Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0594400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:22092018:22095340:-1 gene:Os03g0594400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:monosaccharide transporter 2 description:Monosaccharide transporter 2. (Os03t0594400-01)
Sequence	ATGGCAGCTGCAACCGCAGCTGATGTTGCCGAGGATACGGCCAGTGTGTACTCCGGCAAG CTTACCCTCTACGTCTTCCTCACCTGCGGCGTCGCGGCGACCGGCGGCCTCATCATCGGC TATGACATCGGCATCTCTGGTGGTGTGACATCGATGGACACGTTCCTGGGGAAGTTCTTC CCGTCGGTTCTCCACCAAGAACAGACGGCGCAGGGCACAAGCCAGTACTGCAAGTTCAAC AGCCAGCCGCTGACCGCGTTCACCTCGTCGCTGTACCTCGCGGCGCTCGTGGCCTCCTTC TTCGTCGCGTCCTTCACGCGCGCGCTGGGCAGGAAGTGGTCCATGTTCGGCGGCGGCGTC TCCTTCCTCGCCGGTGCCACCCTCAACGGCGCCGCGCGGAACGTCGCCATGCTCATCGTC GGCCGCATCCTCCTCGGCATCGGCGTCGCCTTCTGTGGTCTGTCCACTCCGATATACTTG TCTGAGATGGCGCCACCGCGGCTGCGTGGCATGCTCAACATCGGCCTCCAGCTGATGATC ACCGTGGGCATCTTCTCCGCCAATCTCGTCAACTACGGTGCGGCCAAGATCAGGGGTGGC TGGGGGTGGCGTGTCAGCCTCGGCCTCGCTGCCGCCCCGGCATGCGTCATCGCCGTGGGC TCGCTCTTCCTCCCGGACTCACCGAGCTCCCTCATCAACCGTGGCCGCCACGAGCAGGCG CGGCGGGTGCTGCGGCGCATCCGTGGCACCGACGAGGTGGACGACGAGTACGGCGACCTC GTCGCAGCAGCCAGCGAGATCGAGGTGTATTCCGGCTGCTCCGCGAGACGACGGCCGTGG CGCGACGTCCTGCAGCGCAGGTACCGGCCGCAGCTCGCCATGGCCGTCCTCATCCCCTTC TTCCAGCAGCTCACCGGCATCAACGTCATCATGTTCTACGCGCCCGTGCTGTTCAAGACC ATCGGCCTCGGAGGAGACGCGTCGCTCATGTCGGCGGTCATCACCGGGCTGGTCAATATC GTTGCCACGTTCGTGTCCATCGCCACCGTCGACAGCCTTGGCCGACGCAAGCTCTTGTTC CAGGGAGGCTGCCAGATGCTTGTGAGCCAGGTTATCATTGGAACGCTGATCGGTGTGGTG TTTGGTACGAGTGGCGATGGCAACATCTCGAGGGCGTTGGCGGTCTGCATCGTGGTGTTC ATCTGCGTCTACGTCGCCGGCTTCGCTTGGTCGTGGGGCCCGCTTGGCGTCCTCCTGCCG AGCGAGATCTTCCCGCTGGAGGTCCGGCCGGCGGGGCAGAGCATCAGCGTGGCCGTGAAC ATGCTCTGCACGTTCGCCGTCGCGGAGGCCTTCCTCCCGATGCTCTGCCACATGAGGTTC GGCCTCTTCTACTTCTTTAGCGGATGGGTGCTCGTGATGACGCTCTTCGTCTCGGCCTTC CTGCCTGAGACCAAGGGCGTGCCGATCGAGAAGATGACCGTCGTGTGGAGAACGCACTGG TTTTGGGGTAGATTTTACTGTAACCAGGATGCAGATGCACACGTTCAAGTGGCAAACAGC AAAGTTTGA

Peptide Sequence

PEP ID	Os03t0594400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:22092018:22095340:-1 gene:Os03g0594400 transcript:Os03t0594400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:monosaccharide transporter 2 description:Monosaccharide transporter 2. (Os03t0594400-01)
Sequence	MAAATAADVAEDTASVYSGKLTLYVFLTCGVAATGGLIIGYDIGISGGVTSMDTFLGKFF PSVLHQEQTAQGTSQYCKFNSQPLTAFTSSLYLAALVASFFVASFTRALGRKWSMFGGGV SFLAGATLNGAARNVAMLIVGRILLGIGVAFCGLSTPIYLSEMAPPRLRGMLNIGLQLMI TVGIFSANLVNYGAAKIRGGWGWRVSLGLAAAPACVIAVGSLFLPDSPSSLINRGRHEQA RRVLRRIRGTDEVDDEYGDLVAAASEIEVYSGCSARRRPWRDVLQRRYRPQLAMAVLIPF FQQLTGINVIMFYAPVLFKTIGLGGDASLMSAVITGLVNIVATFVSIATVDSLGRRKLLF QGGCQMLVSQVIIGTLIGVVFGTSGDGNISRALAVCIVVFICVYVAGFAWSWGPLGVLLP SEIFPLEVRPAGQSISVAVNMLCTFAVAEAFLPMLCHMRFGLFYFFSGWVLVMTLFVSAF LPETKGVPIEKMTVVWRTHWFWGRFYCNQDADAHVQVANSKV

Transcript Sequence

Transcript ID	Os03t0594400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:22092018:22095340:-1 gene:Os03g0594400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:monosaccharide transporter 2 description:Monosaccharide transporter 2. (Os03t0594400-01)
Sequence	AGCTTAGCTAACTCAATGATTAAAATCTCGCCAGATCCCTCCTGCGTTATCAATCCACTG AGAAGTAAGCGAACGAGATCGCCTGGGCCGGCTCGTCGGAGAAGGCTCACACGCGACGCG CGCCATGGCAGCTGCAACCGCAGCTGATGTTGCCGAGGATACGGCCAGTGTGTACTCCGG CAAGCTTACCCTCTACGTCTTCCTCACCTGCGGCGTCGCGGCGACCGGCGGCCTCATCAT CGGCTATGACATCGGCATCTCTGGTGGTGTGACATCGATGGACACGTTCCTGGGGAAGTT CTTCCCGTCGGTTCTCCACCAAGAACAGACGGCGCAGGGCACAAGCCAGTACTGCAAGTT CAACAGCCAGCCGCTGACCGCGTTCACCTCGTCGCTGTACCTCGCGGCGCTCGTGGCCTC CTTCTTCGTCGCGTCCTTCACGCGCGCGCTGGGCAGGAAGTGGTCCATGTTCGGCGGCGG CGTCTCCTTCCTCGCCGGTGCCACCCTCAACGGCGCCGCGCGGAACGTCGCCATGCTCAT CGTCGGCCGCATCCTCCTCGGCATCGGCGTCGCCTTCTGTGGTCTGTCCACTCCGATATA CTTGTCTGAGATGGCGCCACCGCGGCTGCGTGGCATGCTCAACATCGGCCTCCAGCTGAT GATCACCGTGGGCATCTTCTCCGCCAATCTCGTCAACTACGGTGCGGCCAAGATCAGGGG TGGCTGGGGGTGGCGTGTCAGCCTCGGCCTCGCTGCCGCCCCGGCATGCGTCATCGCCGT GGGCTCGCTCTTCCTCCCGGACTCACCGAGCTCCCTCATCAACCGTGGCCGCCACGAGCA GGCGCGGCGGGTGCTGCGGCGCATCCGTGGCACCGACGAGGTGGACGACGAGTACGGCGA CCTCGTCGCAGCAGCCAGCGAGATCGAGGTGTATTCCGGCTGCTCCGCGAGACGACGGCC GTGGCGCGACGTCCTGCAGCGCAGGTACCGGCCGCAGCTCGCCATGGCCGTCCTCATCCC CTTCTTCCAGCAGCTCACCGGCATCAACGTCATCATGTTCTACGCGCCCGTGCTGTTCAA GACCATCGGCCTCGGAGGAGACGCGTCGCTCATGTCGGCGGTCATCACCGGGCTGGTCAA TATCGTTGCCACGTTCGTGTCCATCGCCACCGTCGACAGCCTTGGCCGACGCAAGCTCTT GTTCCAGGGAGGCTGCCAGATGCTTGTGAGCCAGGTTATCATTGGAACGCTGATCGGTGT GGTGTTTGGTACGAGTGGCGATGGCAACATCTCGAGGGCGTTGGCGGTCTGCATCGTGGT GTTCATCTGCGTCTACGTCGCCGGCTTCGCTTGGTCGTGGGGCCCGCTTGGCGTCCTCCT GCCGAGCGAGATCTTCCCGCTGGAGGTCCGGCCGGCGGGGCAGAGCATCAGCGTGGCCGT GAACATGCTCTGCACGTTCGCCGTCGCGGAGGCCTTCCTCCCGATGCTCTGCCACATGAG GTTCGGCCTCTTCTACTTCTTTAGCGGATGGGTGCTCGTGATGACGCTCTTCGTCTCGGC CTTCCTGCCTGAGACCAAGGGCGTGCCGATCGAGAAGATGACCGTCGTGTGGAGAACGCA CTGGTTTTGGGGTAGATTTTACTGTAACCAGGATGCAGATGCACACGTTCAAGTGGCAAA CAGCAAAGTTTGAAATGCACAATGCCACTGCTGTCTGATTTTATACAGATGTAGCAAATG TGAGATGCGTATTTTGGGACTGGTTAATTTGCTGCTGATATCCAGCATGCGCATCTCGAA GTAGCGCGGAGCAAAGTTCAAATATC