Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0566600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:20484942:20487487:1 gene:Os03g0566600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyltransferase FkbM domain containing protein. (Os03t0566600-01)
Sequence

ATGCCGGCGCCGCCCGCCGCTTCCTGGCGCCGGCACGCTGCTGCCGCCGCCGCCTCCTCC
TCCACGCGCAAAACCCTCCTCCTCCTCCTCCCCGTCTTCCTCCTCCTCCTCCTCTTCGTC
CTCTCCAGGGCTCCTGATCTCACCCTCTCCCCCGCGGCCGCCTCCTCCCGCCACCTCTCC
GCCGGGGTTCGCCCGTTCGATTGCTACGCGTCGCAGCAGGCCTCGCCGGTCTTCGCCAGC
CTGGTGGAGGGCGTGCCCCACCCCTTCTTCTACTCCCTCGCCGACATGGGGGCTCTTCCC
GACCACCCCCACAAGAACATCGCTCGCATCCTCAAGGGCAAGCGCTTCCGCAAGCCCGAC
ATCTCCGAGACAATCCAGCAGCTGCTCGGGGGGAAGGTGGGGATCGGATCCCGTGGTGTG
GTGGTCGACGTGGGTGCCAATGTTGGGATGGCGTCGTTCGCCGCGGCCGTGATGGGGTTC
CGGGTGGTGGCCTTCGAGCCCGTCTTGGAGAATCTGCAGAGGATTTGCGATGGGGTGTAT
CTCAACAGGGTGCAGGACCAGGTTGTGGTGTACCATGCCGCGGCTTCTGATCGAGTTGGG
AACATCACAATGCATAAGGTGATTGGACGACTCGACAACAGTGCTATATCTGCAACCGGT
GCAAAATTGGCTTTTAAAGCAAATGAAGAAATTGCTGTTGAGGTTGCTACAATACCACTG
GATGAAGTCATTCTAGATGCAGAGCGAGTGGTTTTGATCAAAATTGATGTTCAGGGGTGG
GAATACCATGTTCTGAGAGGTGCATCAAAGTTGCTTTCAAGGAGGAAAGGTGATGCTCCC
TACCTTATATATGAAGAAGATGAACGCCTACTGCAGGCAAGCAACAGTAGTGCACGAGAG
ATAAGGGCATTTCTTAGTAGTGTTGGTTACAATCACTGTACACGTCATGGCACAGATGCT
CACTGCACGAAAAACTAG

Peptide Sequence

PEP ID

Os03t0566600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:20484942:20487487:1 gene:Os03g0566600 transcript:Os03t0566600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyltransferase FkbM domain containing protein. (Os03t0566600-01)
Sequence

MPAPPAASWRRHAAAAAASSSTRKTLLLLLPVFLLLLLFVLSRAPDLTLSPAAASSRHLS
AGVRPFDCYASQQASPVFASLVEGVPHPFFYSLADMGALPDHPHKNIARILKGKRFRKPD
ISETIQQLLGGKVGIGSRGVVVDVGANVGMASFAAAVMGFRVVAFEPVLENLQRICDGVY
LNRVQDQVVVYHAAASDRVGNITMHKVIGRLDNSAISATGAKLAFKANEEIAVEVATIPL
DEVILDAERVVLIKIDVQGWEYHVLRGASKLLSRRKGDAPYLIYEEDERLLQASNSSARE
IRAFLSSVGYNHCTRHGTDAHCTKN

Transcript Sequence

Transcript ID

Os03t0566600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:20484942:20487487:1 gene:Os03g0566600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyltransferase FkbM domain containing protein. (Os03t0566600-01)
Sequence

ACCGCTTCACTCCCCGTCGGCGACCAGCCGACTTTCCCCAATGCCGGCGCCGCCCGCCGC
TTCCTGGCGCCGGCACGCTGCTGCCGCCGCCGCCTCCTCCTCCACGCGCAAAACCCTCCT
CCTCCTCCTCCCCGTCTTCCTCCTCCTCCTCCTCTTCGTCCTCTCCAGGGCTCCTGATCT
CACCCTCTCCCCCGCGGCCGCCTCCTCCCGCCACCTCTCCGCCGGGGTTCGCCCGTTCGA
TTGCTACGCGTCGCAGCAGGCCTCGCCGGTCTTCGCCAGCCTGGTGGAGGGCGTGCCCCA
CCCCTTCTTCTACTCCCTCGCCGACATGGGGGCTCTTCCCGACCACCCCCACAAGAACAT
CGCTCGCATCCTCAAGGGCAAGCGCTTCCGCAAGCCCGACATCTCCGAGACAATCCAGCA
GCTGCTCGGGGGGAAGGTGGGGATCGGATCCCGTGGTGTGGTGGTCGACGTGGGTGCCAA
TGTTGGGATGGCGTCGTTCGCCGCGGCCGTGATGGGGTTCCGGGTGGTGGCCTTCGAGCC
CGTCTTGGAGAATCTGCAGAGGATTTGCGATGGGGTGTATCTCAACAGGGTGCAGGACCA
GGTTGTGGTGTACCATGCCGCGGCTTCTGATCGAGTTGGGAACATCACAATGCATAAGGT
GATTGGACGACTCGACAACAGTGCTATATCTGCAACCGGTGCAAAATTGGCTTTTAAAGC
AAATGAAGAAATTGCTGTTGAGGTTGCTACAATACCACTGGATGAAGTCATTCTAGATGC
AGAGCGAGTGGTTTTGATCAAAATTGATGTTCAGGGGTGGGAATACCATGTTCTGAGAGG
TGCATCAAAGTTGCTTTCAAGGAGGAAAGGTGATGCTCCCTACCTTATATATGAAGAAGA
TGAACGCCTACTGCAGGCAAGCAACAGTAGTGCACGAGAGATAAGGGCATTTCTTAGTAG
TGTTGGTTACAATCACTGTACACGTCATGGCACAGATGCTCACTGCACGAAAAACTAGGC
ATGTGCTTTTTATTCATGTAAGTTGATGATCATCTATGAACAGAGAAACATTCATATATG
ATGTGCTGATCTGTAGAAAAGCATTTTCCCTCTCAGGCAGCACTTTCATGAATAAAAATA
GTTAGTCAACTTTTAATT