Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0580200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:21275422:21276198:-1 gene:Os03g0580200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, GDSL domain containing protein. (Os03t0580200-01)
Sequence

TGGTGTTCGATCGATTGTGTTCAGAGGCTGTACGACCTCGGGGCGCGCAGGGTGCTGTTC
CTGGGGACGGGGCCGGTGGGCTGCTGCCCGTCGCTGCGGGAGCTGAGCGCCGACAGGGGC
TGCAGCGGCGAGGCCAACGACGCGTCGGCGCGGTACAACGCGGCGGCGGCGTCGCTGCTG
CGCGGGATGGCCGAGCGGCGCGCGGGCCTCCGCTACGCGGTGTTCGACTCCAGCGCGGCG
CTGCTCCGGTACATCGAGCGGCCGGCGGCGTACGGGTTCGCGGAGGCGCGGGCGGCGTGC
TGCGGCCTCGGGGACATGAACGCCAAGATCGGCTGCACCCCGGTCAGCTTCTACTGCGCC
AACCGGACGGGCTACGTGTTCTGGGACTTCTACCACCCGACCGAGGCCACCGCGCGGATG
CTCACCGCCGTCGCGTTCGACGGCTCGCCGCCGCTCGTCTTCCCCGTGAACATTAGGCAG
CTCGCTGCTATGTAG

Peptide Sequence

PEP ID

Os03t0580200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:21275422:21276198:-1 gene:Os03g0580200 transcript:Os03t0580200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, GDSL domain containing protein. (Os03t0580200-01)
Sequence

WCSIDCVQRLYDLGARRVLFLGTGPVGCCPSLRELSADRGCSGEANDASARYNAAAASLL
RGMAERRAGLRYAVFDSSAALLRYIERPAAYGFAEARAACCGLGDMNAKIGCTPVSFYCA
NRTGYVFWDFYHPTEATARMLTAVAFDGSPPLVFPVNIRQLAAM

Transcript Sequence

Transcript ID

Os03t0580200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:21275422:21276198:-1 gene:Os03g0580200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, GDSL domain containing protein. (Os03t0580200-01)
Sequence

ATCCAGTCGCTCACCGGCCAGCTACAGGTGAGGATCGAGGTCACCGATCGACAGATAATT
AAATCGATCATCAAATGATCAATTTCATGGTGTTACGTTCTAATGGTGTTCGATCGATTG
TGTTCAGAGGCTGTACGACCTCGGGGCGCGCAGGGTGCTGTTCCTGGGGACGGGGCCGGT
GGGCTGCTGCCCGTCGCTGCGGGAGCTGAGCGCCGACAGGGGCTGCAGCGGCGAGGCCAA
CGACGCGTCGGCGCGGTACAACGCGGCGGCGGCGTCGCTGCTGCGCGGGATGGCCGAGCG
GCGCGCGGGCCTCCGCTACGCGGTGTTCGACTCCAGCGCGGCGCTGCTCCGGTACATCGA
GCGGCCGGCGGCGTACGGGTTCGCGGAGGCGCGGGCGGCGTGCTGCGGCCTCGGGGACAT
GAACGCCAAGATCGGCTGCACCCCGGTCAGCTTCTACTGCGCCAACCGGACGGGCTACGT
GTTCTGGGACTTCTACCACCCGACCGAGGCCACCGCGCGGATGCTCACCGCCGTCGCGTT
CGACGGCTCGCCGCCGCTCGTCTTCCCCGTGAACATTAGGCAGCTCGCTGCTATGTAGGC
TTCATCTCATCTTCACGGTGTACTGATCGATCGAGCTGCTTGTGAGATTCCACTTTTTTC
AAGCTTCAAGTACAGCCATAGAAATATACTACTATATACCATGTAAAGTATACTAGTGTA
TTTACTTACGATTGGTACATATAGCGGTAGAATCATATAATATAGCAAATTCATAAT