Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0575200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:21002797:21007629:-1 gene:Os03g0575200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 16 description:Similar to Potassium transporter 1 (OsHAK1). (Os03t0575200-01)
Sequence	ATGGCACAGCAGCAAGCCGGTGCAAGAGGCAGCAAGCTGGAGATCGTCGCCGCCCGGGGA GGAAGTGGCGGCAGCAGCAGCGCCGGCGATGCGGAGGCGCCGCCGTTGGACGTCCTGAGG CAGGACTCCCTCTACCGCGACGCGACGCGGCCGGCCCACGGCCACCATGGACAGGAGAGC TGGATGAGGACGCTGCGGCTGGGGTTCCAGTGCGTGGGAATCCTGCACGCCGACCTCGGC ACGTCGCCGCTCTACGTGTACCAGAACACATTCAAGTACGGCATCAAGCACGAGGACGAC ATCATCGGCGTCCTCTCCCTCATCATCTACAGCTTCGTGCTATTCACCATGGTCAAGATC GTCTTCATCGCCCTCCACGCCAACGACGATGGCGACGGTGGGACATTTGCTCTGTACTCG TTGATCTCGCGGTACGCCAAGGTGTGCCTGATCCCAAACCAGCAAGCCGAGGATGAGCTG GTGACGAGGTACAACGACCACGGGAAGCCGCCGGCGACGCTGCGGAGGGCGCAGTGGATG AAGAGCCAGCTCGAGAAGAAGCCCGCCAAGATTGCCGTCTTCTTCCTCACCATCTTCGCC ACCGCGCTGGCCATCAGCGACTGTGTGCTAAACCCTTCAGTCTCTGTACTTTCGGCGGTC AACGGCTTGAAACTTAGAGCACCTCATCTGACAACAGACGAAGTGGTCTGGATCACGGTG GGAATACTGGTGGTGTTTTTCGCAGTGCAACGGTTTGGCACTGACAAGATTGGCTACACA TTTGCCCCGGTTGTTGTTGTGTGGCTGTTACTCATCTCAGGGATTGGCATCTATGACTTG GTCAAGTACGATGTCGGTGTCTTGAGGGCGTTCAACCCCAAATATATCATCGATTATTTC CGACGAAATAAGAAGGACGGATGGGTCCAGCTCGGTGAAGTTCTTCTTACATTTACCGGC ACAGAAGCTCTCTTTGCTGATTTAGGATACTTCAGCATCAAATCAATTCAGTTAAGCTCT ACCTTTGTCTTGCTCCCATCAGTGTTATGCACCTACATTGGGCAAGCAGCATACCTAAGG AAACACATGGATCAGCAGCACATACAAAACGCTTTCTTCAATTCCATTCCAAGACCTCTG TTCTGGCCAATGTTCGTTCTCGCTATCATGACGTCAGTCATCGGTTGCCAAGCCATGGTG TCTTGTGCCTTTGCAACCATGTCACACTTGCAGACACTGAATTGTTTCCCACGGATTAAG ATACTGCACACATCAAGGCGTTATTCAGGACAGTTGTACAGTCCTGAAGTGAACTTCTTC CTCTGCCTACTTTCCTGTGTAATCACCTTAAGTTTCAGGACGACAGGTTTCATTGTCAAA GCACATGAAATTTGTGTGGTCCTTGTGATGGTTATCACAACTATCCTGATGACTATAGTC ATGCTTCTCGTATGGAAAGTAAATATTTGGTGGATCGTTCTATTCTTTGTCGTCTTCATG TCAACGGAGACCGTCTACCTATCAGCAGTTCTCTACAAGTTCACAAAAGGACCATACATG CCCTTGGCTATGTCAGCTGTTCTAATGGTGATCATGTTCGTGTGGCACTACGTGCATGTG AAGCGATACAAGTTTGAGCTTGAACATACCGTATCACCTAATAAGGTCAGAGAGCTCCTT GAACGGCGTGATCTAAAGAGGGTTCCTGGTGTGGGGCTCTTCTACACTGAATTGGTGCAA GGCATCCCACCGATATTCCCTCACCTTATCGAGAAAATCCCGACCATTCACTCGGTGATC GTGTTCATCTCTATGAAGCACTTGCCTATCCCTCATGTCGATGTCTCGGAGCGCTTCCTC TTCCGGCAAGTGGAGCCCAAGGAGTGCATGGTGTTTCGATGTGTCGCACGATATGGATAT CGGGATACTCTAGAGATGGCTGATGACTTTGTCACCACTCTTGTCGAGTACCTCCAGTAC TATATCCGGGACCTAAATCTATACAACACGGTTGAGCCACTCAAGATGAGCTGCCCAAGC ATTAGAATTGATAGTTTTTCCTGGGATAGACGACCCTCAGGGCATGGCATTTATGCCGAG GAGATGCTTACACCAATCCAATCATTTTCTGAGCTCACAATGCATCCTGTTGGTATGAGC AGCCGATTAGCGCAATTCCAAACAACTAAGATGAGCCTTGAAGAGATGTTGAAGATTGAG GAAGACCAAAAGTTGATCCAACGAGAAGTGGACAATGGTGTGGTTTACATACTTGGGGAG AGTGAAGTGGTAGCGAAACCACATTCCAACTTGCTTAAGAAAGTTGTTGTAAACTACATA TTCAACTTTCTGAGGAAAAACTCTCGAAAAGGAGAGAAGATGTTGTCTATTCCACGCCGC AAGTTGCTCAAGGTTGGAATCACGTACGAAATATAA

Peptide Sequence

PEP ID	Os03t0575200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:21002797:21007629:-1 gene:Os03g0575200 transcript:Os03t0575200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 16 description:Similar to Potassium transporter 1 (OsHAK1). (Os03t0575200-01)
Sequence	MAQQQAGARGSKLEIVAARGGSGGSSSAGDAEAPPLDVLRQDSLYRDATRPAHGHHGQES WMRTLRLGFQCVGILHADLGTSPLYVYQNTFKYGIKHEDDIIGVLSLIIYSFVLFTMVKI VFIALHANDDGDGGTFALYSLISRYAKVCLIPNQQAEDELVTRYNDHGKPPATLRRAQWM KSQLEKKPAKIAVFFLTIFATALAISDCVLNPSVSVLSAVNGLKLRAPHLTTDEVVWITV GILVVFFAVQRFGTDKIGYTFAPVVVVWLLLISGIGIYDLVKYDVGVLRAFNPKYIIDYF RRNKKDGWVQLGEVLLTFTGTEALFADLGYFSIKSIQLSSTFVLLPSVLCTYIGQAAYLR KHMDQQHIQNAFFNSIPRPLFWPMFVLAIMTSVIGCQAMVSCAFATMSHLQTLNCFPRIK ILHTSRRYSGQLYSPEVNFFLCLLSCVITLSFRTTGFIVKAHEICVVLVMVITTILMTIV MLLVWKVNIWWIVLFFVVFMSTETVYLSAVLYKFTKGPYMPLAMSAVLMVIMFVWHYVHV KRYKFELEHTVSPNKVRELLERRDLKRVPGVGLFYTELVQGIPPIFPHLIEKIPTIHSVI VFISMKHLPIPHVDVSERFLFRQVEPKECMVFRCVARYGYRDTLEMADDFVTTLVEYLQY YIRDLNLYNTVEPLKMSCPSIRIDSFSWDRRPSGHGIYAEEMLTPIQSFSELTMHPVGMS SRLAQFQTTKMSLEEMLKIEEDQKLIQREVDNGVVYILGESEVVAKPHSNLLKKVVVNYI FNFLRKNSRKGEKMLSIPRRKLLKVGITYEI

Transcript Sequence

Transcript ID	Os03t0575200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:21002797:21007629:-1 gene:Os03g0575200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 16 description:Similar to Potassium transporter 1 (OsHAK1). (Os03t0575200-01)
Sequence	GAGCTTAGCTGCTGCGAAGTTACACGGCTACGCACCGTTCTTGCTAACTATATACGATTT CTTATACACTTATTTCTTTTGAGGCATAGCGTGCTGGCTAAGTATAGGTAGGTAGCTAGC TCTGCCGCTGCTTATAAAAAGGCAGTGCTGCACGGTGGTGAGCGTACCTAGCTAGAGCAT AGAGAAGCAGGAAAGTTTTGGAGATCGATCGATGGCACAGCAGCAAGCCGGTGCAAGAGG CAGCAAGCTGGAGATCGTCGCCGCCCGGGGAGGAAGTGGCGGCAGCAGCAGCGCCGGCGA TGCGGAGGCGCCGCCGTTGGACGTCCTGAGGCAGGACTCCCTCTACCGCGACGCGACGCG GCCGGCCCACGGCCACCATGGACAGGAGAGCTGGATGAGGACGCTGCGGCTGGGGTTCCA GTGCGTGGGAATCCTGCACGCCGACCTCGGCACGTCGCCGCTCTACGTGTACCAGAACAC ATTCAAGTACGGCATCAAGCACGAGGACGACATCATCGGCGTCCTCTCCCTCATCATCTA CAGCTTCGTGCTATTCACCATGGTCAAGATCGTCTTCATCGCCCTCCACGCCAACGACGA TGGCGACGGTGGGACATTTGCTCTGTACTCGTTGATCTCGCGGTACGCCAAGGTGTGCCT GATCCCAAACCAGCAAGCCGAGGATGAGCTGGTGACGAGGTACAACGACCACGGGAAGCC GCCGGCGACGCTGCGGAGGGCGCAGTGGATGAAGAGCCAGCTCGAGAAGAAGCCCGCCAA GATTGCCGTCTTCTTCCTCACCATCTTCGCCACCGCGCTGGCCATCAGCGACTGTGTGCT AAACCCTTCAGTCTCTGTACTTTCGGCGGTCAACGGCTTGAAACTTAGAGCACCTCATCT GACAACAGACGAAGTGGTCTGGATCACGGTGGGAATACTGGTGGTGTTTTTCGCAGTGCA ACGGTTTGGCACTGACAAGATTGGCTACACATTTGCCCCGGTTGTTGTTGTGTGGCTGTT ACTCATCTCAGGGATTGGCATCTATGACTTGGTCAAGTACGATGTCGGTGTCTTGAGGGC GTTCAACCCCAAATATATCATCGATTATTTCCGACGAAATAAGAAGGACGGATGGGTCCA GCTCGGTGAAGTTCTTCTTACATTTACCGGCACAGAAGCTCTCTTTGCTGATTTAGGATA CTTCAGCATCAAATCAATTCAGTTAAGCTCTACCTTTGTCTTGCTCCCATCAGTGTTATG CACCTACATTGGGCAAGCAGCATACCTAAGGAAACACATGGATCAGCAGCACATACAAAA CGCTTTCTTCAATTCCATTCCAAGACCTCTGTTCTGGCCAATGTTCGTTCTCGCTATCAT GACGTCAGTCATCGGTTGCCAAGCCATGGTGTCTTGTGCCTTTGCAACCATGTCACACTT GCAGACACTGAATTGTTTCCCACGGATTAAGATACTGCACACATCAAGGCGTTATTCAGG ACAGTTGTACAGTCCTGAAGTGAACTTCTTCCTCTGCCTACTTTCCTGTGTAATCACCTT AAGTTTCAGGACGACAGGTTTCATTGTCAAAGCACATGAAATTTGTGTGGTCCTTGTGAT GGTTATCACAACTATCCTGATGACTATAGTCATGCTTCTCGTATGGAAAGTAAATATTTG GTGGATCGTTCTATTCTTTGTCGTCTTCATGTCAACGGAGACCGTCTACCTATCAGCAGT TCTCTACAAGTTCACAAAAGGACCATACATGCCCTTGGCTATGTCAGCTGTTCTAATGGT GATCATGTTCGTGTGGCACTACGTGCATGTGAAGCGATACAAGTTTGAGCTTGAACATAC CGTATCACCTAATAAGGTCAGAGAGCTCCTTGAACGGCGTGATCTAAAGAGGGTTCCTGG TGTGGGGCTCTTCTACACTGAATTGGTGCAAGGCATCCCACCGATATTCCCTCACCTTAT CGAGAAAATCCCGACCATTCACTCGGTGATCGTGTTCATCTCTATGAAGCACTTGCCTAT CCCTCATGTCGATGTCTCGGAGCGCTTCCTCTTCCGGCAAGTGGAGCCCAAGGAGTGCAT GGTGTTTCGATGTGTCGCACGATATGGATATCGGGATACTCTAGAGATGGCTGATGACTT TGTCACCACTCTTGTCGAGTACCTCCAGTACTATATCCGGGACCTAAATCTATACAACAC GGTTGAGCCACTCAAGATGAGCTGCCCAAGCATTAGAATTGATAGTTTTTCCTGGGATAG ACGACCCTCAGGGCATGGCATTTATGCCGAGGAGATGCTTACACCAATCCAATCATTTTC TGAGCTCACAATGCATCCTGTTGGTATGAGCAGCCGATTAGCGCAATTCCAAACAACTAA GATGAGCCTTGAAGAGATGTTGAAGATTGAGGAAGACCAAAAGTTGATCCAACGAGAAGT GGACAATGGTGTGGTTTACATACTTGGGGAGAGTGAAGTGGTAGCGAAACCACATTCCAA CTTGCTTAAGAAAGTTGTTGTAAACTACATATTCAACTTTCTGAGGAAAAACTCTCGAAA AGGAGAGAAGATGTTGTCTATTCCACGCCGCAAGTTGCTCAAGGTTGGAATCACGTACGA AATATAAACATGCCAACAATCAGTAAGATGGTGGCTTATACACAAGGGGTGTAGATTTGT CGAGCAAGCATATATCATGCATGCAGGGTTTGCTTACTTGCAAATGTACTTGGATTTTGT TTGCTTGCGTGACTCTCCATGATAGGAAAAAAAATAAAAGAATTACATGCAAGGAGGAAA ATATGCCAGCAAAATGAAAACAGTCATAATCGAGAATATCACAATGCGATATATGGGTTC CATATATATAGAATTTCTTTTTTC