Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0567600-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:20515545:20518445:-1 gene:Os03g0567600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylan arabinosyltransferase 3 description:Glycosyltransferase AER61, uncharacterized domain containing protein. (Os03t0567600-01);Glycosyltransferase AER61, uncharacterized domain containing protein. (Os03t0567600-02);Similar to Glycosyltransferase. (Os03t0567600-03)
Sequence	ATGAAGGCGGGCGAGCGGCCGAAGCTGGTCCGGGGCGTCCGGCAGGAGTCGCGGCGGTTC CGGCTGCTGGTCATCGTCGTCGGCTTCTTCCTCGTCTCCCTCACCTTCGTCTTCGTTTCC AAGCCCGACGCCATCCTCTTCAGCTTGAACGGCAAGCTTCCGGTGGAACAGGCGCCGACG TCCATCCTGATCCAGCAGAAGGTCAACGAGCCCTCCGGCGAGTCCCGGAAAACCTCCACC GACGCTCTCCGTGGTGACCCCAAAGTGGTCGACGACGAAGCTGATGCGAAACCAAAAGGG ACAGGAGGAGGCAGCGAGGAGGAAGAGGGGAGAGTGCTGAGCGAGCCGGACCCGACCAGC GGAATGATGGAGCCGACCCACAACAAGGACGGCAACGGCCATAAATCTCACCAGGAGACG TTAGGCGGTGGAGGAGACGGGGAGAGTAAAGGGAATGACGAGGAGGGCGAACACGCGGAG CAGAAGCATAAAGTCACCCTCCCAACAGTTTCCAATTACACAATTCATGATGCTGCTGAG GACACTGAAAATGCCAAGCAAGAAGGTATGAATAATGTCCAGCAGGGTAGCAAGCCCTTG TGTGATTTCTCTAATTTCAGAGCAAATGTCTGCGAGATGCGTGGTGACGTTAGAATTCAT CCAACTGCCACTTCGGTCTTGTTCATGGAGCCTGAAGGTTCGCAGAGGGATGAGGTGTGG AAGATTAAGCCGTACCCTCGGAAAGGGGATGAATTCTGCCTCAGCCATATCACTGAGGTA ACCGTGAAATCGAGCAAAGTGGCGCCTGAATGCACCAAATACCACGATGTGCCTGCTGTG ATCTTCTCACTGACCGGCTACACGGGGAACCTGTTCCATGATTTCACTGATGTGCTCGTC CCTCTTTTCACGACTGCAAGCGAGTTCAATGGAGAAGTTCAGTTCCTTATAACAGACATG GCACTTTGGTGGACGATCAAGTACCAGACAGTTCTCCAGAAGTTATCCAAGTATCCTGTG ATTGATTTCAGCAAGGATGACCAAGTGCACTGCTTCAAGCATGCCATTGTCGGGCTGCAT GCCTATATGGAGTTCACAATCGACTCAACCAAGGCACCGCACAACTATTCGATGGCTGAT TTCAACAGATTCATGCGTGGAGCTTACTCGCTGGGCAGGGACAGTGTGACCGTGCTCGGT GAGTACCCCAAGATCAAGCCAAGGTTGCTCATCATCAAGAGGCACCGTACAAGAATGTTT CTCAACCTGGATGAGATCATTTCCATGGCAGAGGAGCTTGGCTTTGAGGTGGTGATTGAC GAGGCCAATGTGAGCTCCGATATCTCCCGGTTTGCGCGGCTGGTTAACTCCGTCGACGTG ATGATGGGTGTCCATGGTGCTGGGCTCACAAACTGTGTGTTCCTGCCACAGCATGCGACG CTCATTCAGATAGTGCCATGGGGTGGCCTGGACTGGATATCACGCACCGATTTCGGCAAC CCTGCAGAGCTGATGGGTCTGAGGTACAAGCAATACAGCATCGGCGTCGACGAGAGCAGC TTGACAGATCAGTACCCTAGAGACCACGAGATTTTCAAGAATCCTATCTCATTCCACCAG CGCGGATTCGATTTCATCAGGCAGACTTTCATGGACAAACAGAATGTGAAGCTGGACTGC AAGAGGTTCAGGCCTATTCTTCTGGAGGCACTGGATAATCTAAACCCGTAG

Peptide Sequence

PEP ID	Os03t0567600-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:20515545:20518445:-1 gene:Os03g0567600 transcript:Os03t0567600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylan arabinosyltransferase 3 description:Glycosyltransferase AER61, uncharacterized domain containing protein. (Os03t0567600-01);Glycosyltransferase AER61, uncharacterized domain containing protein. (Os03t0567600-02);Similar to Glycosyltransferase. (Os03t0567600-03)
Sequence	MKAGERPKLVRGVRQESRRFRLLVIVVGFFLVSLTFVFVSKPDAILFSLNGKLPVEQAPT SILIQQKVNEPSGESRKTSTDALRGDPKVVDDEADAKPKGTGGGSEEEEGRVLSEPDPTS GMMEPTHNKDGNGHKSHQETLGGGGDGESKGNDEEGEHAEQKHKVTLPTVSNYTIHDAAE DTENAKQEGMNNVQQGSKPLCDFSNFRANVCEMRGDVRIHPTATSVLFMEPEGSQRDEVW KIKPYPRKGDEFCLSHITEVTVKSSKVAPECTKYHDVPAVIFSLTGYTGNLFHDFTDVLV PLFTTASEFNGEVQFLITDMALWWTIKYQTVLQKLSKYPVIDFSKDDQVHCFKHAIVGLH AYMEFTIDSTKAPHNYSMADFNRFMRGAYSLGRDSVTVLGEYPKIKPRLLIIKRHRTRMF LNLDEIISMAEELGFEVVIDEANVSSDISRFARLVNSVDVMMGVHGAGLTNCVFLPQHAT LIQIVPWGGLDWISRTDFGNPAELMGLRYKQYSIGVDESSLTDQYPRDHEIFKNPISFHQ RGFDFIRQTFMDKQNVKLDCKRFRPILLEALDNLNP

Transcript Sequence

Transcript ID	Os03t0567600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:20515545:20518445:-1 gene:Os03g0567600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylan arabinosyltransferase 3 description:Glycosyltransferase AER61, uncharacterized domain containing protein. (Os03t0567600-01);Glycosyltransferase AER61, uncharacterized domain containing protein. (Os03t0567600-02);Similar to Glycosyltransferase. (Os03t0567600-03)
Sequence	CTTCTTCCGCGCCTGTTTCTTGGCTCCCGGCCGAGGACGGCGGGCGGGATGAAGGCGGGC GAGCGGCCGAAGCTGGTCCGGGGCGTCCGGCAGGAGTCGCGGCGGTTCCGGCTGCTGGTC ATCGTCGTCGGCTTCTTCCTCGTCTCCCTCACCTTCGTCTTCGTTTCCAAGCCCGACGCC ATCCTCTTCAGCTTGAACGGCAAGCTTCCGGTGGAACAGGCGCCGACGTCCATCCTGATC CAGCAGAAGGTCAACGAGCCCTCCGGCGAGTCCCGGAAAACCTCCACCGACGCTCTCCGT GGTGACCCCAAAGTGGTCGACGACGAAGCTGATGCGAAACCAAAAGGGACAGGAGGAGGC AGCGAGGAGGAAGAGGGGAGAGTGCTGAGCGAGCCGGACCCGACCAGCGGAATGATGGAG CCGACCCACAACAAGGACGGCAACGGCCATAAATCTCACCAGGAGACGTTAGGCGGTGGA GGAGACGGGGAGAGTAAAGGGAATGACGAGGAGGGCGAACACGCGGAGCAGAAGCATAAA GTCACCCTCCCAACAGTTTCCAATTACACAATTCATGATGCTGCTGAGGACACTGAAAAT GCCAAGCAAGAAGGTATGAATAATGTCCAGCAGGGTAGCAAGCCCTTGTGTGATTTCTCT AATTTCAGAGCAAATGTCTGCGAGATGCGTGGTGACGTTAGAATTCATCCAACTGCCACT TCGGTCTTGTTCATGGAGCCTGAAGGTTCGCAGAGGGATGAGGTGTGGAAGATTAAGCCG TACCCTCGGAAAGGGGATGAATTCTGCCTCAGCCATATCACTGAGGTAACCGTGAAATCG AGCAAAGTGGCGCCTGAATGCACCAAATACCACGATGTGCCTGCTGTGATCTTCTCACTG ACCGGCTACACGGGGAACCTGTTCCATGATTTCACTGATGTGCTCGTCCCTCTTTTCACG ACTGCAAGCGAGTTCAATGGAGAAGTTCAGTTCCTTATAACAGACATGGCACTTTGGTGG ACGATCAAGTACCAGACAGTTCTCCAGAAGTTATCCAAGTATCCTGTGATTGATTTCAGC AAGGATGACCAAGTGCACTGCTTCAAGCATGCCATTGTCGGGCTGCATGCCTATATGGAG TTCACAATCGACTCAACCAAGGCACCGCACAACTATTCGATGGCTGATTTCAACAGATTC ATGCGTGGAGCTTACTCGCTGGGCAGGGACAGTGTGACCGTGCTCGGTGAGTACCCCAAG ATCAAGCCAAGGTTGCTCATCATCAAGAGGCACCGTACAAGAATGTTTCTCAACCTGGAT GAGATCATTTCCATGGCAGAGGAGCTTGGCTTTGAGGTGGTGATTGACGAGGCCAATGTG AGCTCCGATATCTCCCGGTTTGCGCGGCTGGTTAACTCCGTCGACGTGATGATGGGTGTC CATGGTGCTGGGCTCACAAACTGTGTGTTCCTGCCACAGCATGCGACGCTCATTCAGATA GTGCCATGGGGTGGCCTGGACTGGATATCACGCACCGATTTCGGCAACCCTGCAGAGCTG ATGGGTCTGAGGTACAAGCAATACAGCATCGGCGTCGACGAGAGCAGCTTGACAGATCAG TACCCTAGAGACCACGAGATTTTCAAGAATCCTATCTCATTCCACCAGCGCGGATTCGAT TTCATCAGGCAGACTTTCATGGACAAACAGAATGTGAAGCTGGACTGCAAGAGGTTCAGG CCTATTCTTCTGGAGGCACTGGATAATCTAAACCCGTAGGCTTTGAGATGCTCTTGTACA ATGTTCCATTTTTCTTTTCACGGTTCGTTCCTTTTACTTTTATGTAGTAAATCTGTTGTT TATTCTCTCTCTATCTCTCATGGCTTTCATGAGGAGATGCAAATTGTCTGAATTATAGAA AAATT