Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0588200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:21733006:21737915:1 gene:Os03g0588200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Frigida-like family protein. (Os03t0588200-01)
Sequence	ATGGACCCCGCCGCCGCTGCCGCCGCCGGCGGCGGCGCCGGTCCAAAATCTGATGCGGCC CCTTCCGCACCGGCGCTGCACGGCCTGCCGGTGGAGATGACGACGGGGGAGATGGAGGCC GCCATCGCCGCCCTCCCCGCGAAGAAGGAGGCGCTGCGCGAGGCCTTCGACGTCCTCGCC GCCTGCTCGCCCTTCCCGCTCCCCTTCGCCTGGGGCGACCTCGACTCCTACATCTCCTCG CTCCAGTCGTCGATCGACCGGCGGTTCGGCCAGCTCCGGGTCCTCGAGGCGGCCCGCCCC GCGCTTGCAGGTCCCGCCGCCGCCTCCACAAGCGACGGCGAGAAGGGCGGGAAGCAGGAA GAGGACAGCGACGAGGAGGAGAAAGAGGAGGAGGAGGAAGAGGTTGAGGAGGAAGAAGTT GAGGAAGAGGAGGAGATTGAGGAGGAAGAGGTCGAGGAGGAGATTGAGGAGGAAGAAGAG GAGATTGAGGAGGAGGAAGAGGAAGTCAGAGAAGAGGTTCAGGAGGCCGGGGAGGAGGTC GACGAGGAGCAGCAGGGAGCCAACGAGGAGATGCAGAAGTCCAAAGAAGATGCTGATGAG TCTTCCAAGAGTGCGATTCCAGTGCAGAAACAGGAAGAGGATGAGGCAGAGAAGGAGATA ATTGAGGCCAAAGATGAGGAGCAACATGGGGACAAGCTGGCCTCTCAAGAACACGACATT GGGGAGAATGGGGATGTGGATGCCCAAGGGGTTCAGCAGGTGGCTGACGGTGAGACAATG GAGGCCAAATCGGAGGAGCAAAATGAGGCTAAGGTGACATCTATGGAGCATGACATCGAG GAGGGCGACGAGAAAGCGTCTCGAGAACAAGGCAATCGAGCTCTTCCAAGTTGCAGCGAT CATCTTAGGGGAGTGTGTGCTGGCATGGACGTCAGGGGGCTGTTGAAATTGGTGTGTAAG AACCAGAGCATTTGCCTCTGGCATGAGTACCCCGTGGTGATGCGCCATGCCCCAGATGCT GCTGCCCTTGTCCTCCAAGTCGTCCAGGGTTTCCTTCTCAGCAAGAAGATGAAGACCACC AAGGTTTGGGGTAACTGTGTTGGGCTGATTCGGTGCTTACCTGCAGTGAATGCCTCGCTG TCCTCAGACACAATGAAGCAGGCCAAGCAGCTGGCGAAGGATTGGAAGGAGATGATTGAC AGCACTGGAAGCAGCAGGGACGTTTTGAACCTGTCCTCCTGGGGCCTCCTGTATTTTCTC ATTTCTTACAACATTGTATCGGAGTTTTCTGTTGATGAGATCTTCTGTATCTTTGGTACT CTTTCACGCAAACAACAGAAAAAGAACTGCATCGAACTCTGCAAAGGTCTTGGGCTTGTC AATAGGATCACTGACTTAATTGATTATTTGATTGGAAATGGTCAACAACTCGAAGCCTTA CTGTTAACACAAGCTTTTAATTTGATAGACAAATATACTCCACTTTCTCTTCTGAAGGGA TATGTTGAAAGGGCAAAACAGAATGCTCTGGATATAATTAATATGAATTCTCCACGCAAG TCTCTGAGTCCACTTATAACGAAGGAGGTGGATAGTCTAATGGTTGCACAGAACATAGTT CAACAGCAGATCACTGATTTCAACGTGCGCAGTGGTATGCTGGCAGAAATGAAGAAATTA TTAGATCAATATGCAACGAAGCGAAGTTCAGGGGATGCTTGTTCTGCCTCAACTTCAAAT TCAGAGCAGCAGCAGCAGCAGCAGCAAAAGCATACAAACAAGAAGCGCAAGAGAGAGCAG CTCGAGCAGCAACAGCACAGGGGACAAGAGATCCAGCAGCAGAAGCAACAGATTAAACCA CAAGGGAAGAAGGGGCAGCAGCAAACTAAGCCAGAACAGAAGAAGCAACAACAGCTAAAC ACAAATAAGCCTCAAGAGCAACAACAACAGCAGCAGCAGAAGCAACAAATTAAGCCGCAA GAGAAGATGGGGAAGGAGCAAACTAAGCCAGAAGAGCAGCAGCAGCAACAAAAGACAAAT AGGCCTCAAGAACAACAGCATAAGAAGCCACAGAAAAAACAGCAGCAGCAACAACAACAA CAGCAAAGTAAGCCACAAGAGAAACGCCCAAGGCCATGCACCACCAAGCTGCCAACACCA TCTATCCCTGCTTCCATATCACCTATGGTTCCGCATATTGTGCAGGTTGATTCTGTTGGG CATTCACCATATGCTGCAATGCCTATATCTCACACTTATGCTGCCCAACTAGGTTGGCCT GGAAATCAGAGCGCTGCATTTGCACAAAATGTTGGAGTTTCTCAATTTATGGGTATGTTT AATCCCCAACAGCCTAATTATCCCTTCTACCGTCATCCACCGTTCTATCCCAGGTAG

Peptide Sequence

PEP ID	Os03t0588200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:21733006:21737915:1 gene:Os03g0588200 transcript:Os03t0588200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Frigida-like family protein. (Os03t0588200-01)
Sequence	MDPAAAAAAGGGAGPKSDAAPSAPALHGLPVEMTTGEMEAAIAALPAKKEALREAFDVLA ACSPFPLPFAWGDLDSYISSLQSSIDRRFGQLRVLEAARPALAGPAAASTSDGEKGGKQE EDSDEEEKEEEEEEVEEEEVEEEEEIEEEEVEEEIEEEEEEIEEEEEEVREEVQEAGEEV DEEQQGANEEMQKSKEDADESSKSAIPVQKQEEDEAEKEIIEAKDEEQHGDKLASQEHDI GENGDVDAQGVQQVADGETMEAKSEEQNEAKVTSMEHDIEEGDEKASREQGNRALPSCSD HLRGVCAGMDVRGLLKLVCKNQSICLWHEYPVVMRHAPDAAALVLQVVQGFLLSKKMKTT KVWGNCVGLIRCLPAVNASLSSDTMKQAKQLAKDWKEMIDSTGSSRDVLNLSSWGLLYFL ISYNIVSEFSVDEIFCIFGTLSRKQQKKNCIELCKGLGLVNRITDLIDYLIGNGQQLEAL LLTQAFNLIDKYTPLSLLKGYVERAKQNALDIINMNSPRKSLSPLITKEVDSLMVAQNIV QQQITDFNVRSGMLAEMKKLLDQYATKRSSGDACSASTSNSEQQQQQQQKHTNKKRKREQ LEQQQHRGQEIQQQKQQIKPQGKKGQQQTKPEQKKQQQLNTNKPQEQQQQQQQKQQIKPQ EKMGKEQTKPEEQQQQQKTNRPQEQQHKKPQKKQQQQQQQQQSKPQEKRPRPCTTKLPTP SIPASISPMVPHIVQVDSVGHSPYAAMPISHTYAAQLGWPGNQSAAFAQNVGVSQFMGMF NPQQPNYPFYRHPPFYPR

Transcript Sequence

Transcript ID	Os03t0588200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:21733006:21737915:1 gene:Os03g0588200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Frigida-like family protein. (Os03t0588200-01)
Sequence	GATCCGCTTTGCCGCAACACGAGAGAGGAAGGAATCCCTCACGCCGTTCTCGTCTCGCCG TCGGCGCGGCGTGACGGCGTCGCGATGGACCCCGCCGCCGCTGCCGCCGCCGGCGGCGGC GCCGGTCCAAAATCTGATGCGGCCCCTTCCGCACCGGCGCTGCACGGCCTGCCGGTGGAG ATGACGACGGGGGAGATGGAGGCCGCCATCGCCGCCCTCCCCGCGAAGAAGGAGGCGCTG CGCGAGGCCTTCGACGTCCTCGCCGCCTGCTCGCCCTTCCCGCTCCCCTTCGCCTGGGGC GACCTCGACTCCTACATCTCCTCGCTCCAGTCGTCGATCGACCGGCGGTTCGGCCAGCTC CGGGTCCTCGAGGCGGCCCGCCCCGCGCTTGCAGGTCCCGCCGCCGCCTCCACAAGCGAC GGCGAGAAGGGCGGGAAGCAGGAAGAGGACAGCGACGAGGAGGAGAAAGAGGAGGAGGAG GAAGAGGTTGAGGAGGAAGAAGTTGAGGAAGAGGAGGAGATTGAGGAGGAAGAGGTCGAG GAGGAGATTGAGGAGGAAGAAGAGGAGATTGAGGAGGAGGAAGAGGAAGTCAGAGAAGAG GTTCAGGAGGCCGGGGAGGAGGTCGACGAGGAGCAGCAGGGAGCCAACGAGGAGATGCAG AAGTCCAAAGAAGATGCTGATGAGTCTTCCAAGAGTGCGATTCCAGTGCAGAAACAGGAA GAGGATGAGGCAGAGAAGGAGATAATTGAGGCCAAAGATGAGGAGCAACATGGGGACAAG CTGGCCTCTCAAGAACACGACATTGGGGAGAATGGGGATGTGGATGCCCAAGGGGTTCAG CAGGTGGCTGACGGTGAGACAATGGAGGCCAAATCGGAGGAGCAAAATGAGGCTAAGGTG ACATCTATGGAGCATGACATCGAGGAGGGCGACGAGAAAGCGTCTCGAGAACAAGGCAAT CGAGCTCTTCCAAGTTGCAGCGATCATCTTAGGGGAGTGTGTGCTGGCATGGACGTCAGG GGGCTGTTGAAATTGGTGTGTAAGAACCAGAGCATTTGCCTCTGGCATGAGTACCCCGTG GTGATGCGCCATGCCCCAGATGCTGCTGCCCTTGTCCTCCAAGTCGTCCAGGGTTTCCTT CTCAGCAAGAAGATGAAGACCACCAAGGTTTGGGGTAACTGTGTTGGGCTGATTCGGTGC TTACCTGCAGTGAATGCCTCGCTGTCCTCAGACACAATGAAGCAGGCCAAGCAGCTGGCG AAGGATTGGAAGGAGATGATTGACAGCACTGGAAGCAGCAGGGACGTTTTGAACCTGTCC TCCTGGGGCCTCCTGTATTTTCTCATTTCTTACAACATTGTATCGGAGTTTTCTGTTGAT GAGATCTTCTGTATCTTTGGTACTCTTTCACGCAAACAACAGAAAAAGAACTGCATCGAA CTCTGCAAAGGTCTTGGGCTTGTCAATAGGATCACTGACTTAATTGATTATTTGATTGGA AATGGTCAACAACTCGAAGCCTTACTGTTAACACAAGCTTTTAATTTGATAGACAAATAT ACTCCACTTTCTCTTCTGAAGGGATATGTTGAAAGGGCAAAACAGAATGCTCTGGATATA ATTAATATGAATTCTCCACGCAAGTCTCTGAGTCCACTTATAACGAAGGAGGTGGATAGT CTAATGGTTGCACAGAACATAGTTCAACAGCAGATCACTGATTTCAACGTGCGCAGTGGT ATGCTGGCAGAAATGAAGAAATTATTAGATCAATATGCAACGAAGCGAAGTTCAGGGGAT GCTTGTTCTGCCTCAACTTCAAATTCAGAGCAGCAGCAGCAGCAGCAGCAAAAGCATACA AACAAGAAGCGCAAGAGAGAGCAGCTCGAGCAGCAACAGCACAGGGGACAAGAGATCCAG CAGCAGAAGCAACAGATTAAACCACAAGGGAAGAAGGGGCAGCAGCAAACTAAGCCAGAA CAGAAGAAGCAACAACAGCTAAACACAAATAAGCCTCAAGAGCAACAACAACAGCAGCAG CAGAAGCAACAAATTAAGCCGCAAGAGAAGATGGGGAAGGAGCAAACTAAGCCAGAAGAG CAGCAGCAGCAACAAAAGACAAATAGGCCTCAAGAACAACAGCATAAGAAGCCACAGAAA AAACAGCAGCAGCAACAACAACAACAGCAAAGTAAGCCACAAGAGAAACGCCCAAGGCCA TGCACCACCAAGCTGCCAACACCATCTATCCCTGCTTCCATATCACCTATGGTTCCGCAT ATTGTGCAGGTTGATTCTGTTGGGCATTCACCATATGCTGCAATGCCTATATCTCACACT TATGCTGCCCAACTAGGTTGGCCTGGAAATCAGAGCGCTGCATTTGCACAAAATGTTGGA GTTTCTCAATTTATGGGTATGTTTAATCCCCAACAGCCTAATTATCCCTTCTACCGTCAT CCACCGTTCTATCCCAGGTAGCACTTGCTGCAATGGGTTGTTGAGTAAACTAGAGAAAGA TATAGATGCTTACAGGAGTTTTCCTCTTGAATTGTGTTGGCTCAATTGCCTCATGTTGTG TTGGACATTTATTTACATTAACATGTATATACAATTTTGG