Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0566800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:20492421:20496890:-1 gene:Os03g0566800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 34 description:DEAD box RNA helicase homologous to eukaryotic initiation factor 4AIII (eIF4AIII), Core components of the exon junction complex (EJC), Regulation of plant height, pollen, and seed development (Os03t0566800-01)
Sequence	ATGGCGGCGGCCACCACGTCCCGGCGCGGCCCCGGCGCCATGGACGACGAGAACCTCACC TTCGAGACCTCCCCCGGGGTCGAGGTCATCAGCAGCTTCGACCAGATGGGGATCCGCGAG GACCTCCTCCGCGGCATCTACGCCTACGGCTTCGAGAAGCCCTCCGCCATCCAGCAGCGC GCCGTCCTCCCCATCATCAGCGGCCGCGACGTCATCGCCCAGGCCCAGTCCGGAACCGGC AAGACCTCCATGATCTCGCTCTCCGTCTGCCAGATCGTCGACACCGCCGTCCGAGAGGTT CAGGCCTTGATACTCTCACCAACTAGAGAACTTGCTGCACAAACAGAAAGAGTTATGCTG GCCATTGGTGATTACATCAATATCCAAGTGCATGCTTGTATTGGTGGCAAAAGTATTGGT GAGGATATTAGAAAGCTTGAGCATGGAGTGCATGTTGTGTCAGGAACACCTGGCAGAGTC TGTGATATGATCAAGAGAAGGACCTTGCGTACAAGAGCCATTAAGCTCCTAATTCTGGAT GAAGCCGATGAGATGTTGGGCAGAGGCTTTAAGGATCAGATATATGATGTCTACAGATAT CTACCCCCAGAGCTCCAGGTTTGCTTGATCTCCGCAACTCTGCCACATGAGATCTTGGAA ATGACCAGCAAGTTCATGACTGACCCAGTCCGGATCCTTGTAAAGCGTGATGAATTGACC CTAGAGGGCATCAAACAATTCTTTGTTGCTGTTGAGAAAGAAGAATGGAAGTTTGATACT CTTTGTGATCTTTATGATACACTGACAATCACCCAAGCTGTCATTTTCTGCAACACGAAG AGAAAGGTTGATTGGCTTACAGAAAGAATGCGCAGCAATAACTTCACGGTATCAGCTATG CATGGTGACATGCCTCAAAAGGAAAGGGATGCCATTATGGGTGAATTCAGGTCTGGTGCA ACCCGTGTTCTAATTACGACAGATGTGTGGGCTCGAGGCCTGGATGTTCAGCAGGTCTCT CTTGTCATAAACTATGATCTTCCAAATAATCGTGAACTTTACATCCATCGCATTGGTCGC TCTGGACGTTTTGGTCGCAAGGGTGTGGCCATCAATTTTGTCAAAAAGGAAGACATCCGT ATCCTGAGAGATATTGAGCAGTACTACAGCACACAGATTGATGAAATGCCAATGAATGTT GCTGATCTAATTTGA

Peptide Sequence

PEP ID	Os03t0566800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:20492421:20496890:-1 gene:Os03g0566800 transcript:Os03t0566800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 34 description:DEAD box RNA helicase homologous to eukaryotic initiation factor 4AIII (eIF4AIII), Core components of the exon junction complex (EJC), Regulation of plant height, pollen, and seed development (Os03t0566800-01)
Sequence	MAAATTSRRGPGAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQR AVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVML AIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILD EADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELT LEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAM HGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGR SGRFGRKGVAINFVKKEDIRILRDIEQYYSTQIDEMPMNVADLI

Transcript Sequence

Transcript ID	Os03t0566800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:20492421:20496890:-1 gene:Os03g0566800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 34 description:DEAD box RNA helicase homologous to eukaryotic initiation factor 4AIII (eIF4AIII), Core components of the exon junction complex (EJC), Regulation of plant height, pollen, and seed development (Os03t0566800-01)
Sequence	ACAGGCAGGAAGTCTCCCCACCCACGACGACCACCCCCATCTCCTTCCCCTTTCTAGGGT TTCGCTTCGTCTCCCCCAATGGCGGCGGCCACCACGTCCCGGCGCGGCCCCGGCGCCATG GACGACGAGAACCTCACCTTCGAGACCTCCCCCGGGGTCGAGGTCATCAGCAGCTTCGAC CAGATGGGGATCCGCGAGGACCTCCTCCGCGGCATCTACGCCTACGGCTTCGAGAAGCCC TCCGCCATCCAGCAGCGCGCCGTCCTCCCCATCATCAGCGGCCGCGACGTCATCGCCCAG GCCCAGTCCGGAACCGGCAAGACCTCCATGATCTCGCTCTCCGTCTGCCAGATCGTCGAC ACCGCCGTCCGAGAGGTTCAGGCCTTGATACTCTCACCAACTAGAGAACTTGCTGCACAA ACAGAAAGAGTTATGCTGGCCATTGGTGATTACATCAATATCCAAGTGCATGCTTGTATT GGTGGCAAAAGTATTGGTGAGGATATTAGAAAGCTTGAGCATGGAGTGCATGTTGTGTCA GGAACACCTGGCAGAGTCTGTGATATGATCAAGAGAAGGACCTTGCGTACAAGAGCCATT AAGCTCCTAATTCTGGATGAAGCCGATGAGATGTTGGGCAGAGGCTTTAAGGATCAGATA TATGATGTCTACAGATATCTACCCCCAGAGCTCCAGGTTTGCTTGATCTCCGCAACTCTG CCACATGAGATCTTGGAAATGACCAGCAAGTTCATGACTGACCCAGTCCGGATCCTTGTA AAGCGTGATGAATTGACCCTAGAGGGCATCAAACAATTCTTTGTTGCTGTTGAGAAAGAA GAATGGAAGTTTGATACTCTTTGTGATCTTTATGATACACTGACAATCACCCAAGCTGTC ATTTTCTGCAACACGAAGAGAAAGGTTGATTGGCTTACAGAAAGAATGCGCAGCAATAAC TTCACGGTATCAGCTATGCATGGTGACATGCCTCAAAAGGAAAGGGATGCCATTATGGGT GAATTCAGGTCTGGTGCAACCCGTGTTCTAATTACGACAGATGTGTGGGCTCGAGGCCTG GATGTTCAGCAGGTCTCTCTTGTCATAAACTATGATCTTCCAAATAATCGTGAACTTTAC ATCCATCGCATTGGTCGCTCTGGACGTTTTGGTCGCAAGGGTGTGGCCATCAATTTTGTC AAAAAGGAAGACATCCGTATCCTGAGAGATATTGAGCAGTACTACAGCACACAGATTGAT GAAATGCCAATGAATGTTGCTGATCTAATTTGAGTGCTTGAGTGGCACAATCATGTTTTT GATCATCTGGTCTGGCAACAAGTGAGCTTGTTTGTTGTGATTTTGGTTGACATGTTTTGC CGAGACTGTTGCTGTGAACCTAAAAAGGGTTGCGAGTCTAACACTAGTGATTGGTTTCGT TTCCTCTTTGGCTTGTGGCATGATCTGTATATATTTTAGCGCCAGCTCATGTAACACTAT TATTGCATTTCTTCTCTGAACGCGTGACTTTGTTAACTATATTCATGGCAACAAGGATTT GATGTTGGTTTCTCGT