Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0574900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:20978620:20985759:-1 gene:Os03g0574900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 27 description:Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os03t0574900-01)
Sequence	ATGGGTGACGATGTGCTGGGCAGAGGGAGCCGACGAGATCAGGAGATCGTCCTCGTCGAC ATCGTCGACGATGACGATCACGACGACGTGCCGGCGGTGCGGCGGCAGGACTCCCTGTAC GTCGACGCGACGAGAGCCGGCGGAGCAAACCACCGTGGAGGCCAGGAGGAGAGCTGGGCG AGGACGTTGAAGCTAGCGTTCCAGTGCGTGGGAATACTGTACGGGGACATCGGGACATCG CCGCTGTTCGTGTACTCGAGCACGTTCAAGGACGGCGTCCGCCACCCGGATGACCTGCTC GGCGCCCTCTCCCTCATCATCTACAGCTTCGCCCTCTTCACCATCGTCAAGTACGTCTTC ATCGCCCTCCGCGCCAACGACGACGGCGACGGTGGAACGTTTGCACTGTACACGCTGATT TCTCGGCATGCGAAGGTGAGCTTGATCCCGAACCAGCAGGCGGAAGACGAGCTCATTTCC AAGTACAACACCGGGAAGCCGCAGGCAACGCTGAGGAGAGCTCGGTGGATGAAGGAGCTT CTCGAGACCAACAGAGCCGTCAAGATTTGGCTCTTCCTTCTCACCATCCTAGCCACCGCC ATGGTCATCAGCGATGCCGTCCTTACACCGGCCATTTCAGTTCTGTCTGCGGTTGGTGGG CTGAAAGAGAAAGCACCGAACCTGACAACAGATGAAATCGTGTGGATCACAGTGGCGACT TTGGTAGTCCTGTTTGCAATCCAACGGTTCGGCACAGATAAAATTGGCTACCTGTTTGCG CCGATCATACTCCTGTGGTTGCTCCTCATTGGGTGTGTTGGGATCTACAACACCATTAAG TTTGACACCGGCGTGTTGAGGGCGTTCAACCTGAAATACATTATCGACTACTTCCGAAGG AACAAGAAGGATGGATGGATCTCTCTTAGTGGCATACTCCTCTGCTTCACAGGTACAGAA GCTCTGTTTTCAGATCTAGGATATTTCAGCATTAGATCAATACAGCTAAGCTTCAGCTTT GGTCTAGTCCCTTCAGTGTTGCTTGCTTACATTGGGCAAGCAGCATACTTGAGAGAACAT CCAGAGCATATAGCCAACACTTTCTACAGATCAACTCCAAACGTGATGTTCTGGCCCACG TTCATCCTGGCAGTTGCTGCATCCATTATTGGAAGCCAAGCCATGATATCCTGCGCATTT GCAACCATTTCGCATTTGCAGACACTCAACTGCTTCCCCAGAGTTAAGATACTCCACACA TCAAGGCAATATTCAGGACAACTGTACATTCCAGAAGTGAACTTCTTGCTTTGTGTGGGT GCTTGCCTTGTAACAATTGGTTTCAAGACAACCGTGATTATTGGAGAAGCTCACGCAATA TGTGTGGTCTTTGTGATGATCATCACAACCCTCCTATTGACAATAGTGATGCTCCTAGTA TGGAAGGTCAGCATCTGGTACGTTGCACTATTCTTCATCGTCTTCATGTCATCGGAGTCG ATCTACTTATCGGCGGTCCTATACCAATTTGTGCATGGCGAGTATGTACCTGTGGCCATG TCAGTTTTCCTGATGATTGTGATGACTGTCTGGCACTATGTTCATGTCAAGAGATATGAA TTTGAGCTTGAGCACACTGTGCCCCGTGACAAGGTGAAGGAGCTCTTGGAGCGCCGTGAC ATACAGAGGGTTCCCGGGGTAGGGCTCTTCTACACCGATCTTGTGCAAGGCATACCCCCG GTGTTCCCTCACCTCATTGAGAAGATCCCTTCCATCCACTCTGTGCTCATCTTTGTCTCT ATCAAGCACTTGCCGATTCCGTCGGTCGATAGGTCCGAGCGATTCATCTTTCGACATGTC GACAAAGAAGAGTACAAGGTGTTCCAATGCGTGGCGCGGTACGGTTATCGAGACCCCATG GAGGAGGCCAAGGACTTTGTTGATGCACTTACTGAGAACCTCCAGTACTACATAAGGGAT GTTAACTTCTACACTACAGGCGGTGATCAACATATATTCAGGAGTACCAGCTATGCCAGT TCCATTGCTGAAAGTTTTGCCAGCTATGAGAAACACTCTGGGCATGCAGTCTATGCAGAG GAGATGCTTACACCAGCCGAATCCTTCTCTGAGCATACAAAGCAACTTAGTGGCAGAAGC AAGCATTTTAAACAATTTCAGGTAGAGAATATGAACATGCAAAAGATGGAGAAGGTACAA CAGGAGCAGCAGGCTATCCTCAGAGAGATGGAGAATGGTGTTGTGTACATACTTGGAGAG AGTGACATAGTGGCAAGCCCTCACTCCTCGCTTCTTAACAAGATCATTGTCAATTACATC TATTCTTTCCTTAGAAAAAACTGTAGAAATGGCGAGAAGATGTTGTCTATTCCTCGCAGC CAAGTACTAAAGGTTGGAATCGCATATGAGATATAA

Peptide Sequence

PEP ID	Os03t0574900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:20978620:20985759:-1 gene:Os03g0574900 transcript:Os03t0574900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 27 description:Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os03t0574900-01)
Sequence	MGDDVLGRGSRRDQEIVLVDIVDDDDHDDVPAVRRQDSLYVDATRAGGANHRGGQEESWA RTLKLAFQCVGILYGDIGTSPLFVYSSTFKDGVRHPDDLLGALSLIIYSFALFTIVKYVF IALRANDDGDGGTFALYTLISRHAKVSLIPNQQAEDELISKYNTGKPQATLRRARWMKEL LETNRAVKIWLFLLTILATAMVISDAVLTPAISVLSAVGGLKEKAPNLTTDEIVWITVAT LVVLFAIQRFGTDKIGYLFAPIILLWLLLIGCVGIYNTIKFDTGVLRAFNLKYIIDYFRR NKKDGWISLSGILLCFTGTEALFSDLGYFSIRSIQLSFSFGLVPSVLLAYIGQAAYLREH PEHIANTFYRSTPNVMFWPTFILAVAASIIGSQAMISCAFATISHLQTLNCFPRVKILHT SRQYSGQLYIPEVNFLLCVGACLVTIGFKTTVIIGEAHAICVVFVMIITTLLLTIVMLLV WKVSIWYVALFFIVFMSSESIYLSAVLYQFVHGEYVPVAMSVFLMIVMTVWHYVHVKRYE FELEHTVPRDKVKELLERRDIQRVPGVGLFYTDLVQGIPPVFPHLIEKIPSIHSVLIFVS IKHLPIPSVDRSERFIFRHVDKEEYKVFQCVARYGYRDPMEEAKDFVDALTENLQYYIRD VNFYTTGGDQHIFRSTSYASSIAESFASYEKHSGHAVYAEEMLTPAESFSEHTKQLSGRS KHFKQFQVENMNMQKMEKVQQEQQAILREMENGVVYILGESDIVASPHSSLLNKIIVNYI YSFLRKNCRNGEKMLSIPRSQVLKVGIAYEI

Transcript Sequence

Transcript ID	Os03t0574900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:20978620:20985759:-1 gene:Os03g0574900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 27 description:Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os03t0574900-01)
Sequence	GGCAGCTAGATAGTTTATCAGAACGGAGAGAGATTATTATATGTCTACCGGAGTACTCGC TTGTGAACCTTGTTTATTAGCTAGCTGCCCGGTTAAATTATTTGTGCTATCAGAGAGAGA TGGGTGACGATGTGCTGGGCAGAGGGAGCCGACGAGATCAGGAGATCGTCCTCGTCGACA TCGTCGACGATGACGATCACGACGACGTGCCGGCGGTGCGGCGGCAGGACTCCCTGTACG TCGACGCGACGAGAGCCGGCGGAGCAAACCACCGTGGAGGCCAGGAGGAGAGCTGGGCGA GGACGTTGAAGCTAGCGTTCCAGTGCGTGGGAATACTGTACGGGGACATCGGGACATCGC CGCTGTTCGTGTACTCGAGCACGTTCAAGGACGGCGTCCGCCACCCGGATGACCTGCTCG GCGCCCTCTCCCTCATCATCTACAGCTTCGCCCTCTTCACCATCGTCAAGTACGTCTTCA TCGCCCTCCGCGCCAACGACGACGGCGACGGTGGAACGTTTGCACTGTACACGCTGATTT CTCGGCATGCGAAGGTGAGCTTGATCCCGAACCAGCAGGCGGAAGACGAGCTCATTTCCA AGTACAACACCGGGAAGCCGCAGGCAACGCTGAGGAGAGCTCGGTGGATGAAGGAGCTTC TCGAGACCAACAGAGCCGTCAAGATTTGGCTCTTCCTTCTCACCATCCTAGCCACCGCCA TGGTCATCAGCGATGCCGTCCTTACACCGGCCATTTCAGTTCTGTCTGCGGTTGGTGGGC TGAAAGAGAAAGCACCGAACCTGACAACAGATGAAATCGTGTGGATCACAGTGGCGACTT TGGTAGTCCTGTTTGCAATCCAACGGTTCGGCACAGATAAAATTGGCTACCTGTTTGCGC CGATCATACTCCTGTGGTTGCTCCTCATTGGGTGTGTTGGGATCTACAACACCATTAAGT TTGACACCGGCGTGTTGAGGGCGTTCAACCTGAAATACATTATCGACTACTTCCGAAGGA ACAAGAAGGATGGATGGATCTCTCTTAGTGGCATACTCCTCTGCTTCACAGGTACAGAAG CTCTGTTTTCAGATCTAGGATATTTCAGCATTAGATCAATACAGCTAAGCTTCAGCTTTG GTCTAGTCCCTTCAGTGTTGCTTGCTTACATTGGGCAAGCAGCATACTTGAGAGAACATC CAGAGCATATAGCCAACACTTTCTACAGATCAACTCCAAACGTGATGTTCTGGCCCACGT TCATCCTGGCAGTTGCTGCATCCATTATTGGAAGCCAAGCCATGATATCCTGCGCATTTG CAACCATTTCGCATTTGCAGACACTCAACTGCTTCCCCAGAGTTAAGATACTCCACACAT CAAGGCAATATTCAGGACAACTGTACATTCCAGAAGTGAACTTCTTGCTTTGTGTGGGTG CTTGCCTTGTAACAATTGGTTTCAAGACAACCGTGATTATTGGAGAAGCTCACGCAATAT GTGTGGTCTTTGTGATGATCATCACAACCCTCCTATTGACAATAGTGATGCTCCTAGTAT GGAAGGTCAGCATCTGGTACGTTGCACTATTCTTCATCGTCTTCATGTCATCGGAGTCGA TCTACTTATCGGCGGTCCTATACCAATTTGTGCATGGCGAGTATGTACCTGTGGCCATGT CAGTTTTCCTGATGATTGTGATGACTGTCTGGCACTATGTTCATGTCAAGAGATATGAAT TTGAGCTTGAGCACACTGTGCCCCGTGACAAGGTGAAGGAGCTCTTGGAGCGCCGTGACA TACAGAGGGTTCCCGGGGTAGGGCTCTTCTACACCGATCTTGTGCAAGGCATACCCCCGG TGTTCCCTCACCTCATTGAGAAGATCCCTTCCATCCACTCTGTGCTCATCTTTGTCTCTA TCAAGCACTTGCCGATTCCGTCGGTCGATAGGTCCGAGCGATTCATCTTTCGACATGTCG ACAAAGAAGAGTACAAGGTGTTCCAATGCGTGGCGCGGTACGGTTATCGAGACCCCATGG AGGAGGCCAAGGACTTTGTTGATGCACTTACTGAGAACCTCCAGTACTACATAAGGGATG TTAACTTCTACACTACAGGCGGTGATCAACATATATTCAGGAGTACCAGCTATGCCAGTT CCATTGCTGAAAGTTTTGCCAGCTATGAGAAACACTCTGGGCATGCAGTCTATGCAGAGG AGATGCTTACACCAGCCGAATCCTTCTCTGAGCATACAAAGCAACTTAGTGGCAGAAGCA AGCATTTTAAACAATTTCAGGTAGAGAATATGAACATGCAAAAGATGGAGAAGGTACAAC AGGAGCAGCAGGCTATCCTCAGAGAGATGGAGAATGGTGTTGTGTACATACTTGGAGAGA GTGACATAGTGGCAAGCCCTCACTCCTCGCTTCTTAACAAGATCATTGTCAATTACATCT ATTCTTTCCTTAGAAAAAACTGTAGAAATGGCGAGAAGATGTTGTCTATTCCTCGCAGCC AAGTACTAAAGGTTGGAATCGCATATGAGATATAAGCATATGGGTAATTTTATCATTCTT GAGAAAGTATTTAGAGTTACCATATTTTTCAGTGTAAAATTTAGTACTCCAGGTACTAGG TACCTCGAGGTACCAATTTTAATGTAAATTTGGTACCTCTAGGTACTTTCTGGAGAACTG TAAAATTTCTGTAAGCACATGTATAAGACACAGATGGTAGTTGATATTTCTCACATAATA ATTTTCTAATGGATGTTTTAATGTTCATGTGAATAGAGGAGAATGATTGATTGTAGTTTT ATTAAACGCC