Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0591300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:21910439:21913786:1 gene:Os03g0591300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 140 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0591300-01)
Sequence	ATGCAGGGCGACCCAGGGTACGGGTACGGTGGCTACGGCTACGGCTACGGCTATGGCTAC GGCGGCGCCGGCTACGACATGGCCGGCTACGGCGGCGGCGGTGGAGGGTACTACACGAGC GATCCGTACAATGCCGCTCCTGCTGCTTATGAAGACCCGCTCGCCGTCGCTGGTCGGAGG CAGCACGACTTCCCGGCGCCGCTCACCGGTGTCGAGTTCCAGCCGTCGGACACCTGCCCC AAGAACTACGTCATCTTCGACCAGACCTACGACCGGAGCCGGGTCATGTTCCACCCTTCG CTGGCCAACAACCTGGGCAACTCCGGCGGCGGCTACGACCACCACCACCACTGCGGCTAC GGCGGCTTCGAGCAGGACTACGCCAGCAAGAGCGCCTACTATGGCGTCGAGGACGACGGC GGCGGCGGGTGCTCGATCCGGCAGAAGGAGGACACCGACGAGATCGACGCGCTGATGAGC ACGGAGGACGGCGAGGAGGAGGACGACGTCCTGAGCACGGGCCGCACGCCTGGGTGCCGG GCCGGGGGCTCGCCGGACTCCACGTGCTCGTCCGGCGCGTCCAGGTCCGACTGCGGCGGC GGGCGGAAGCCCGAGGCCGGCGGCGGCGAGAGGAAGAAGGAGCGGATGAAGAAGATGATG CGGACTCTCAAGGGGATCATCCCCGGCGGCGACAGGATGGACACCCCCGCCGTCCTCGAC GAGGCCGTCCGCTACCTCAAGTCGCTCAAGGTGGAGGTCAAGAAGCTCGGCGTGCGTGGC TCAAGCAGCTAG

Peptide Sequence

PEP ID	Os03t0591300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:21910439:21913786:1 gene:Os03g0591300 transcript:Os03t0591300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 140 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0591300-01)
Sequence	MQGDPGYGYGGYGYGYGYGYGGAGYDMAGYGGGGGGYYTSDPYNAAPAAYEDPLAVAGRR QHDFPAPLTGVEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNLGNSGGGYDHHHHCGY GGFEQDYASKSAYYGVEDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDVLSTGRTPGCR AGGSPDSTCSSGASRSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLD EAVRYLKSLKVEVKKLGVRGSSS

Transcript Sequence

Transcript ID	Os03t0591300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:21910439:21913786:1 gene:Os03g0591300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 140 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0591300-01)
Sequence	ATCCATCCATCTATCCGTCTCACTTCCTCCCCTGTTCCGTTCCATCGCCCGATCTGCTTC TTCTACTTCTGTCTGCTCTTAATTGGAGTACCAAGTTATCACCTGCAGTTCCCTGATAAT TTTGGGAAGAGGCAAGGACAGGATGCCCTGGGCAGGGACGACGTCCGTTCGGCTGGCGGT GTTCTTCCGCGTCATCCTGTGATCGATCTGGTCACGGGCAAGGCGATCGGTCACCGGCGG TGAGGGGATCCGAGCCGTGCCGCGGCGGAGGACATGTGCGTTGGGTTCAACGGGAGGAGC CTTGACACCGTCGTTATGACAAGTGGCGCCGTCGCATATTACTACAGATTGATGCAAGTG TGCCAGGCCGAATACTTCCGCCAGCTGCTCAAGCCCGTGACGTAGATTAGCTCACGCACA CATTCCATCCAAACAGCCTGAAACCCCCAAACAAACTAACCAAATCAATTTTGAATTGGA CCAAAAAAAAAAAGCCAAGCTCCAGTTAGCAAAACACCTTTGAATTCATACTTGTTTAGT TTCGTTTCAATCAAAAGCAAAACATTTCCTGCTTTCCCAGACAAACACAGCCACACAAAA CCAGCACGAATTTGAGCAGCACCCGATGCAGGGCGACCCAGGGTACGGGTACGGTGGCTA CGGCTACGGCTACGGCTATGGCTACGGCGGCGCCGGCTACGACATGGCCGGCTACGGCGG CGGCGGTGGAGGGTACTACACGAGCGATCCGTACAATGCCGCTCCTGCTGCTTATGAAGA CCCGCTCGCCGTCGCTGGTCGGAGGCAGCACGACTTCCCGGCGCCGCTCACCGGTGTCGA GTTCCAGCCGTCGGACACCTGCCCCAAGAACTACGTCATCTTCGACCAGACCTACGACCG GAGCCGGGTCATGTTCCACCCTTCGCTGGCCAACAACCTGGGCAACTCCGGCGGCGGCTA CGACCACCACCACCACTGCGGCTACGGCGGCTTCGAGCAGGACTACGCCAGCAAGAGCGC CTACTATGGCGTCGAGGACGACGGCGGCGGCGGGTGCTCGATCCGGCAGAAGGAGGACAC CGACGAGATCGACGCGCTGATGAGCACGGAGGACGGCGAGGAGGAGGACGACGTCCTGAG CACGGGCCGCACGCCTGGGTGCCGGGCCGGGGGCTCGCCGGACTCCACGTGCTCGTCCGG CGCGTCCAGGTCCGACTGCGGCGGCGGGCGGAAGCCCGAGGCCGGCGGCGGCGAGAGGAA GAAGGAGCGGATGAAGAAGATGATGCGGACTCTCAAGGGGATCATCCCCGGCGGCGACAG GATGGACACCCCCGCCGTCCTCGACGAGGCCGTCCGCTACCTCAAGTCGCTCAAGGTGGA GGTCAAGAAGCTCGGCGTGCGTGGCTCAAGCAGCTAGCGCGCGCCACAACATCCACAGTC AAAAATCTTCCTACTTTCACCCTTTGGCAGATAAGACGAGACTGACTGGAACTCTTGTTC GAAAAAGCCCAAAAGCCGAGACTGCCATGATCGTCCTGCCTGCCAACCTCTCGATCGTCC CGAGGATCGATCGGTGGAGAAGAAGGATTCGGGAAACAGAGCTCCGTCGCCGCACGCTTT TCTTGCTTTATTTCGTTCTCGATGGCTCTAGCTGCGTGCGTGCATGGATTGTGTTGCTTT CTTTTTCTTTTCTACTTCTTTTCTTTTTTCAGAACTTGCTGCTTTTATTTCTTGTTCCTT TCAATGGTGCCTCGTGTTGTAACTATCATGCATGCTGATGATATACACCGTGTTTTTTTT GCTATCCTCGTGCT