Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0572250-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:20837973:20839908:-1 gene:Os03g0572250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0572250-01)
Sequence

ATGGTGACGACGCGGGGGATGGCCGCGACGGCGTCGGCTGCGGAAGGGTACGAGAGGGAG
AGGGAGGCGAGGATCCAGGAGAACATGGAGCGGATGCAGAAGCTGGGGATACGTGATCTT
GCCAACCGCTTCAACCAGTCCGCGACCGGTTTCGCCGGCGGCGGGAGCTGGAGCGGGAGC
GATCGCTGGAGGCGGAAGGTGCCTGTGACGGCGGGACCCGCATCCCCATCGCCTGCTCGT
CGGTCACTCAGGCTGAAGAGCCTAGATCCTGTTAACTACTGCGAGATTCGGACAAGAAAG
GGCAAGGATGTTGAAGGTGGAAGCTCTGTTCCAATTGAGGTTGGGTCCGAGGAAGAAGTT
AACGCAGAAGATGCTGCTCCGGTCGCTAAGGAGGATCAGGGCCATTCAGAGGCTATCCAG
GATGAAGATGCTGACCACCACCAAGTGAATGACCCCGCTGATGATGATGGTGACGAGGAT
GACAGGGAGTCTGTGGTGACGTCTAGTTCTCAGGATTGTGAGGTTAATCTAGAAGACATT
ATTGGGTGTGCCACTTCATCTAAGCCGGCTGGCCCAAAGAAGAGAAAGTTGATCGAACGA
AACCCTGACTATGTGTTGCGAGAGCTAGCTTGA

Peptide Sequence

PEP ID

Os03t0572250-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:20837973:20839908:-1 gene:Os03g0572250 transcript:Os03t0572250-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0572250-01)
Sequence

MVTTRGMAATASAAEGYEREREARIQENMERMQKLGIRDLANRFNQSATGFAGGGSWSGS
DRWRRKVPVTAGPASPSPARRSLRLKSLDPVNYCEIRTRKGKDVEGGSSVPIEVGSEEEV
NAEDAAPVAKEDQGHSEAIQDEDADHHQVNDPADDDGDEDDRESVVTSSSQDCEVNLEDI
IGCATSSKPAGPKKRKLIERNPDYVLRELA

Transcript Sequence

Transcript ID

Os03t0572250-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:20837973:20839908:-1 gene:Os03g0572250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0572250-01)
Sequence

ATAAACCCTCATCGTCAGTTCGTCACCCACCGTCGCCTCGGGGAAACCGCGCCAGTGAGA
AGGCATCAAGCCGTCAAGCACGGCCAGCTACTAGCCATGGTGACGACGCGGGGGATGGCC
GCGACGGCGTCGGCTGCGGAAGGGTACGAGAGGGAGAGGGAGGCGAGGATCCAGGAGAAC
ATGGAGCGGATGCAGAAGCTGGGGATACGTGATCTTGCCAACCGCTTCAACCAGTCCGCG
ACCGGTTTCGCCGGCGGCGGGAGCTGGAGCGGGAGCGATCGCTGGAGGCGGAAGGTGCCT
GTGACGGCGGGACCCGCATCCCCATCGCCTGCTCGTCGGTCACTCAGGCTGAAGAGCCTA
GATCCTGTTAACTACTGCGAGATTCGGACAAGAAAGGGCAAGGATGTTGAAGGTGGAAGC
TCTGTTCCAATTGAGGTTGGGTCCGAGGAAGAAGTTAACGCAGAAGATGCTGCTCCGGTC
GCTAAGGAGGATCAGGGCCATTCAGAGGCTATCCAGGATGAAGATGCTGACCACCACCAA
GTGAATGACCCCGCTGATGATGATGGTGACGAGGATGACAGGGAGTCTGTGGTGACGTCT
AGTTCTCAGGATTGTGAGGTTAATCTAGAAGACATTATTGGGTGTGCCACTTCATCTAAG
CCGGCTGGCCCAAAGAAGAGAAAGTTGATCGAACGAAACCCTGACTATGTGTTGCGAGAG
CTAGCTTGATCAGGTCCCGTTCCAACAGATCATGAACAGCCTGATCTTATGAGCATGACA
GTCTCTTTTTGGTGCCCGTGCCCCGTGAACGATCTGTCAGTATCTTTTGCCGAGGAAAGA
CAGGTTTATTGGACCAGTGTGTTTCAGTTCATTTGCACGTACGTGCTGTGTGTTAGTGTC
ATCATCGTTGGCTAGGCAATTGTGGCGCACGCTCTTTTGCTCGAAACTTTTATGGCTGTG
CCAACTGCCAAGTATGGTTCTGCTTGATGATATAAGCTTATAATAATGCTCTATGAATCA
CAATAGGCTACAT