Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0596900-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:22219267:22227139:-1 gene:Os03g0596900 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP-binding signal recognition particle SRP54, G-domain containing protein. (Os03t0596900-01);Hypothetical conserved gene. (Os03t0596900-02);Hypothetical conserved gene. (Os03t0596900-03)
Sequence

ATGCCTGAGGAAGACCCAGCATCGGCAATGGAGGAGACCGCTGTAGCGAATGGAGGAGCA
GCTGATGATGTTGCTGCTCCTGATAAGGACAATGACATTAAAGAAAAAGCTGGCAAGGGC
AACGAGGTAGCAGTAGAGAATAAGAATGCTGAAGAGCAGAATAAAGGAGGCTCAGAGAAT
GGTACCAAGGGTCCATCTGATGGAGATGTTGAGATGGCGGAGGCTGAGACTGCAAAGGAG
AGTGATGTGAAGCAGTTGGACACTGAGGATGCGAAAAAGGATGGTGCGCAGGATGCAGAT
GCAAATGAAGAAAAGAATACCAAGGACACAGAAGGTGAAGATGTCAAGATGGCTGAGGCT
GAGGCCGAGGCAGGAAATGCCGATGTCAAGGATACAGCAGAGAAGGAAGATAAAGATGAG
AACACCAATACGGAGAAGCAGGAATTGAAAGATGCAAAAGAAAGTGGTTCTGAGAAGCAG
GAGGAATTGAAGGAGCAAGATAAAAGTGGTTCTGAAAAGCAGGAGGAATTGAAGGAGCAA
GATAAAAGTGGTTTAGCTGAGTACGAGGAAAAGAAAGCAGAAGAAGAGAGTGGTGCTGAG
AAGCAAGGGGAAGAGGAAGCAGAGGAAAAGGGCTCTGCTGATAATGACAACGAGGAAGGA
GACAAAAATGCAAATATCAGTGATGAACATCTGAAAAAAGATGGTGGAAAGGATGGAAAC
AAAGATGAAGCAGAAGAAGAGGAGGTCAGTGAAGCAGACAAGAAGGTAGAAGAGAATAAG
GAGGAAACACCGAAGAACAAGAAGGCAAGAAGTGCAAGGGATAGAAGCCAAGGTAAGGAT
AAGAAACAGGATGGGTCCAAATCCAGGGAAGCGAAGAGCTTACTGAACACCGCCAGCCCT
TATGGTACTGATCGCCCTCAGCGTGAGAGGAAAACAGTGGAGAGGTTGGTTGAAGTGATT
GAAAAGGAGCCCAACAGGAACTTCGTAGTTGAGAAGGGTCGTGGTACTCCGTTGAAGGAT
ATACCAAGTGTGGCGCACAGAATATCAAGGAAAAAACCTGCTGATCTTAAGTTTCTTCAC
AATGTTCTTTTTGGCAGGAAAGGCAAGGTTTGA

Peptide Sequence

PEP ID

Os03t0596900-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:22219267:22227139:-1 gene:Os03g0596900 transcript:Os03t0596900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP-binding signal recognition particle SRP54, G-domain containing protein. (Os03t0596900-01);Hypothetical conserved gene. (Os03t0596900-02);Hypothetical conserved gene. (Os03t0596900-03)
Sequence

MPEEDPASAMEETAVANGGAADDVAAPDKDNDIKEKAGKGNEVAVENKNAEEQNKGGSEN
GTKGPSDGDVEMAEAETAKESDVKQLDTEDAKKDGAQDADANEEKNTKDTEGEDVKMAEA
EAEAGNADVKDTAEKEDKDENTNTEKQELKDAKESGSEKQEELKEQDKSGSEKQEELKEQ
DKSGLAEYEEKKAEEESGAEKQGEEEAEEKGSADNDNEEGDKNANISDEHLKKDGGKDGN
KDEAEEEEVSEADKKVEENKEETPKNKKARSARDRSQGKDKKQDGSKSREAKSLLNTASP
YGTDRPQRERKTVERLVEVIEKEPNRNFVVEKGRGTPLKDIPSVAHRISRKKPADLKFLH
NVLFGRKGKV

Transcript Sequence

Transcript ID

Os03t0596900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:22219267:22227139:-1 gene:Os03g0596900 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP-binding signal recognition particle SRP54, G-domain containing protein. (Os03t0596900-01);Hypothetical conserved gene. (Os03t0596900-02);Hypothetical conserved gene. (Os03t0596900-03)
Sequence

GGAGGAGACGGGTAGGGGGGGAGGAAGCCGAGGAGGCGACGCGACTAGCTGCTGCTGCTG
CTGCTCCTGCTCCACTCCGCCCTAGGTCAGGTAGTGCAATAAGGGTTTCTCGGGATGCCT
GAGGAAGACCCAGCATCGGCAATGGAGGAGACCGCTGTAGCGAATGGAGGAGCAGCTGAT
GATGTTGCTGCTCCTGATAAGGACAATGACATTAAAGAAAAAGCTGGCAAGGGCAACGAG
GTAGCAGTAGAGAATAAGAATGCTGAAGAGCAGAATAAAGGAGGCTCAGAGAATGGTACC
AAGGGTCCATCTGATGGAGATGTTGAGATGGCGGAGGCTGAGACTGCAAAGGAGAGTGAT
GTGAAGCAGTTGGACACTGAGGATGCGAAAAAGGATGGTGCGCAGGATGCAGATGCAAAT
GAAGAAAAGAATACCAAGGACACAGAAGGTGAAGATGTCAAGATGGCTGAGGCTGAGGCC
GAGGCAGGAAATGCCGATGTCAAGGATACAGCAGAGAAGGAAGATAAAGATGAGAACACC
AATACGGAGAAGCAGGAATTGAAAGATGCAAAAGAAAGTGGTTCTGAGAAGCAGGAGGAA
TTGAAGGAGCAAGATAAAAGTGGTTCTGAAAAGCAGGAGGAATTGAAGGAGCAAGATAAA
AGTGGTTTAGCTGAGTACGAGGAAAAGAAAGCAGAAGAAGAGAGTGGTGCTGAGAAGCAA
GGGGAAGAGGAAGCAGAGGAAAAGGGCTCTGCTGATAATGACAACGAGGAAGGAGACAAA
AATGCAAATATCAGTGATGAACATCTGAAAAAAGATGGTGGAAAGGATGGAAACAAAGAT
GAAGCAGAAGAAGAGGAGGTCAGTGAAGCAGACAAGAAGGTAGAAGAGAATAAGGAGGAA
ACACCGAAGAACAAGAAGGCAAGAAGTGCAAGGGATAGAAGCCAAGGTAAGGATAAGAAA
CAGGATGGGTCCAAATCCAGGGAAGCGAAGAGCTTACTGAACACCGCCAGCCCTTATGGT
ACTGATCGCCCTCAGCGTGAGAGGAAAACAGTGGAGAGGTTGGTTGAAGTGATTGAAAAG
GAGCCCAACAGGAACTTCGTAGTTGAGAAGGGTCGTGGTACTCCGTTGAAGGATATACCA
AGTGTGGCGCACAGAATATCAAGGAAAAAACCTGCTGATCTTAAGTTTCTTCACAATGTT
CTTTTTGGCAGGAAAGGCAAGGTTTGATTTTAAAGGTCATATACTCCAGTTCTCTGGTTT
CGTGTGGCATGAAAGTGATGAAAAGCAGAGGGCGAAGGCTAAGGAGAAGCTTGACAAATG
TGTGAAAGACATGTTGTTGGAACTCTGTTGGATCCTTGCTATTCCGACTCCAAAAGCAAA
CATCAGAAAGGAAGATATTGTGGCAAAGCTGTTGGATTTCATTGCTGAACCTCATGCTAT
GGCTGATTCCGGGCATTCGGATGATCAGGGGTCGAATTCTCGGAAACGCAAGAGAGGAAG
CACACCCAAGAGTTCTAGCAAGAAATTTGATGATGATGACGACATAACTCCAAGTAAAAA
GCGGAATAAAGCTCTGGAATATGATACTGATGAAGATGAGGATGATGCGGATCCCATGAA
GTCAGATAGTGAGGAAGATGACTATGATTCTGAGAAAGAGAAGGCAAAGAAGAACTCCTC
AGATGCAAAAGATACCGCTAGTAAAAAGAAGGCTGCAACAGGGAGCAGCCACAAGACAGG
TACTCCAAGGACAGTGAGCAAGAGTTCAAGCAAAACACCATCTTCAAAAGTTTCCAAGGA
AAAGGAGAGCCCTGAGGACAGTGCAAAAGTCTTCTCTAGGAAGAAGAAATCTGTCACACC
AAAGCGTCCTTCAAGCTCTGAAAAGGAGATAAAAGACAAGAAGTCATCAGGTAAAAAGGT
GACAAAGGGTAAAGGAGAATCAGCAGAAGTAGGTCTACCCAGTAAGGACGAGCTGAGGAA
AACCATAACTGAAATCCTTAAAAAAGTTGATTTCAACACGGCTACTTTCAGTGACATTCT
TAAAAAGCTTGAGGATCGCTACAAGATTGACCTGACACCACGAAAGTCAGCTATCAAAAT
CATGATCCAAGAGGAGCTAACCAGGCTGTCGAAAGAAGACGACGATGAGGATGAGGACGA
GGATGGAAATGAAGACGCTGAGAAGAAAAAACCACAACATCAAGCCAAGGAGGTGGTGGC
CTGAGCTGAGCATTGGTGAAACCTCGTAGGTTTAGCACCCGCTGTTAATTATTATCCGCT
GTTAATTATTATTTTGTACCTGCATGTATGCCGAACCTTGTGCTTGCATCATGGGCAGCC
CCCATGTTAATTATTGTTAATCCGTGTCCACAGATAGCCAAAAACCATATCCCTGTTTGG
TAATGTCAAAAACAAGGTTCGCTTAGGCAGCCCTACACCTGTAGCTGACTTGGGAGGCAA
TTTCTTAGGTAACTGTTGATGTCCAAAAACTCTGCAATGGGATGTGGCAGAGCATCATGT
AATGAATCATGTTCGTCATAGGTTTGAATAACAAGTGGACGTATTAGGCTGT