Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0587000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:21681989:21685007:1 gene:Os03g0587000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:inositol monophosphatase 1 description:Similar to L-galactose-1-phosphate phosphatase. (Os03t0587000-01)
Sequence

ATGGCGGAGGAGCAGTTCCTCGCCGTCGCGGTGGACGCCGCCAAGAACGCCGGCGAGATC
ATCCGCAAGGGCTTCTACCAGACCAAGAACGTGGAGCACAAGGGCCAGGTGGATTTGGTG
ACGGAGACGGACAAGGCCTGCGAGGACCTCATCTTCAACCACCTCCGGAAGCACTACCCG
GACCACAAGTTCATCGGCGAGGAGACGTCCGCGGCGCTCGGCGCCACCGCGGACCTCACC
GACGACCCGACCTGGATCGTCGACCCCCTCGATGGCACCACCAATTTCGTCCATGGCTTC
CCTTTTGTTTGCGTCTCGATCGGTCTCACCGTCGGGAAAATTCCTACTGTTGGAGTTGTG
TACAACCCCATCATGAATGAGCTTTTCACAGCTGTTCGTGGAAAAGGTGCCTTCCTCAAT
GGTTCTCCAATCAAAACTTCATCTCAAAACGAGCTGGTGAAGGCTCTTCTGGTAACAGAG
GTTGGAACCAAAAGAGATAAGGCCACTCTGGATGATACAACAAACAGAATCAACAAGTTA
CTATTCAAGATTAGATCTATACGGATGTGTGGCTCGTTGGCCTTGAACATGTGTGGAGTT
GCCTGTGGTAGGCTTGATTTGTGTTATGAGATTGGATTTGGTGGCCCCTGGGATGTGGCC
GCTGGAGCTCTGATTCTTCGGGAAGCTGGTGGTTTTGTTTTTGATCCGAGTGGTGGGGAG
TTTGATCTGATGGCACGAAGAATGGCAGGATCAAACAGCTATCTGAAGGATCAATTCATC
AAAGAATTGGGAGATACAAGTTGA

Peptide Sequence

PEP ID

Os03t0587000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:21681989:21685007:1 gene:Os03g0587000 transcript:Os03t0587000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:inositol monophosphatase 1 description:Similar to L-galactose-1-phosphate phosphatase. (Os03t0587000-01)
Sequence

MAEEQFLAVAVDAAKNAGEIIRKGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLRKHYP
DHKFIGEETSAALGATADLTDDPTWIVDPLDGTTNFVHGFPFVCVSIGLTVGKIPTVGVV
YNPIMNELFTAVRGKGAFLNGSPIKTSSQNELVKALLVTEVGTKRDKATLDDTTNRINKL
LFKIRSIRMCGSLALNMCGVACGRLDLCYEIGFGGPWDVAAGALILREAGGFVFDPSGGE
FDLMARRMAGSNSYLKDQFIKELGDTS

Transcript Sequence

Transcript ID

Os03t0587000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:21681989:21685007:1 gene:Os03g0587000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:inositol monophosphatase 1 description:Similar to L-galactose-1-phosphate phosphatase. (Os03t0587000-01)
Sequence

GTTGGCGAAGGACCAACCAATTTCCTCTCTCTAATCGCCGCGGCGGGGGATAGATTGGGA
GTGAGCGCGTATGGCGGAGGAGCAGTTCCTCGCCGTCGCGGTGGACGCCGCCAAGAACGC
CGGCGAGATCATCCGCAAGGGCTTCTACCAGACCAAGAACGTGGAGCACAAGGGCCAGGT
GGATTTGGTGACGGAGACGGACAAGGCCTGCGAGGACCTCATCTTCAACCACCTCCGGAA
GCACTACCCGGACCACAAGTTCATCGGCGAGGAGACGTCCGCGGCGCTCGGCGCCACCGC
GGACCTCACCGACGACCCGACCTGGATCGTCGACCCCCTCGATGGCACCACCAATTTCGT
CCATGGCTTCCCTTTTGTTTGCGTCTCGATCGGTCTCACCGTCGGGAAAATTCCTACTGT
TGGAGTTGTGTACAACCCCATCATGAATGAGCTTTTCACAGCTGTTCGTGGAAAAGGTGC
CTTCCTCAATGGTTCTCCAATCAAAACTTCATCTCAAAACGAGCTGGTGAAGGCTCTTCT
GGTAACAGAGGTTGGAACCAAAAGAGATAAGGCCACTCTGGATGATACAACAAACAGAAT
CAACAAGTTACTATTCAAGATTAGATCTATACGGATGTGTGGCTCGTTGGCCTTGAACAT
GTGTGGAGTTGCCTGTGGTAGGCTTGATTTGTGTTATGAGATTGGATTTGGTGGCCCCTG
GGATGTGGCCGCTGGAGCTCTGATTCTTCGGGAAGCTGGTGGTTTTGTTTTTGATCCGAG
TGGTGGGGAGTTTGATCTGATGGCACGAAGAATGGCAGGATCAAACAGCTATCTGAAGGA
TCAATTCATCAAAGAATTGGGAGATACAAGTTGAACAACATATTCCTCAACATGAAGTAG
AATAAGAATATAAGATCGCCCTGCCAATTTTATTGGGGCAAATTTTCTTTCTAGTGGTTC
TGCATAAACAGCATGCCTGTTGCGGAAAAGTTTTGGACGCAGTATGGCATTGTATTGTTT
GAAACTTTTTTTTTTTTGGCACTACTATCCGGTGTTACTTCGGAAACTAGTGCATCGAAG
ATTCGAAGTAGCTTAATCAGAATTTTGAACCGAATGTTCAGATGGATTGTGCAATGTGCA
TTTCCCCC