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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0583700-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:21490216:21493292:1 gene:Os03g0583700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome maturation factor UMP1 family protein. (Os03t0583700-00)
Sequence

ATGGCGAGCGGCAGCATCGTGAAGAAGGAGGTCGGCGAGAACCACGACGTGCTCCTCTTC
GGCGTCAACAACAGCGTCAAGGGCGACCTCGCGCCGCAGCACCCGATCCAGGCCACCGTC
CACAAGGAGGCCAAGTTCTGGGCGGATAAGAAGAGGTTCGGGGCGGAAGCCATCTACGGA
TCCGCTTTCAACATCCGCAAGGATCTCGATGCCCAAATCCTCTCCAAGTTCCAAAGGCCC
CCTGGTGCATTGCCATCATCTATGCTAGGATACGAGGCGCTGACTGGTTCCTTGGATGAT
TTCGGGTTTGAAGATTATCTCAACTTGCCCCAAGATTCTGACAGCTTCCATGCTCCAGAC
ATGCACCACGGAATGGAGGTTCGCCTTGGTTTGTCAAAGGGACCGATTTGCCCTAGTTTC
AATTGA

Peptide Sequence

PEP ID

Os03t0583700-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:21490216:21493292:1 gene:Os03g0583700 transcript:Os03t0583700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome maturation factor UMP1 family protein. (Os03t0583700-00)
Sequence

MASGSIVKKEVGENHDVLLFGVNNSVKGDLAPQHPIQATVHKEAKFWADKKRFGAEAIYG
SAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNLPQDSDSFHAPD
MHHGMEVRLGLSKGPICPSFN

Transcript Sequence

Transcript ID

Os03t0583700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:21490216:21493292:1 gene:Os03g0583700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome maturation factor UMP1 family protein. (Os03t0583700-00)
Sequence

CTTCTCCCCAAAGAAGCACAAGAAGAGGAAGAGCTTGGCGACGATGGCGAGCGGCAGCAT
CGTGAAGAAGGAGGTCGGCGAGAACCACGACGTGCTCCTCTTCGGCGTCAACAACAGCGT
CAAGGGCGACCTCGCGCCGCAGCACCCGATCCAGGCCACCGTCCACAAGGAGGCCAAGTT
CTGGGCGGATAAGAAGAGGTTCGGGGCGGAAGCCATCTACGGATCCGCTTTCAACATCCG
CAAGGATCTCGATGCCCAAATCCTCTCCAAGTTCCAAAGGCCCCCTGGTGCATTGCCATC
ATCTATGCTAGGATACGAGGCGCTGACTGGTTCCTTGGATGATTTCGGGTTTGAAGATTA
TCTCAACTTGCCCCAAGATTCTGACAGCTTCCATGCTCCAGACATGCACCACGGAATGGA
GGTTCGCCTTGGTTTGTCAAAGGGACCGATTTGCCCTAGTTTCAATTGATTTCACAAAAT
GTATTTCTCGTCTTGCACTGTTCTCCTCATTCAATATCTATGTCGCTCTTTAGACTGAGA
TTTCGATG