Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0579300-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:21238864:21240807:-1 gene:Os03g0579300 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L19. (Os03t0579300-00)
Sequence

ATGGTTTCCCTCAAGCTGCAGAAGCGGCTCGCCTCCAGCGTGCTCAAATGCGGCAAGGGC
AAGGTCTGGCTCGACCCCAATGAGGTCAACGAGATCTCCATGGCCAACTCCCGTCAGAAC
ATCCGTAAGTTGGTCAAGGATGGGTTCATTATCAAGAAGCCCCAGAAGATTCACTCCAGG
TCCCGTGCACGGAGAGCCCATGAGGCCAAGCAGAAGGGACGTCACTCTGGCTATGGTAAG
CGTAGGGGTACCAGGGAGGCTAGGCTCCCCACCAAGATCCTGTGGATGAGGAGGATGCGT
GTGCTCAGGCGTTTGCTGCGCAAGTATCGTGAGGCCAAGAAGATTGACAAGCACATGTAT
CATGACATGTACATGAAGGTCAAGGGTAACATGTTCAAGAACAAGCGTGTTCTCATGGAA
AGTATCCACAAGTCTAAGGCTGAGAAGGCAAGAGAGAAGACACTCTCTGACCAGTTTGAG
GCTAAGCGTGCCAAGAGCAAGGCCAGTCGTGAGAGGAAGATTGCCAGGCGTGACGAGAGG
TTGGCTCAGGGCCCAAGAGAGCCAGCTGCTCCAGCAGTGCCTGCTCAAACTGCGGCGGCA
CCAAAGAAGTATAAGAAGTGA

Peptide Sequence

PEP ID

Os03t0579300-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:21238864:21240807:-1 gene:Os03g0579300 transcript:Os03t0579300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L19. (Os03t0579300-00)
Sequence

MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR
SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY
HDMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIARRDER
LAQGPREPAAPAVPAQTAAAPKKYKK

Transcript Sequence

Transcript ID

Os03t0579300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:21238864:21240807:-1 gene:Os03g0579300 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L19. (Os03t0579300-00)
Sequence

ATGGTTTCCCTCAAGCTGCAGAAGCGGCTCGCCTCCAGCGTGCTCAAATGCGGCAAGGGC
AAGGTCTGGCTCGACCCCAATGAGGTCAACGAGATCTCCATGGCCAACTCCCGTCAGAAC
ATCCGTAAGTTGGTCAAGGATGGGTTCATTATCAAGAAGCCCCAGAAGATTCACTCCAGG
TCCCGTGCACGGAGAGCCCATGAGGCCAAGCAGAAGGGACGTCACTCTGGCTATGGTAAG
CGTAGGGGTACCAGGGAGGCTAGGCTCCCCACCAAGATCCTGTGGATGAGGAGGATGCGT
GTGCTCAGGCGTTTGCTGCGCAAGTATCGTGAGGCCAAGAAGATTGACAAGCACATGTAT
CATGACATGTACATGAAGGTCAAGGGTAACATGTTCAAGAACAAGCGTGTTCTCATGGAA
AGTATCCACAAGTCTAAGGCTGAGAAGGCAAGAGAGAAGACACTCTCTGACCAGTTTGAG
GCTAAGCGTGCCAAGAGCAAGGCCAGTCGTGAGAGGAAGATTGCCAGGCGTGACGAGAGG
TTGGCTCAGGGCCCAAGAGAGCCAGCTGCTCCAGCAGTGCCTGCTCAAACTGCGGCGGCA
CCAAAGAAGTATAAGAAGTGA