Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0586300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:21622958:21628739:-1 gene:Os03g0586300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os03t0586300-01)
Sequence	ATGGCGCCGTGGTGCCCCGCCGACTCGACCAAGCCGGTCTTCGTCGGGATCTACGGCGCC GTCATCGGCGGGTTCGCCGTCTCCGCGCTCTTCTTCCTCCTCTCCTCCTTCTCCTCGCTC GCCGCGCCCCCGCTCCCCATCCCTCCCGCGTCCGCCGCCGCCGCCAACCTCTCGGGCGCA GTCTCCGGTGTGGCGCAGCCGGAGACCATGTACAATCGGCCCATCTGGAAGCCCCCGCCG CGGAGGGAGCGGATGCCCGCGCCGCGCGCGTTCCGCCTCACCCGCGAGATGGTGGGCGCC CGCGCCCGCGGCGGCGCCATTGTCGTCACCTTCGGCAACCACGCCTTCCTCGACTTCATC CTCACCTGGGTGCGCCACCTCACGGACCTCGGCGTCGACAGCCTCCTCGTCGGCGCCATG GACACCAAGCTGCTCCGGGAGCTCTACCTCAGGGGCGTCCCCGTCTTCGACATGGGCAGC AGGATGGCCACCGAGGACGCCGTCTGGGGCTCGCCCACCTTCCACAAGATGGGCAGGGAG AAGGTGCTGCTCATCAACGCGCTCCTGCCCTTCGGCTACGAGCTGCTCATGTGCGACACG GACATGGTGTGGCTCAAGAACCCGCTGCCCTACCTCGCCCGCTACCCTGACGCGGATCTC CTCACGTCCAGCGACCAGGTCATTCCCACGGTCACCGATGACAGCCTGGAGAACTGGAGG GAAGTTACTGGTGCATACAATATCGGTATTTTCCATTGGCGACCCACTGAACCAGCTAAG AGGCTGGCAAAAGATTGGAAAGACTTACTCTTATCTGATGATACGTTGTGGGACCAGAAT GCTTTTAATGACCTTATACACAAAAAATTTGGATACCCGGTTGTTGGAGAAGATGAACTT GTATATTCTTATGATGGGAAACTGAAGCTTGGAGTCCTACCAGCAAGTATATTCTGTAGT GGTCATACATATTTTGTGCAGTTGCCAGGGCATGTATCAGCAGCTTCGGCTAGAACCATA TGCTGTGCATACTACTTTCCAGTATGCAGGTACTGTGGGAAAGCGTCATAG

Peptide Sequence

PEP ID	Os03t0586300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:21622958:21628739:-1 gene:Os03g0586300 transcript:Os03t0586300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os03t0586300-01)
Sequence	MAPWCPADSTKPVFVGIYGAVIGGFAVSALFFLLSSFSSLAAPPLPIPPASAAAANLSGA VSGVAQPETMYNRPIWKPPPRRERMPAPRAFRLTREMVGARARGGAIVVTFGNHAFLDFI LTWVRHLTDLGVDSLLVGAMDTKLLRELYLRGVPVFDMGSRMATEDAVWGSPTFHKMGRE KVLLINALLPFGYELLMCDTDMVWLKNPLPYLARYPDADLLTSSDQVIPTVTDDSLENWR EVTGAYNIGIFHWRPTEPAKRLAKDWKDLLLSDDTLWDQNAFNDLIHKKFGYPVVGEDEL VYSYDGKLKLGVLPASIFCSGHTYFVQLPGHVSAASARTICCAYYFPVCRYCGKAS

Transcript Sequence

Transcript ID	Os03t0586300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:21622958:21628739:-1 gene:Os03g0586300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os03t0586300-01)
Sequence	AATGGCAGCGGTGAGCCGCTGACCTTGCCTCTCCGGCGACCACGATCCGCCGCCGCCGGC CGGCGAGATGGCGCCGTGGTGCCCCGCCGACTCGACCAAGCCGGTCTTCGTCGGGATCTA CGGCGCCGTCATCGGCGGGTTCGCCGTCTCCGCGCTCTTCTTCCTCCTCTCCTCCTTCTC CTCGCTCGCCGCGCCCCCGCTCCCCATCCCTCCCGCGTCCGCCGCCGCCGCCAACCTCTC GGGCGCAGTCTCCGGTGTGGCGCAGCCGGAGACCATGTACAATCGGCCCATCTGGAAGCC CCCGCCGCGGAGGGAGCGGATGCCCGCGCCGCGCGCGTTCCGCCTCACCCGCGAGATGGT GGGCGCCCGCGCCCGCGGCGGCGCCATTGTCGTCACCTTCGGCAACCACGCCTTCCTCGA CTTCATCCTCACCTGGGTGCGCCACCTCACGGACCTCGGCGTCGACAGCCTCCTCGTCGG CGCCATGGACACCAAGCTGCTCCGGGAGCTCTACCTCAGGGGCGTCCCCGTCTTCGACAT GGGCAGCAGGATGGCCACCGAGGACGCCGTCTGGGGCTCGCCCACCTTCCACAAGATGGG CAGGGAGAAGGTGCTGCTCATCAACGCGCTCCTGCCCTTCGGCTACGAGCTGCTCATGTG CGACACGGACATGGTGTGGCTCAAGAACCCGCTGCCCTACCTCGCCCGCTACCCTGACGC GGATCTCCTCACGTCCAGCGACCAGGTCATTCCCACGGTCACCGATGACAGCCTGGAGAA CTGGAGGGAAGTTACTGGTGCATACAATATCGGTATTTTCCATTGGCGACCCACTGAACC AGCTAAGAGGCTGGCAAAAGATTGGAAAGACTTACTCTTATCTGATGATACGTTGTGGGA CCAGAATGCTTTTAATGACCTTATACACAAAAAATTTGGATACCCGGTTGTTGGAGAAGA TGAACTTGTATATTCTTATGATGGGAAACTGAAGCTTGGAGTCCTACCAGCAAGTATATT CTGTAGTGGTCATACATATTTTGTGCAGTTGCCAGGGCATGTATCAGCAGCTTCGGCTAG AACCATATGCTGTGCATACTACTTTCCAGTATGCAGGTACTGTGGGAAAGCGTCATAGAT TGCGTGAAGCAATGCTTTTCTTTGATCAGCCATCATACTATGACTCACCAGGAGGTTTCC TATCATTTAGACCCAACATTCCTAAAAGCTTGCTGTTAGATGGCGCTCATACTGTTAAAT CTCATTTTGCATTGGTCAATTACCAGTTGAAGCAAATAAGAACTGCACTCGCTATTGCTT CCCTATTAAAGAGGACCCTGGCTTGATAGGATGTGGTTTGGACATCCTGGAGTTTTGGAA GGAACAATGACCAGACAACCTTTCCTCTGTCCAATGGATCATGTTTTTGAGGTACATGTT ATGCTAAAGGACTTACCTAAGGAGGAGTTTGGCCCACACATTGATTTTAGAGAATACTCG TTTCTTGAGAATCCATCATTGCCTAAACAGGTCAAAGAATCATTTCTTGAGGTTGAGCTC TGCAATGAGCATAGCACCAGATGCTCAACAACTAATAGAACCAATAAAGGCGCGCCTGTT CTCTTACCAAGGAATAGCACAGAACAAACGCTTTTGGATATATTCAAACCATATAAGGAT ATCAAAATCTTACAGTTCTCATCTATGGTTAACGCCTTCGGAGGTTTTTCTGATGCAGCT GTGGACACGAAATTTCGGAATCGAGTAAAGAGATATGTGGGCCTATGGTGCTGTGTGCAG CTCCGTGAAATAGGGCACATATATTATGACATGTACTGGGATGAGAAACCAGGCTGGAAG CCCCTTCCTCCACAGACCAAGGTGGAGGACCATCCACCTTGGTTGGAGGTACAGGAATGA GGCTAACTACAATCACGGATGTTATTTTTTGATTCAAAGGCAAGATAGATTCCTTACTAC AGATTAACTCCTATTATCATAGCAGTCACTACCTGTTGGAAATCCAATTGATTCTTCTTG ACTGCTTACTGTGAAGGAAATAGAAATCAAATGGCAATCAGTTTTGTAGCTCTGATCTTT GATAGGCTGATTCACTTATGGTCGATCAGTGATCCTTTGCTCTGTTCTTACTTCACACAG ATCTCTGATAAACCGTGGTCCATTCATCTTGTGAAGATAATGTTGTAGATAATGACTTTG ACTCAGAACTGTTGCGCTATGTTCATAGTTCATACAGACATTAGCTTCAAAGGAGAAGAT AGCTTTTTTATGCAAAATGCCTGAATTGATTGTTTGACAGTTATCTGGCTGGTACAGAAA AGGAGTAAACATGCATC