Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0583900-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:21502236:21515440:-1 gene:Os03g0583900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DICER-LIKE 2A description:DEAD-like helicase, N-terminal domain containing protein. (Os03t0583900-01);Similar to Endoribonuclease Dicer homolog 2a. (Os03t0583900-02);Similar to Endoribonuclease Dicer homolog 2a. (Os03t0583900-03);Similar to Endoribonuclease Dicer homolog 2a. (Os03t0583900-04)
Sequence	ATGGGTGGCCCCCTCACCGCCGCCGGAGGTCGAGGAGATGGGGGCGCCAAGGCGGTGGAA CCGCTCCGGCCTCCGCCGCCGCCCGACCCGAAGACAATGGCCAGATGGTACCAGCTGGAG GCGCTGGAGCGGGCGGTGCGGGGGAACACCCTGGCGTTCCTGGAGACCGGGAGCGGGAAG ACGCTCATCGCGGTGATGCTGCTCCGGGCGTACGCGCACCGCGTGCGGAGGCCGGACTCG CGCCGCTTCGCCGTCTTCCTCGTCCCCACCGTCGTCCTCGTGGGCCAGCAGGCGCGCGTC GTCGAGCAGCACACCGACCTCGTCGTCAAGCAGTTCTGCGGCGAGATGGGGGTCGACTTC TGGGACGCCGCCACCTGGCGATCCCAACTGGAGGACGGCGAGGTGCTCGTCATGACGCCG CAGATCCTGCTCGACAACCTCCGCCACAGCTTCTTCCGCCTCCAGGACATCGCGCTGCTC ATCTTCGACGAGTGTCACCACGCCAGGGGCAATACGCCGTACGCCTGCATTTTCAAGGAA TTTTATCACCCCCAGTTGAATTCTAGTGCGTCAGACCCTCTGCCAAGGATATTTGGGATG TCTGCTTCGCTCATTTATTCAAAAGATTTGAATCCGCACAATTATTCAAAGCAAATTTCT GAGATTGAGAATCTCATGAATTCCAAGGTGTACACTGTTGATAGTGAATCAGCTTTGTCG GAGTACATACCATTTGCTTCTACAAAAATAGTGGACTTTGACGATTCCAACATTTCATCT GAGCTGCATGCCAATATTCTCAGTTGTTTGAATAGATTGAATAAAAAGCATATAGAAGCT CTGGACAGAAAACTACATGGTTCATCTCTGGAAAACGCTAAGCAAAGGATATCAAAATTG CATCATACATTTGTATATTGTTTATATAATCTAGGAGTATGGCTGGCAGCAAAGGCTGCT GAGGTACAATCATACGAGGAAAACAGCCTATCCTTCTGGGGTGAAACATTGGATAAAAAT GTTGAGGGCTTCATTAGAAACTACAGCGAAGAAGTACATAGAGAACTTTCATGTTTCTTG AAGAATGGTCATATTGGTGAAAAATTTCCAGCTGATTCTCAAGATGGGATATTGACACCC AAAGTTCATTGCCTTATTCGAACTCTTCTGCAGTACAGGCATATGCAAGACTTAAGATGC ATTGTGTTTGTTGAGAGAGTTATCACAAGCATAGTATTAGAGCACCTACTTTCATCTATT CATCAAATGTCTGGGTGGAATGTTAAGCACATGGCAGGAAGCCGTCCTGGTTTGCTATCT CAGAGCAGGAAAAATCATACAGAAATTGTTGAATCTTTTCGAAAAGGAAAGGTACATATA ATTATTGCCACACAAATTTTGGAGGAGGGTTTAGATGTGCCAAGTTGTAACTTGGTAATT CGCTTTGATCCATCAGCAACAGTATGCAGCTTTATACAGTCCCGTGGTCGAGCTAGGATG GAAAACTCTGACTATCTTTTACTTGTCGGAAGGGGGGATGTGGAAGCTCAAACTAATGCA GAGAAGTTTCTCGCAAGTGGGCAAATAATGCGGGAGGAATCTCTGAGATTGGGATCAATT TCTTGTCAACCACTTGAGAACACCTTGTGCGAGGATACCTATTACCGTGTCGAGTCAACT AGAGCAATTGTGACACTAAACTCCAGCGTTCCATTAATTCATTTTTTCTGCTCAAAGCTT CCATCGGATGAATATTTTAATCCTCTACCAAGATTCGATATAGACAAGGCATCTGGCACA TGCACTCTGCATCTTCCTAAGAGCAGTCCTGTGCAGACAGTTAATGTAGAAGGAGAAGGT TCTATTCTCAAGGAGACAGTTTGTCTTAAGGCCTGCCAAGAACTACATGCCATTGGTGCA CTCACAGATTCTCTTTTACCAGAATTAGATGTTCCATGTGATGAAGAACCTGACATCGTT GTTGAGAACAAAATTGAGCAGCCTTCTTACTTTCCAGAAGAATTTGTGGATAATTGGCGC TCCTTTTCTCGTCTTGGCATATATTATTGCTATAAGATCTCATTGGAAGGATGTCCCAAA ACAGCTTCTCCAACTGACATACTGTTAGCTTTGAAGTGTGATTTGGGATCTGACTTTACT TCTAGCTCATTTAAATTGCCAGGTGGGCAAGACAATGCTAGTGTTACCATGAAATATGTT GGCATCATCCATCTCAATCAAGAACAGGTAATTATTGCTAGAAGATTTCAGACAACTATT CTTTCGTTTCTTATTGGTGATGACCATTTGGAGGTTAGCAATGGTATTAAATACTTCCAT GAGATGCAAGTGCCTATTGGAGTAGTCTATCTACTTCTGCCTTTAGTTTCTGGCAGAATT GATTGGTGCAGTATGAAGTTCTCATCCTCACCAATATATGAAGCTAACAACAAACATATG ACACATTGCCATTCTTGTAAAGATATTGATTTACTGCAGACAAAAGATGGTCCTTTCTGC AGGTGCATCCTTAAAAATTCCATTGTGTGTACCCCTCATAATAACATCTTTTATGTTATT AGTGGGTTTCTTGACTTAGATGCAAATTCCTGTTTGCCTCAACATGATGGGACTGTTGTT ACCTACAAAGATTATTTTAAGACTAGGCATGGTCTTACTTTGACTTTTGAAAATCAGCCG CTCTTGGCTGGCAGTAAACATGTGAAAGTGCGGAACTTCCTCCACAACTGCTACTCTAAA AAAGAAAAAGAACCTGGTGATAGATATAGTGTTGAGTTGCCACCTGAACTCTGCAGAATT ATCATGTCACCAGTGTCCGCCAATAATTTGCACATCTTCTCATATGTTCCTTCCATAATG TTCCGCATCCAGTGCATGCTTCTTTCTGTGAAATTAAAGGTCCAATTAGGCCCAACAGTG CAGCAGTTTGACGTACCGGTTTTGAAGATCCTGGAAGCATTAACAACAAAGAAATGCCAA GAAGAATTTTCACAGGAATCATTAGAAACACTTGGGGATTCTTTCCTCAAATATGTTACA ACTCGGCACCTTTTTAGTGAATACAGGCTTCAACATGAAGGCATATTAACAAAAATGAAG AAAAACTTGATCTCCAATGCAGCTCTGTGCCAGCTGGCCTGCAGCAGTAATCTTGTGGGT TACATTCATGCTGAGGAGTTTAATCCAAGAGATTGGATCATCCCTTGCTTGGACTATGAT GAGCGTGATAACAAAAAAATTTCCTTTCTGGCACCCAATGGTATGTACAGCCAAAGGAAA ATGTCTATTAAAAGTAAGAGGATTGCGGATTCAGTTGAGGCCTTAATTGGGGCTTACCTC AGTACTGCTGGGGAAAAGGCAGCATTTCTTTTGATGAAATCATTAGGGATGAATATAGAA TTTCACACTGAAATTCCAGTTGAAAGGAAAATTTCAATGAAAGCTGAAGAGTTCATTAAT GTGAGGAGCTTAGAGGGAATGCTTGGTTACAAGTTCAATGATTCTTTATTATTGCTCGAA GCATTGACACATGGCTCATATCAGACTTCTGGCCCTACTTCATGCTATCAGAGGCTCGAG TTTCTTGGAGATGCTATTTTGGATCATCTTTTCACTGAATATTACTACAGC

Peptide Sequence

PEP ID	Os03t0583900-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:21502236:21515440:-1 gene:Os03g0583900 transcript:Os03t0583900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DICER-LIKE 2A description:DEAD-like helicase, N-terminal domain containing protein. (Os03t0583900-01);Similar to Endoribonuclease Dicer homolog 2a. (Os03t0583900-02);Similar to Endoribonuclease Dicer homolog 2a. (Os03t0583900-03);Similar to Endoribonuclease Dicer homolog 2a. (Os03t0583900-04)
Sequence	MGGPLTAAGGRGDGGAKAVEPLRPPPPPDPKTMARWYQLEALERAVRGNTLAFLETGSGK TLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVLVGQQARVVEQHTDLVVKQFCGEMGVDF WDAATWRSQLEDGEVLVMTPQILLDNLRHSFFRLQDIALLIFDECHHARGNTPYACIFKE FYHPQLNSSASDPLPRIFGMSASLIYSKDLNPHNYSKQISEIENLMNSKVYTVDSESALS EYIPFASTKIVDFDDSNISSELHANILSCLNRLNKKHIEALDRKLHGSSLENAKQRISKL HHTFVYCLYNLGVWLAAKAAEVQSYEENSLSFWGETLDKNVEGFIRNYSEEVHRELSCFL KNGHIGEKFPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSI HQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVI RFDPSATVCSFIQSRGRARMENSDYLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSI SCQPLENTLCEDTYYRVESTRAIVTLNSSVPLIHFFCSKLPSDEYFNPLPRFDIDKASGT CTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIV VENKIEQPSYFPEEFVDNWRSFSRLGIYYCYKISLEGCPKTASPTDILLALKCDLGSDFT SSSFKLPGGQDNASVTMKYVGIIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFH EMQVPIGVVYLLLPLVSGRIDWCSMKFSSSPIYEANNKHMTHCHSCKDIDLLQTKDGPFC RCILKNSIVCTPHNNIFYVISGFLDLDANSCLPQHDGTVVTYKDYFKTRHGLTLTFENQP LLAGSKHVKVRNFLHNCYSKKEKEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIM FRIQCMLLSVKLKVQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVT TRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYD ERDNKKISFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIE FHTEIPVERKISMKAEEFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLE FLGDAILDHLFTEYYYS

Transcript Sequence

Transcript ID	Os03t0583900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:21502236:21515440:-1 gene:Os03g0583900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DICER-LIKE 2A description:DEAD-like helicase, N-terminal domain containing protein. (Os03t0583900-01);Similar to Endoribonuclease Dicer homolog 2a. (Os03t0583900-02);Similar to Endoribonuclease Dicer homolog 2a. (Os03t0583900-03);Similar to Endoribonuclease Dicer homolog 2a. (Os03t0583900-04)
Sequence	CGCGCGCGCGACTCGTAGGAATTCGGTTCGGATTCGTGCGTGCACCGAAGGAGGCGGAGG CGGAGGCGGCCCAAGCGTCGGCGCCACCTCACTCTCCCACCCCCATCCCGCCGCCTCCCC CGATTCCTCCCCCAAACCCCTCCTCCTCCTCCGCCGCCGCCGCCGTCGCCATGGGTGGCC CCCTCACCGCCGCCGGAGGTCGAGGAGATGGGGGCGCCAAGGCGGTGGAACCGCTCCGGC CTCCGCCGCCGCCCGACCCGAAGACAATGGCCAGATGGTACCAGCTGGAGGCGCTGGAGC GGGCGGTGCGGGGGAACACCCTGGCGTTCCTGGAGACCGGGAGCGGGAAGACGCTCATCG CGGTGATGCTGCTCCGGGCGTACGCGCACCGCGTGCGGAGGCCGGACTCGCGCCGCTTCG CCGTCTTCCTCGTCCCCACCGTCGTCCTCGTGGGCCAGCAGGCGCGCGTCGTCGAGCAGC ACACCGACCTCGTCGTCAAGCAGTTCTGCGGCGAGATGGGGGTCGACTTCTGGGACGCCG CCACCTGGCGATCCCAACTGGAGGACGGCGAGGTGCTCGTCATGACGCCGCAGATCCTGC TCGACAACCTCCGCCACAGCTTCTTCCGCCTCCAGGACATCGCGCTGCTCATCTTCGACG AGTGTCACCACGCCAGGGGCAATACGCCGTACGCCTGCATTTTCAAGGAATTTTATCACC CCCAGTTGAATTCTAGTGCGTCAGACCCTCTGCCAAGGATATTTGGGATGTCTGCTTCGC TCATTTATTCAAAAGATTTGAATCCGCACAATTATTCAAAGCAAATTTCTGAGATTGAGA ATCTCATGAATTCCAAGGTGTACACTGTTGATAGTGAATCAGCTTTGTCGGAGTACATAC CATTTGCTTCTACAAAAATAGTGGACTTTGACGATTCCAACATTTCATCTGAGCTGCATG CCAATATTCTCAGTTGTTTGAATAGATTGAATAAAAAGCATATAGAAGCTCTGGACAGAA AACTACATGGTTCATCTCTGGAAAACGCTAAGCAAAGGATATCAAAATTGCATCATACAT TTGTATATTGTTTATATAATCTAGGAGTATGGCTGGCAGCAAAGGCTGCTGAGGTACAAT CATACGAGGAAAACAGCCTATCCTTCTGGGGTGAAACATTGGATAAAAATGTTGAGGGCT TCATTAGAAACTACAGCGAAGAAGTACATAGAGAACTTTCATGTTTCTTGAAGAATGGTC ATATTGGTGAAAAATTTCCAGCTGATTCTCAAGATGGGATATTGACACCCAAAGTTCATT GCCTTATTCGAACTCTTCTGCAGTACAGGCATATGCAAGACTTAAGATGCATTGTGTTTG TTGAGAGAGTTATCACAAGCATAGTATTAGAGCACCTACTTTCATCTATTCATCAAATGT CTGGGTGGAATGTTAAGCACATGGCAGGAAGCCGTCCTGGTTTGCTATCTCAGAGCAGGA AAAATCATACAGAAATTGTTGAATCTTTTCGAAAAGGAAAGGTACATATAATTATTGCCA CACAAATTTTGGAGGAGGGTTTAGATGTGCCAAGTTGTAACTTGGTAATTCGCTTTGATC CATCAGCAACAGTATGCAGCTTTATACAGTCCCGTGGTCGAGCTAGGATGGAAAACTCTG ACTATCTTTTACTTGTCGGAAGGGGGGATGTGGAAGCTCAAACTAATGCAGAGAAGTTTC TCGCAAGTGGGCAAATAATGCGGGAGGAATCTCTGAGATTGGGATCAATTTCTTGTCAAC CACTTGAGAACACCTTGTGCGAGGATACCTATTACCGTGTCGAGTCAACTAGAGCAATTG TGACACTAAACTCCAGCGTTCCATTAATTCATTTTTTCTGCTCAAAGCTTCCATCGGATG AATATTTTAATCCTCTACCAAGATTCGATATAGACAAGGCATCTGGCACATGCACTCTGC ATCTTCCTAAGAGCAGTCCTGTGCAGACAGTTAATGTAGAAGGAGAAGGTTCTATTCTCA AGGAGACAGTTTGTCTTAAGGCCTGCCAAGAACTACATGCCATTGGTGCACTCACAGATT CTCTTTTACCAGAATTAGATGTTCCATGTGATGAAGAACCTGACATCGTTGTTGAGAACA AAATTGAGCAGCCTTCTTACTTTCCAGAAGAATTTGTGGATAATTGGCGCTCCTTTTCTC GTCTTGGCATATATTATTGCTATAAGATCTCATTGGAAGGATGTCCCAAAACAGCTTCTC CAACTGACATACTGTTAGCTTTGAAGTGTGATTTGGGATCTGACTTTACTTCTAGCTCAT TTAAATTGCCAGGTGGGCAAGACAATGCTAGTGTTACCATGAAATATGTTGGCATCATCC ATCTCAATCAAGAACAGGTAATTATTGCTAGAAGATTTCAGACAACTATTCTTTCGTTTC TTATTGGTGATGACCATTTGGAGGTTAGCAATGGTATTAAATACTTCCATGAGATGCAAG TGCCTATTGGAGTAGTCTATCTACTTCTGCCTTTAGTTTCTGGCAGAATTGATTGGTGCA GTATGAAGTTCTCATCCTCACCAATATATGAAGCTAACAACAAACATATGACACATTGCC ATTCTTGTAAAGATATTGATTTACTGCAGACAAAAGATGGTCCTTTCTGCAGGTGCATCC TTAAAAATTCCATTGTGTGTACCCCTCATAATAACATCTTTTATGTTATTAGTGGGTTTC TTGACTTAGATGCAAATTCCTGTTTGCCTCAACATGATGGGACTGTTGTTACCTACAAAG ATTATTTTAAGACTAGGCATGGTCTTACTTTGACTTTTGAAAATCAGCCGCTCTTGGCTG GCAGTAAACATGTGAAAGTGCGGAACTTCCTCCACAACTGCTACTCTAAAAAAGAAAAAG AACCTGGTGATAGATATAGTGTTGAGTTGCCACCTGAACTCTGCAGAATTATCATGTCAC CAGTGTCCGCCAATAATTTGCACATCTTCTCATATGTTCCTTCCATAATGTTCCGCATCC AGTGCATGCTTCTTTCTGTGAAATTAAAGGTCCAATTAGGCCCAACAGTGCAGCAGTTTG ACGTACCGGTTTTGAAGATCCTGGAAGCATTAACAACAAAGAAATGCCAAGAAGAATTTT CACAGGAATCATTAGAAACACTTGGGGATTCTTTCCTCAAATATGTTACAACTCGGCACC TTTTTAGTGAATACAGGCTTCAACATGAAGGCATATTAACAAAAATGAAGAAAAACTTGA TCTCCAATGCAGCTCTGTGCCAGCTGGCCTGCAGCAGTAATCTTGTGGGTTACATTCATG CTGAGGAGTTTAATCCAAGAGATTGGATCATCCCTTGCTTGGACTATGATGAGCGTGATA ACAAAAAAATTTCCTTTCTGGCACCCAATGGTATGTACAGCCAAAGGAAAATGTCTATTA AAAGTAAGAGGATTGCGGATTCAGTTGAGGCCTTAATTGGGGCTTACCTCAGTACTGCTG GGGAAAAGGCAGCATTTCTTTTGATGAAATCATTAGGGATGAATATAGAATTTCACACTG AAATTCCAGTTGAAAGGAAAATTTCAATGAAAGCTGAAGAGTTCATTAATGTGAGGAGCT TAGAGGGAATGCTTGGTTACAAGTTCAATGATTCTTTATTATTGCTCGAAGCATTGACAC ATGGCTCATATCAGACTTCTGGCCCTACTTCATGCTATCAGAGGCTCGAGTTTCTTGGAG ATGCTATTTTGGATCATCTTTTCACTGAATATTACTACAGC