Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0587600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:21701041:21703525:1 gene:Os03g0587600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, CCHC-type domain containing protein. (Os03t0587600-01)
Sequence	ATGGAGATTATGCAACAGCTCGCCGCCGCCGCCACCGCCACCGCCACCGCCACGGCAACG CCCCTGTGCCTTCCTGAACCCCCTCCGACGGCGATGACGACGGCGCAGGTGGAGGCCGCC ATCGCGACGCTGCACGGCAAGAAGCAGGGCCTCCGCGAGGCCTACGACAGCCTCGTCCTC CACTCGCCCATCCCCCTCCCCTTCCGCTGGTCCGACCTCGACTCCCACCTCTCCTCCCTC CAGTCCTCCATCCACGCCCGCTTCAGCCAGCTGCAGGCCCTCCAGGCTTCCCGCCCCGCG CCCCCCGCCGCCGCCGCCGCGAGCCACGACGAGGACGTCGAGATGGAGGACGTCCAGGAA CAGGGAGAGGACGAGGTGATGGCGCCTCCGTCTACGGTGCAGGTCAAGGAGGAGCCTGTG GAGGCGGCGGCATGCGCGTCGAATACCGCCGGCGAGCGTGCCGGTGTCGGGCAAGATGGG TTCGTTCGACCCGGCGGGATGGCGGCGGCGAAGATGGCGTCTCCGTCAAAGGTGCAGGTC AAGGAGGAACCCGTGGAGGTGAGTCCATCTCCTCCGGCCGGCGCCACGGGTCTTACGGCG GCGGCATGCGCGAGCATGGACGCCCCGAGACTAACCGACGTCTGCAAGCGCGCCGGCGGT GGCGGCGGCCAAGGTTTGTGCGCGCGAAACGGTAGTGGTACAGCGCAGTCACCCCCGATC CCTAGTTGCCCTGTGCTCCAGCAGCAGCACACGGCCGGCGCCCCGAACGGCAGCCACCCT GTGCTACGGCAACACGCCGCTAACGCCATGAACGCCGGCCACTCGGCCGCGTTCCGGCCG CAGCAGCACATGGGTAAACCCCGGGACACGTGTGACTTGCGGAAGGCCGCCGCACCGAAC ACCGGAGATCGCCTGCCGCTGCAATGGCGGCAGCAGCGCGTGCACGCTAATCTCACGTGC CCCTTGCCGCCACCGGTGGTCGCGGGCTCCTCCTCCTCGCCGCCACAGCAGCGCGTGGGC GTGTTCCCCTCGCCAACGCCGCAGATCGTGGGCTCCTCGCCGCCGCCGCCATCACAGGCG CGCGTGGGAGAGGCTAATGTAACGAACCCATCGCGGCAGCAGTTCACAGCTAGCGCGCCA CACGCGGGCGATGGCCAGCTCCAGAAGCGGCCGCCGTGGCAGCGGCTGCAGCGCGTGGGC GTGGCTAATCCCATGAACGCCGGTGACCTGCCGCCCCAGAAGCCGCACTTCACGGCCAAC GCAAGAAACGCCGGAGAACACCCGTTCCAGGAGCAGCAGCAGCCGCCGCCCGTGGCCAAA CCCACGGACGCCGCCGCCGGTGACCTGCTTCCTCAGCAGAAGCAGTTGATGGCCAACGCA CCAAACGCCGGAGAACACTTGCTCCCGGAGCAACAGAAGCAGCAGCCCGTGACAGCTGCA AAACCCGCGAACGCGCCGCCTCTGCAGCACGCGGCGAACGCCACCAACCCAGCCGTTCTC CGGCGGCAGCGGCAGCGGCAGTGGGTTCGACTTCGACCACCGACCGCCACTAACCTGCCG CAAACGAAGCAGGAGCAGCATCATCTGTTCATGGCTGACGACGGCGCCAACGCCCGCAAT CCCCTGTCGCCGCCGCCGCCGTGCGGCATGGCCAAACCCCCCAACTCCGGTGACCCGCTG ACGGATCAGAACAATCAGCAGCTCATGGCGAACACCCACTCTGCCCCTACACCGGTTTCC ACACCATTGGTTGCATCGAACCAGAGTGAATCATCAGCCATGACGACGACGACGACGACG AACAGCAACCAAAACTCCGGCGGCGGTCGCACCGGCCCGCAACCCGTAGCGGCCGGCGCT GCTCCAAATCCGGCCGGCAACCAGCAGCAAGGGCAGCGGAAAGGTGGTGCAAACAGGCGA GGCGGACGAGGCCAAGGCAACAAGAACAACAACGTTGCTAATACCAATATTAGCAACATG AGCAAGGTGATTGGCAAGGGCAACAAGGGGCAGGGCAATGGAAACCCCCAGCTCAACAAG AATGGGAACCCCCAGTTCAACAAGAACGTGCCGGGTGATCATCACCAGAAGAACAAGAAT GCAGGGCAGCTTTGCTACAGGTGCGGGTGCAGGGGGCACTGGTCGCGCATCTGCCGCACT CCTGAGCATCTGGTGAAGCTTTATCAGCAGGACAGAAAGGCCAAACTGCAAGCAGGAGCG AATACGAATACGGTTTATGTGGGAGCCATGACGGATTAG

Peptide Sequence

PEP ID	Os03t0587600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:21701041:21703525:1 gene:Os03g0587600 transcript:Os03t0587600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, CCHC-type domain containing protein. (Os03t0587600-01)
Sequence	MEIMQQLAAAATATATATATPLCLPEPPPTAMTTAQVEAAIATLHGKKQGLREAYDSLVL HSPIPLPFRWSDLDSHLSSLQSSIHARFSQLQALQASRPAPPAAAAASHDEDVEMEDVQE QGEDEVMAPPSTVQVKEEPVEAAACASNTAGERAGVGQDGFVRPGGMAAAKMASPSKVQV KEEPVEVSPSPPAGATGLTAAACASMDAPRLTDVCKRAGGGGGQGLCARNGSGTAQSPPI PSCPVLQQQHTAGAPNGSHPVLRQHAANAMNAGHSAAFRPQQHMGKPRDTCDLRKAAAPN TGDRLPLQWRQQRVHANLTCPLPPPVVAGSSSSPPQQRVGVFPSPTPQIVGSSPPPPSQA RVGEANVTNPSRQQFTASAPHAGDGQLQKRPPWQRLQRVGVANPMNAGDLPPQKPHFTAN ARNAGEHPFQEQQQPPPVAKPTDAAAGDLLPQQKQLMANAPNAGEHLLPEQQKQQPVTAA KPANAPPLQHAANATNPAVLRRQRQRQWVRLRPPTATNLPQTKQEQHHLFMADDGANARN PLSPPPPCGMAKPPNSGDPLTDQNNQQLMANTHSAPTPVSTPLVASNQSESSAMTTTTTT NSNQNSGGGRTGPQPVAAGAAPNPAGNQQQGQRKGGANRRGGRGQGNKNNNVANTNISNM SKVIGKGNKGQGNGNPQLNKNGNPQFNKNVPGDHHQKNKNAGQLCYRCGCRGHWSRICRT PEHLVKLYQQDRKAKLQAGANTNTVYVGAMTD

Transcript Sequence

Transcript ID	Os03t0587600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:21701041:21703525:1 gene:Os03g0587600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, CCHC-type domain containing protein. (Os03t0587600-01)
Sequence	AAGAATCGATCGCGATGGAGATTATGCAACAGCTCGCCGCCGCCGCCACCGCCACCGCCA CCGCCACGGCAACGCCCCTGTGCCTTCCTGAACCCCCTCCGACGGCGATGACGACGGCGC AGGTGGAGGCCGCCATCGCGACGCTGCACGGCAAGAAGCAGGGCCTCCGCGAGGCCTACG ACAGCCTCGTCCTCCACTCGCCCATCCCCCTCCCCTTCCGCTGGTCCGACCTCGACTCCC ACCTCTCCTCCCTCCAGTCCTCCATCCACGCCCGCTTCAGCCAGCTGCAGGCCCTCCAGG CTTCCCGCCCCGCGCCCCCCGCCGCCGCCGCCGCGAGCCACGACGAGGACGTCGAGATGG AGGACGTCCAGGAACAGGGAGAGGACGAGGTGATGGCGCCTCCGTCTACGGTGCAGGTCA AGGAGGAGCCTGTGGAGGCGGCGGCATGCGCGTCGAATACCGCCGGCGAGCGTGCCGGTG TCGGGCAAGATGGGTTCGTTCGACCCGGCGGGATGGCGGCGGCGAAGATGGCGTCTCCGT CAAAGGTGCAGGTCAAGGAGGAACCCGTGGAGGTGAGTCCATCTCCTCCGGCCGGCGCCA CGGGTCTTACGGCGGCGGCATGCGCGAGCATGGACGCCCCGAGACTAACCGACGTCTGCA AGCGCGCCGGCGGTGGCGGCGGCCAAGGTTTGTGCGCGCGAAACGGTAGTGGTACAGCGC AGTCACCCCCGATCCCTAGTTGCCCTGTGCTCCAGCAGCAGCACACGGCCGGCGCCCCGA ACGGCAGCCACCCTGTGCTACGGCAACACGCCGCTAACGCCATGAACGCCGGCCACTCGG CCGCGTTCCGGCCGCAGCAGCACATGGGTAAACCCCGGGACACGTGTGACTTGCGGAAGG CCGCCGCACCGAACACCGGAGATCGCCTGCCGCTGCAATGGCGGCAGCAGCGCGTGCACG CTAATCTCACGTGCCCCTTGCCGCCACCGGTGGTCGCGGGCTCCTCCTCCTCGCCGCCAC AGCAGCGCGTGGGCGTGTTCCCCTCGCCAACGCCGCAGATCGTGGGCTCCTCGCCGCCGC CGCCATCACAGGCGCGCGTGGGAGAGGCTAATGTAACGAACCCATCGCGGCAGCAGTTCA CAGCTAGCGCGCCACACGCGGGCGATGGCCAGCTCCAGAAGCGGCCGCCGTGGCAGCGGC TGCAGCGCGTGGGCGTGGCTAATCCCATGAACGCCGGTGACCTGCCGCCCCAGAAGCCGC ACTTCACGGCCAACGCAAGAAACGCCGGAGAACACCCGTTCCAGGAGCAGCAGCAGCCGC CGCCCGTGGCCAAACCCACGGACGCCGCCGCCGGTGACCTGCTTCCTCAGCAGAAGCAGT TGATGGCCAACGCACCAAACGCCGGAGAACACTTGCTCCCGGAGCAACAGAAGCAGCAGC CCGTGACAGCTGCAAAACCCGCGAACGCGCCGCCTCTGCAGCACGCGGCGAACGCCACCA ACCCAGCCGTTCTCCGGCGGCAGCGGCAGCGGCAGTGGGTTCGACTTCGACCACCGACCG CCACTAACCTGCCGCAAACGAAGCAGGAGCAGCATCATCTGTTCATGGCTGACGACGGCG CCAACGCCCGCAATCCCCTGTCGCCGCCGCCGCCGTGCGGCATGGCCAAACCCCCCAACT CCGGTGACCCGCTGACGGATCAGAACAATCAGCAGCTCATGGCGAACACCCACTCTGCCC CTACACCGGTTTCCACACCATTGGTTGCATCGAACCAGAGTGAATCATCAGCCATGACGA CGACGACGACGACGAACAGCAACCAAAACTCCGGCGGCGGTCGCACCGGCCCGCAACCCG TAGCGGCCGGCGCTGCTCCAAATCCGGCCGGCAACCAGCAGCAAGGGCAGCGGAAAGGTG GTGCAAACAGGCGAGGCGGACGAGGCCAAGGCAACAAGAACAACAACGTTGCTAATACCA ATATTAGCAACATGAGCAAGGTGATTGGCAAGGGCAACAAGGGGCAGGGCAATGGAAACC CCCAGCTCAACAAGAATGGGAACCCCCAGTTCAACAAGAACGTGCCGGGTGATCATCACC AGAAGAACAAGAATGCAGGGCAGCTTTGCTACAGGTGCGGGTGCAGGGGGCACTGGTCGC GCATCTGCCGCACTCCTGAGCATCTGGTGAAGCTTTATCAGCAGGACAGAAAGGCCAAAC TGCAAGCAGGAGCGAATACGAATACGGTTTATGTGGGAGCCATGACGGATTAGGGGTTAT AAGATGGGTACATTGATTATATATCTTTGTGCGTGTAGCATACCCATTTTCGAGTTATCT TAATGTTATCGTACTAGACATGCTTTTCGTGTTTCCTACAGCATTTCCCCCCCTCAAATT CTTAGTTACAGTTATGTTATCGGTTTTTATGTTAGATCTATATTCTAGTATCATTTTATT CTGGTAAAATTTGATATAAGACATC