Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0572900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:20868361:20875711:-1 gene:Os03g0572900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phenolics efflux zero 2, phenolics efflux transporter 2 description:Multi antimicrobial extrusion protein MatE family protein. (Os03t0572900-01)
Sequence	ATGGCCGGCGGCGTAAGCGACGGCGGCGCGGCCCACGGCGCGTCGGGGAGGCTGGAGAGC ATCCTGTCGGACTCGTCGATGCCGCTCGCCCGCCGCGCGTGGGCGGCGACGACCATCGAG CTCGGCCTCCTGACGCGGATTGCGGCGCCGGCGGTGGTGATGTACATGATCAACTACCTC ATGTCCATGTCCACGCAGATCTTCTCCGGCCACCTCGGCAACCTCGAGCTCGCCGCCGCC TCCCTCGGCAATAACGGCATCCAGATGTTCGCCTACGGCCTCATGCTCGGAATGGGTAGC GCCGTGGAGACGCTGTGCGGGCAGGCGTTCGGTGCACACAAGTACGACATGCTGGGAGTC TACCTGCAGCGCTCCGCCGTGCTCCTGACCATCACCGGCGTCCCGCTCGCGGTCATCTAC GGCTTCTCCGAGCCGATCCTCGTCTTCATGGGGCAGTCGCCGGAGATCGCCCGCGCCGCG GCCATCTTCGTCTACGGCCTGATCCCGCAGATCTTCGCGTACGCCATCAACTTCCCCATC CAGAAGTACATGCAGGCGCAGAGCATCGTGCTGCCCAGCGCCTACATCTCCGCCGCCACG CTCGCGCTGCACGTGCTGCTGAGCTGGGTCGTCGTCTACAAGGTCGGCCTCGGCCTGCTC GGCGCCTCGCTGGTGCTCAGCATCAGCTGGTGGGTCATCGTCGCGGCGCAGTTCGCCTAC ATCGTCACCAGCCCGACGTGCCGGCACACCTGGACGGGCTTCACCTGGCAGGCGTTCGCC GGCCTCTGGGACTTCCTCAAGCTCTCGGCGGCGTCCGCCGTGATGCTCTGCCTCGAGTCG TGGTACTTCCAGGTGCTCGTGCTCATCGCCGGCCTACTCCCGAACCCTGAACTTGCATTG GATGCCCTATCTGTGTGCATGACGATTTCAGGCTGGGTGTTCATGATCTCAGTAGGATTC AATGCCGCAGCAAGTGTGAGAGTGAGCAATGAGCTTGGTGCGGGCAACCCGAAGGCTGCA TATTTTTCAGTGTGGGTCGTGACTATCTCCTGTGCGATAATCTCTGCCATCCTTGCGGTT GTGATCCTCTGCCTCCGCAACTACATTAGCTACTTGTTCACGGAGGGAGAAGTTGTGTCA AATGCGGTGGCAGATCTCTGCCCGCTCCTCGCCATCACGCTCATTCTCAATGGAATCCAA CCAGTTCTGTCCGGAGTGGCTGTTGGATGTGGATGGCAACAATTTGTAGCTTACGTCAAC ATTGGCTGCTACTATATCGTCGGTGTTCCCCTTGGTGTTCTTCTTGGGTTCGTCTTCAAG CTTGGTGTAAAGGGCATCTGGGGTGGGATGCTTGGAGGAACATGCATGCAGACGGCCATT CTTGTCTGGGTCACCTTGAGAACTGATTGGAACAATGAGGTCGAGGAAGCACAGAAAAGG TTGAACAAGTGGGAGGACAAGAAAAAGGAGCCACTTCTTACAGGGATTAGGGACAACAAC TAA

Peptide Sequence

PEP ID	Os03t0572900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:20868361:20875711:-1 gene:Os03g0572900 transcript:Os03t0572900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phenolics efflux zero 2, phenolics efflux transporter 2 description:Multi antimicrobial extrusion protein MatE family protein. (Os03t0572900-01)
Sequence	MAGGVSDGGAAHGASGRLESILSDSSMPLARRAWAATTIELGLLTRIAAPAVVMYMINYL MSMSTQIFSGHLGNLELAAASLGNNGIQMFAYGLMLGMGSAVETLCGQAFGAHKYDMLGV YLQRSAVLLTITGVPLAVIYGFSEPILVFMGQSPEIARAAAIFVYGLIPQIFAYAINFPI QKYMQAQSIVLPSAYISAATLALHVLLSWVVVYKVGLGLLGASLVLSISWWVIVAAQFAY IVTSPTCRHTWTGFTWQAFAGLWDFLKLSAASAVMLCLESWYFQVLVLIAGLLPNPELAL DALSVCMTISGWVFMISVGFNAAASVRVSNELGAGNPKAAYFSVWVVTISCAIISAILAV VILCLRNYISYLFTEGEVVSNAVADLCPLLAITLILNGIQPVLSGVAVGCGWQQFVAYVN IGCYYIVGVPLGVLLGFVFKLGVKGIWGGMLGGTCMQTAILVWVTLRTDWNNEVEEAQKR LNKWEDKKKEPLLTGIRDNN

Transcript Sequence

Transcript ID	Os03t0572900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:20868361:20875711:-1 gene:Os03g0572900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phenolics efflux zero 2, phenolics efflux transporter 2 description:Multi antimicrobial extrusion protein MatE family protein. (Os03t0572900-01)
Sequence	ACGGGTCTTTTGCCTCCGCCACTCTCCCTCCCATCCCTACTCCTCGTCGTTGCGCCTCCC ACGCACCTCCATGGCCGGCGGCGTAAGCGACGGCGGCGCGGCCCACGGCGCGTCGGGGAG GCTGGAGAGCATCCTGTCGGACTCGTCGATGCCGCTCGCCCGCCGCGCGTGGGCGGCGAC GACCATCGAGCTCGGCCTCCTGACGCGGATTGCGGCGCCGGCGGTGGTGATGTACATGAT CAACTACCTCATGTCCATGTCCACGCAGATCTTCTCCGGCCACCTCGGCAACCTCGAGCT CGCCGCCGCCTCCCTCGGCAATAACGGCATCCAGATGTTCGCCTACGGCCTCATGCTCGG AATGGGTAGCGCCGTGGAGACGCTGTGCGGGCAGGCGTTCGGTGCACACAAGTACGACAT GCTGGGAGTCTACCTGCAGCGCTCCGCCGTGCTCCTGACCATCACCGGCGTCCCGCTCGC GGTCATCTACGGCTTCTCCGAGCCGATCCTCGTCTTCATGGGGCAGTCGCCGGAGATCGC CCGCGCCGCGGCCATCTTCGTCTACGGCCTGATCCCGCAGATCTTCGCGTACGCCATCAA CTTCCCCATCCAGAAGTACATGCAGGCGCAGAGCATCGTGCTGCCCAGCGCCTACATCTC CGCCGCCACGCTCGCGCTGCACGTGCTGCTGAGCTGGGTCGTCGTCTACAAGGTCGGCCT CGGCCTGCTCGGCGCCTCGCTGGTGCTCAGCATCAGCTGGTGGGTCATCGTCGCGGCGCA GTTCGCCTACATCGTCACCAGCCCGACGTGCCGGCACACCTGGACGGGCTTCACCTGGCA GGCGTTCGCCGGCCTCTGGGACTTCCTCAAGCTCTCGGCGGCGTCCGCCGTGATGCTCTG CCTCGAGTCGTGGTACTTCCAGGTGCTCGTGCTCATCGCCGGCCTACTCCCGAACCCTGA ACTTGCATTGGATGCCCTATCTGTGTGCATGACGATTTCAGGCTGGGTGTTCATGATCTC AGTAGGATTCAATGCCGCAGCAAGTGTGAGAGTGAGCAATGAGCTTGGTGCGGGCAACCC GAAGGCTGCATATTTTTCAGTGTGGGTCGTGACTATCTCCTGTGCGATAATCTCTGCCAT CCTTGCGGTTGTGATCCTCTGCCTCCGCAACTACATTAGCTACTTGTTCACGGAGGGAGA AGTTGTGTCAAATGCGGTGGCAGATCTCTGCCCGCTCCTCGCCATCACGCTCATTCTCAA TGGAATCCAACCAGTTCTGTCCGGAGTGGCTGTTGGATGTGGATGGCAACAATTTGTAGC TTACGTCAACATTGGCTGCTACTATATCGTCGGTGTTCCCCTTGGTGTTCTTCTTGGGTT CGTCTTCAAGCTTGGTGTAAAGGGCATCTGGGGTGGGATGCTTGGAGGAACATGCATGCA GACGGCCATTCTTGTCTGGGTCACCTTGAGAACTGATTGGAACAATGAGGTCGAGGAAGC ACAGAAAAGGTTGAACAAGTGGGAGGACAAGAAAAAGGAGCCACTTCTTACAGGGATTAG GGACAACAACTAAGTTGATGAATCAAGATTTCTTGTCAGTTCAACTATCCCCCACGTCGC CAGCATTTGCTTTGATATTTTCTACCAGCATGGCGCATGCAGAGGGAAACTGCAGGATCA GGCATATATCCGAGTTGGGAGACCAGTGAAAGATGTGCTTCATTGAGCTCAAATCTGGTT TACAATAACATTAGGTCATGTGGTTTACTTCCTTTTGGGACATCTGGAGATGTGGAACGA TGCCTACTGAAACCTCAGAAATTTTGCAGTAGAACTAGAATGGGAGTGGTAAAGTGAACT GTTTTTAGAAATGGATTAAAAACTGGGCCTCTACATCCAAATTGGATGTACAAAGCC