTTATATGCATCTTGTGTTCTAAAAATGCTA CATGTGTCAAGTTGAAGGAAAATTCTAGCTATGTGGTGTCCTAATTTTGGTAGATGGTAC CTAGTAATAGATAACAATTCTGTTTTATAGTGATGAGTAAATTTGACTAAATCGAGTCTA GAAAGTGATATAATTTTCTGGAGAAGTCTTTCTTGGTGATTTGGGAAAGGGCCATTACCT ATACTGATATGAAATCTGGAACTAGAAAGATCTGAACATCAATGTTCTAAAGTTTTTTGT CTGAATTTCTTGTGCAGAATATGAAGGAAGGTGGATCTGGAATAGGTATTTACATGTCCT GTTCAGATTCCTGCAATCTGATAAACTACTGCAATCCAATAAACTCTTGATCTATTGTTT TCTGGATTTTTTTTTGGGTGTAGAGTATTAGGAAGGTATTTGCTTTGTTACAGGGGTTGG TTGGATGTTCAGAAAACCAAAATCTGAATACACTAACACATTAGCCAGTGTTTTATTTTA GTTTATGTTATTCTGACCACAACACCAGCAGCTTCAATTGGTAGTAGAACACACTCTGAT GCAATTGGTAGGTGTACAACAGATAATTTGCCGTGAATGCTACTTAATTCAACCATTTTT TTTCCATACAGTGCTATACAATGGCACACAAACATCCTTCAGTTGGACTCAAATTTGTTT CAGCTTTGCTATTTTACAGTCACCTGCAGTTTTTTCTAATCCATCAGTCGATTTTGTTGG CAGTAGATTCTGCTTCAAGATCTGTGCACGCAGTGGAGGCACATTTGGTTACAGGCTGCT TCACCAGACCCGTTAACCCATGGGCCATGGATGCTCCCCTAGTAGCATATGTTGTTTTTT CCACCAACTGCCTCTTGTAAATCAAGATGCTCCCCTCTCCACATTTGCTGCAGACTTCCT CCCCGTGGATCTGAGACGAACTCCGGCGACCGGCGGCGTCTACGAGCCAGCGTTCACCAA TTTCTCAGGTATATGAGTCGTCATCTATGTGCATCTGCTACTTTTTTTTTTTGGCTGATT GGACGGGTTGAGAAGGAGGTGTTTGGGGGGAAGAGAGCAGAATAATCCCATTGCGAAACA AGCGAGGAAGGCTTGTCGATGGTGGCGGCGGTGGCCTTGATTATCGAAGATGCATGCGTG AGGGAAACTGTGTGCCAGGGAGGCAAGCTTGGTGGCACACATCGAGTGGTATATCTTCAG GTTACTGCTAGATCGAAGATCCTTTGGTGCTTGATGTGTGCTGTTGGTTTGGTAGTTTTG GTGGTACTGTGGCAAGTGAAGACACGAAAGAGGAGCTAGTAGAGGCTTAGAGTCTGGAGT CGTAATCGATGTGCAAGAGCATCAATGCCATCAGTTCCTCTGGGCAGCACGGCTCTGCAC TTTTCATCTGAGAAACATATATATTTTGTTGATTCTGATTTTGACGAATTATCCAAACAT GCAGTTTTTTTGGGTTCCGCGTGCAAAGACGATTTTGATCTCCTGGCAGATTTAAGGGTG GTGATTTTGTTTTTGTTTTGCATGTAGATGATGCATTTTGTAAATCATTTTAGGTTGCCC CTTTTTTTTTTGTTTTTGCGAGTTCTTACTGAATTTGGATAAGTTCTGGTTGATTGGATC GACATTCTGTACATTTGCAAGGGGATTCTATGGGTTTTTGCTTATTGCTAATCAAATTAT TTTGTGAGTTTTGGTTTATTGGATGGTGAGAAAGCAAGATTACATGGATTTTGCTTCATT GCTGATTTTGTCGAAATTTATCAGGCATGCGGTTTTTGGTTTCTTGAATACGAACTACAC GGACAGTACTCCTATATTCTTGGTGATTTTGAAGTGTATTTGTTATTTTGGGGAGGTGGA ATGGTTAATATTTTGTTCAAGGGGACACTTCTACAGATGTATACATTACTTTTGTCATTT TCAGCATAACAAAGAGATTTGGTAGATTCAGAATTCAGATGGCAACTACACGTCGAATGA TGTATGCGAAGACATGGGGAATTCTGATGCTGATTCCACTGAAGAAAGCTAAACATAATT TTAATTTATTTACCAACTCATTTTTCTGTCAACACATTTGCTAGATAGTTGCTACCCGAT AAACGACATCTTGAAATCTGAGTTATACTTCAGTCTATTTTTTTTCC