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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0568500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:20558776:20561694:-1 gene:Os03g0568500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0136, Transmembrane domain containing protein. (Os03t0568500-01)
Sequence

ATGCACGACTTCTGCTTCACGATCCCCTACGGCTTCGCCGTCCTGGCCGGCGGCGTGCTG
GGCTACGCCCGCCGCGGCAGCACCGCCTCCCTGGCCGGCGGCGCGGGCGCCGGCGCGCTC
CTCCTCCTCGCGGGCTTCGTCAGCCTCAAGACCTTCGAGAAGCGCCGCAACTCCTACCTC
GCCCTCGCCCTCGAGACCCTATGTGCACTAGCTTTGACTTATGTTATGGGGCAGAGATAC
CTTGAGACTTCAAAGATAATGCCAGCTGGTGTCGTTGCTGGCCTCAGTGCTTTGATGTCT
GCGTTCTACCTGTTCAAAATTGCAACTGGTGGCAACCATATCCCACCGAAGAAAGAGTGA

Peptide Sequence

PEP ID

Os03t0568500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:20558776:20561694:-1 gene:Os03g0568500 transcript:Os03t0568500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0136, Transmembrane domain containing protein. (Os03t0568500-01)
Sequence

MHDFCFTIPYGFAVLAGGVLGYARRGSTASLAGGAGAGALLLLAGFVSLKTFEKRRNSYL
ALALETLCALALTYVMGQRYLETSKIMPAGVVAGLSALMSAFYLFKIATGGNHIPPKKE

Transcript Sequence

Transcript ID

Os03t0568500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:20558776:20561694:-1 gene:Os03g0568500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0136, Transmembrane domain containing protein. (Os03t0568500-01)
Sequence

GAAATGACGAAAGTGCGCCTCCCGCCGCAGACCAGACCGACCACCGATCGACGACTTCTC
TCCGCGGCGCACCACGGATTAGCCAAAAATAAGCGAGAGCGAGTACGAGAGAGATTGAGA
GAGAGAGTCAGAGAGAGAGAGAAGAAACTGCTCTCGAGATCTCACCGGCGAGGCGGGGCG
AGATCTGGTAAGAGAGAAGGAGGGAGGGAGGCCGAGAGAGCGAGATGCACGACTTCTGCT
TCACGATCCCCTACGGCTTCGCCGTCCTGGCCGGCGGCGTGCTGGGCTACGCCCGCCGCG
GCAGCACCGCCTCCCTGGCCGGCGGCGCGGGCGCCGGCGCGCTCCTCCTCCTCGCGGGCT
TCGTCAGCCTCAAGACCTTCGAGAAGCGCCGCAACTCCTACCTCGCCCTCGCCCTCGAGA
CCCTATGTGCACTAGCTTTGACTTATGTTATGGGGCAGAGATACCTTGAGACTTCAAAGA
TAATGCCAGCTGGTGTCGTTGCTGGCCTCAGTGCTTTGATGTCTGCGTTCTACCTGTTCA
AAATTGCAACTGGTGGCAACCATATCCCACCGAAGAAAGAGTGAACCAGGCTTTGCTTGT
GAAGCATGTTTTGTTATACTCTAAGACTACGACAGATTTGTGTTGTGGAGTTTCATTGTA
AGTCCAGTGATCAGCAAAGCCATTTTTCGCCTGTAATTCTTTAGAGTGCACTTCTGATGT
CTGAACAATGTAAAAGAATTAAATATTTAACTTCCTACGGTACGTGTATATGAATGATAT
ACTCCTGAACTTTTT