Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0577100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:21102150:21106012:-1 gene:Os03g0577100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuf2 family protein. (Os03t0577100-01)
Sequence

ATGGCGTCCAACTTCTCGTTCCCTCCGCTGGCGCCGGAGCAGATAGCGGAGGCGCTGCAC
ACCTACGGCCTCGCCCCCACCGCCAACCTCCGCGCGGAGGACATCGCCAACCCGCAGCCG
GATCTCCTCCCCGCCGTCATCTCCAACTTCCTTGCCACCGTCGTCGACCCCACCGGCGCC
GACGACCTCGACGGGCAGCTAGGGTTCGACGCGCTGGCGTCGCTCGACAACCCGGAGCAC
TATAGGGAGGGCATCCGGGTCCTCCGCCTCCACAAGAGGGCCAACGCTTTCCTCGAGTCC
ATCCAGTTCCCCGGGTTCACGCTCCGCGACCTCCTCCGCCCAGACCCGCGCCGCCTCGTG
CAAGTCCTCAGCGCCCTCATCAACTTCCTCTACTACAGGGACGAGAAGCTCGCCCTCCTG
CAGCCCATCATCCATGAGTTCCCCAACTTGGATGAACGGTGCATGGAGCTCAATGCCAAG
ATTGCCGAGCATCAGAAGGCAATCGCCGATCAAGAGCTCGCCGCGCAAATGGAGGTGCCT
ATGGTTCAGCAGCTAGAGGCGGAGGTCAATTCCCTGAAGCAAAAACTTGTAGAGTACAAC
AAAAAGCAGCTGGCACTGAGGGCCAACGCCACTGCGATCAATGACAAGAAAGAGGAGACC
CACAGAAAGATTGCCAAAAGCGATTTTGAGTTGGTGAAACTAGCCCAAGAAAATTCCAAG
TTATTGTCAAAAATTGTTCAGTCCCCAGAAAAGCTTCAGAGGGCCCTTGAAGAGAAGAAA
ACAGCTCGTGCTGAGTTGAAGAATGCTGAGAAGATAGCAATGCAAAGTGTACAAGAGAAA
ACTGCCACTTTGGAGATATACAGTAAGGGTTATGAAAAATTGTCGAAGCATTCTTCTAAA
ATCCAGGCTTTACAAGAACAGTTTACTGCAACTAAAGCCCTTGAGAAAGAAGTCAAAGCG
CGCAAAGCTAAGATTAGTGATGAAAGTGTTGAAATTATGGCCCTTGACACAAAGACTATT
GAATGGGATGGGAAAGTGCATGAAATGGAGGAGCGTGTTAAAGCTAAAGAAAAAGAAAGG
GATCAAATAGTAGCAGACGAAAATCAGAAGCTGGCTGCTTTGAGGTCTGAAGTTGAATGG
AAACTCAAGTGTCTTGAACCTCGTGAAAGGAAAGTAGAGGAAACAATTGCAAAGGCTACT
AAACTATGTGCGGAGGTTGATTCAACAAGGACTGATGCTGCAGAAGAACTGCGGCTGATA
TATGCTAAATTTCAACAAATTGGACATGCCTTTACTTGCTACAAGGACAATTTTAAGACT
TTCTTGGAACAAGTTGATGAGGTGAGCAAAGAAACTTTAGAAAGTTTAGGTCGCCAAGCT
GTGGAGCCATTGGACACATCTGCAACATTGTCGATTGAGAAAGAGAACTCCTGCGGCCCC
GCTCCCTGA

Peptide Sequence

PEP ID

Os03t0577100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:21102150:21106012:-1 gene:Os03g0577100 transcript:Os03t0577100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuf2 family protein. (Os03t0577100-01)
Sequence

MASNFSFPPLAPEQIAEALHTYGLAPTANLRAEDIANPQPDLLPAVISNFLATVVDPTGA
DDLDGQLGFDALASLDNPEHYREGIRVLRLHKRANAFLESIQFPGFTLRDLLRPDPRRLV
QVLSALINFLYYRDEKLALLQPIIHEFPNLDERCMELNAKIAEHQKAIADQELAAQMEVP
MVQQLEAEVNSLKQKLVEYNKKQLALRANATAINDKKEETHRKIAKSDFELVKLAQENSK
LLSKIVQSPEKLQRALEEKKTARAELKNAEKIAMQSVQEKTATLEIYSKGYEKLSKHSSK
IQALQEQFTATKALEKEVKARKAKISDESVEIMALDTKTIEWDGKVHEMEERVKAKEKER
DQIVADENQKLAALRSEVEWKLKCLEPRERKVEETIAKATKLCAEVDSTRTDAAEELRLI
YAKFQQIGHAFTCYKDNFKTFLEQVDEVSKETLESLGRQAVEPLDTSATLSIEKENSCGP
AP

Transcript Sequence

Transcript ID

Os03t0577100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:21102150:21106012:-1 gene:Os03g0577100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuf2 family protein. (Os03t0577100-01)
Sequence

GCATTTCATTTTTTTTTTTGCCTTCGAAATTCCTCGCATTTGGTTTCCCTTGTTGATTTG
GGGGAACGGCGGCGGCGGCGAGAGAGCGGCTGCGGCGGCGACGGCGGCGGCGAAGAAGAA
GATGGCGTCCAACTTCTCGTTCCCTCCGCTGGCGCCGGAGCAGATAGCGGAGGCGCTGCA
CACCTACGGCCTCGCCCCCACCGCCAACCTCCGCGCGGAGGACATCGCCAACCCGCAGCC
GGATCTCCTCCCCGCCGTCATCTCCAACTTCCTTGCCACCGTCGTCGACCCCACCGGCGC
CGACGACCTCGACGGGCAGCTAGGGTTCGACGCGCTGGCGTCGCTCGACAACCCGGAGCA
CTATAGGGAGGGCATCCGGGTCCTCCGCCTCCACAAGAGGGCCAACGCTTTCCTCGAGTC
CATCCAGTTCCCCGGGTTCACGCTCCGCGACCTCCTCCGCCCAGACCCGCGCCGCCTCGT
GCAAGTCCTCAGCGCCCTCATCAACTTCCTCTACTACAGGGACGAGAAGCTCGCCCTCCT
GCAGCCCATCATCCATGAGTTCCCCAACTTGGATGAACGGTGCATGGAGCTCAATGCCAA
GATTGCCGAGCATCAGAAGGCAATCGCCGATCAAGAGCTCGCCGCGCAAATGGAGGTGCC
TATGGTTCAGCAGCTAGAGGCGGAGGTCAATTCCCTGAAGCAAAAACTTGTAGAGTACAA
CAAAAAGCAGCTGGCACTGAGGGCCAACGCCACTGCGATCAATGACAAGAAAGAGGAGAC
CCACAGAAAGATTGCCAAAAGCGATTTTGAGTTGGTGAAACTAGCCCAAGAAAATTCCAA
GTTATTGTCAAAAATTGTTCAGTCCCCAGAAAAGCTTCAGAGGGCCCTTGAAGAGAAGAA
AACAGCTCGTGCTGAGTTGAAGAATGCTGAGAAGATAGCAATGCAAAGTGTACAAGAGAA
AACTGCCACTTTGGAGATATACAGTAAGGGTTATGAAAAATTGTCGAAGCATTCTTCTAA
AATCCAGGCTTTACAAGAACAGTTTACTGCAACTAAAGCCCTTGAGAAAGAAGTCAAAGC
GCGCAAAGCTAAGATTAGTGATGAAAGTGTTGAAATTATGGCCCTTGACACAAAGACTAT
TGAATGGGATGGGAAAGTGCATGAAATGGAGGAGCGTGTTAAAGCTAAAGAAAAAGAAAG
GGATCAAATAGTAGCAGACGAAAATCAGAAGCTGGCTGCTTTGAGGTCTGAAGTTGAATG
GAAACTCAAGTGTCTTGAACCTCGTGAAAGGAAAGTAGAGGAAACAATTGCAAAGGCTAC
TAAACTATGTGCGGAGGTTGATTCAACAAGGACTGATGCTGCAGAAGAACTGCGGCTGAT
ATATGCTAAATTTCAACAAATTGGACATGCCTTTACTTGCTACAAGGACAATTTTAAGAC
TTTCTTGGAACAAGTTGATGAGGTGAGCAAAGAAACTTTAGAAAGTTTAGGTCGCCAAGC
TGTGGAGCCATTGGACACATCTGCAACATTGTCGATTGAGAAAGAGAACTCCTGCGGCCC
CGCTCCCTGAAAAGAGGATAGCCAATTGGAGAAGATAGCTAGGGTGTTTTGCGCCACTGT
TGTAAATTTGGAATTGAGCTGTTTTTGTTATCACTGGTGACAGTTATGCTCTGTTTGAAC
CTCATCTGACCAATTCGGTGAGAATACTTCATCATCGAATCATCTGCAGTCGTTATGTAA
AAAAATCTTGAGTCACTCTGATATGGAAATGTTGGTGTCAGGTTGCCAAGT