Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0565100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:20363579:20370035:-1 gene:Os03g0565100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OST3 description:OST3/OST6 family protein. (Os03t0565100-01)
Sequence

ATGGAGTCCCCACCCCACCCCCTCCTCCTCCTTCTCACGCTCCTCGTCGCCGCCGGCGCC
GCCTCCGCCGGCGCCGATGACCTGGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCG
TCGGGCGTGATCCACCTCACCGACACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCG
CGCCCCTACTCCGTGCTCGTCTTCTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTC
CACCTCCCCCAGCTCCGCCGCGAGTTCGCCCTCCTCTCCGCCTCCTTCCTCGCCCACAAC
CCCGCCTCCGCCGACCTCTTCTTCGCCGACATCGAGTTCTCGGAGTCGCAGCACTCGTTC
GCGCAGTTCGGCGTCAACTCCCTCCCCCACGTCCGCCTCGTCCGCCCCGAGCACACCCGC
CTCGCTGGCTCCGAGCAGATGGACCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCG
GAGTTCGTGGAGTCCCGCACCGGCCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTC
TCCCGCAACCAGATGATCCTACTCGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATC
AAGAGGATCATGGACGGGGAGACCTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCG
CTGTTCATTTACTTCTTCAGCGTGTCCGGGGGGATGTACGGGATCATCAGGCACACGCCG
ATGTTCATCACCGACCGGTCCGATCCAAACAAGCTCGTGTTCTTCTACCAGGGGTCTGGG
ATGCAGCTCGGCGCCGAGGGTTTTGCGGTTGGGTTCTTGTACACTCTCGTGGGGCTCATG
ATCGCCATGGTGACACACTTGCTGGTGAGGGTGGAGAGCCTGCAGATCCAGCGTTTTACG
ATGCTGGCGGTCATGATAATTGGGTGGTGGGCAGTGAAGAAGGTGATTCTTTTGGATAAC
TGGAAGACTGGATATAGCATTCATACCTTCTGGCCCAGCAGCTGGAGGTAA

Peptide Sequence

PEP ID

Os03t0565100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:20363579:20370035:-1 gene:Os03g0565100 transcript:Os03t0565100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OST3 description:OST3/OST6 family protein. (Os03t0565100-01)
Sequence

MESPPHPLLLLLTLLVAAGAASAGADDLVAELQSLRSRSPSGVIHLTDTSITRFLSAPAP
RPYSVLVFFDAASLHSKTDLHLPQLRREFALLSASFLAHNPASADLFFADIEFSESQHSF
AQFGVNSLPHVRLVRPEHTRLAGSEQMDQSHFSRLADSMAEFVESRTGLEVGPIVRPPLV
SRNQMILLVILFLVSIPFLIKRIMDGETLFHDRRVWMAGALFIYFFSVSGGMYGIIRHTP
MFITDRSDPNKLVFFYQGSGMQLGAEGFAVGFLYTLVGLMIAMVTHLLVRVESLQIQRFT
MLAVMIIGWWAVKKVILLDNWKTGYSIHTFWPSSWR

Transcript Sequence

Transcript ID

Os03t0565100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:20363579:20370035:-1 gene:Os03g0565100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OST3 description:OST3/OST6 family protein. (Os03t0565100-01)
Sequence

GTCCGTTCGTCTCCTCGCCCAGATCCGCCAATCGCCCATGGAGTCCCCACCCCACCCCCT
CCTCCTCCTTCTCACGCTCCTCGTCGCCGCCGGCGCCGCCTCCGCCGGCGCCGATGACCT
GGTCGCCGAGCTGCAATCCCTGCGGTCCCGCTCCCCGTCGGGCGTGATCCACCTCACCGA
CACCTCCATCACCCGCTTCCTATCCGCCCCGGCGCCGCGCCCCTACTCCGTGCTCGTCTT
CTTCGACGCCGCCTCGCTCCACTCCAAGACCGACCTCCACCTCCCCCAGCTCCGCCGCGA
GTTCGCCCTCCTCTCCGCCTCCTTCCTCGCCCACAACCCCGCCTCCGCCGACCTCTTCTT
CGCCGACATCGAGTTCTCGGAGTCGCAGCACTCGTTCGCGCAGTTCGGCGTCAACTCCCT
CCCCCACGTCCGCCTCGTCCGCCCCGAGCACACCCGCCTCGCTGGCTCCGAGCAGATGGA
CCAGTCCCACTTCTCCCGCCTCGCCGACTCCATGGCGGAGTTCGTGGAGTCCCGCACCGG
CCTCGAGGTCGGCCCCATCGTCCGCCCGCCCCTCGTCTCCCGCAACCAGATGATCCTACT
CGTCATCCTCTTCTTGGTCTCCATTCCGTTCCTCATCAAGAGGATCATGGACGGGGAGAC
CTTGTTCCATGACCGACGGGTTTGGATGGCTGGGGCGCTGTTCATTTACTTCTTCAGCGT
GTCCGGGGGGATGTACGGGATCATCAGGCACACGCCGATGTTCATCACCGACCGGTCCGA
TCCAAACAAGCTCGTGTTCTTCTACCAGGGGTCTGGGATGCAGCTCGGCGCCGAGGGTTT
TGCGGTTGGGTTCTTGTACACTCTCGTGGGGCTCATGATCGCCATGGTGACACACTTGCT
GGTGAGGGTGGAGAGCCTGCAGATCCAGCGTTTTACGATGCTGGCGGTCATGATAATTGG
GTGGTGGGCAGTGAAGAAGGTGATTCTTTTGGATAACTGGAAGACTGGATATAGCATTCA
TACCTTCTGGCCCAGCAGCTGGAGGTAAATGCTTGTACAATGGCAGACGATATGGATGGT
TTCTTCCTTCGGTTTCTGAGGTTATGGAATTATCCAACTTTGACCGTGCTGAGATAGAGC
ATATTTTGGAGTGTTGGGACTTGCCAAGTTTATTTTTGCAAATTTCTGATGCTGTAGTAT
GAAATATGTAGACCTCAAGTCATGTTAGTTATGCAGAGGAATTATGACATTGCACATCTA
TCACTTGAACAAGAAAGTTTGGCTTTTGAATTATTGGTTTGGTTTCTTCGAATGATGTAT
CGTGGTTGATGTAGCTTGTCAGGTGCATTGTCATTTTGGAAAATTGCTTAATGGAAATCA
TTAGCATTGAAGGGGCC