Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0449200-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:19244015:19248324:1 gene:Os03g0449200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHOOTLESS 4 description:Similar to Protein argonaute 7. (Os03t0449200-00)
Sequence	ATGGAGGGGGAGCGGGAGGGGGTGGTGGCCAAGAACGAGGACAACGCAGGCGGAGGTGGT GGTGGATTAGGTACAGGTGGTAATGGTGGTGGCGGCGGCGGCGGCAGCGCGAACGGGCGG AGGAGGTGGAGGGGCGGGGGCAGCAGCGGGTATAGGCAGCACCCGATCATCCAGGCCTAC CCGGCGCTCCTGCCGCTGCCGATAAACGGCGCCACCGGCCACGCACACATCAACGGCGCG GTCTCGCTGCCGCTGCCTCTGCCGCCGCCGGTGCTGCTGTACCTGCAGCCGCCACCGCCA CCGCCGCTGCTGCCCCTGCTCCCCAAGGTCGCCGCCGCCACGTTCTACGGCAAGCCACCC AAGGCGGCCGACGCGGCACCGAGGGGCTCAATGTGGAAGCACAGGCCATCGAAAAAGCCG CCACCGCATGCCATTACCGCCGCGCTGCTGCCGCTCCCGCGGGATGGCAAGGCGCTTCAG GAGAAAATATTCTTCGCAAATGAAAGAAAAACATCTGAAAAGGAGGTAAATCATGTAGAC ACCCATGAGAAGTTTACTGTTGCACCACTGGATAATGCAATAGCACGGAGACCTGACATG GGTGGTGTTGAGGGGGCCGAGATCCCTCTTTCTGCAAACCATTTCCTTGTCCAGTTTGAT CCTGGCCAGAAGATTTTCCATTACAATGTTGACATATCTCCGCGTCCATCAAAAGAAACA GCAAGAATGATCAAGAAAAAATTAGTTGAAGAAAATCCAAGTGTTCTCTCAGGTTCCCAA CCAGCCTTTGATGGCCGCAAGAACTTATATAGTCCTGTTAGATTTCAGGAGGACAGGGTT GAGTTCTTTGTCAGCCTCCCAGTTGCATTAGCACGATGTTCAGTAGTTAAAGAGGATACT GGCCACATGCTTGACAAACAGAAACTCAAGACTTTCAAAGTGAATGTCCGGTTGGTTTCG AAGTTATGTGGTGAGGACTTGAACAAATATCTGAACGAGGACAAGGATGGCATCCCTCTT CCACAAGATTACCTCCATGCATTGGATGTTGTGTTGCGTGAAGGTGCTATGGAAAGTTCT ATCCTTGTGGGTCGGTCACTGTATGCACGCTCCATGGGGGAAGCAAGGGACATTGGTGGT GGTGCTGTTGGATTAAGAGGTTTCTTTCAGAGATTGAGGCCAACCAAGCAAGGCCTTGCC CTTAATGTTGATCTCTCACTCTCAGCTTTCCACGAGAGCACAGGCATAATTTCATACTTG CAGAAGCGCTGTGACTTCTTGAAGGACCTTCCACAGAAGAAAACAAGGGCTTTGGCAGAA GAGGAGCACAGGGAGGTGGAGAAAGCATTGAAAAATATCCGGGTATTTGTGTGCCATCGT GAGACTAATCAAAGGTACCATGTGCATAGCTTGACTAAGGAGACAACAGAGAACCTCAAG TTTCGCGACCGAAGTGGGAAGGATCTTATGGTGGTGGATTACTTCAAGGAGCACTATAAC CATGATATACAATTCAGGAACCTTCCATGCTTGCAGATTGGCAGGAGCAAGCCATGTTAT GTGCCAATGGAGCTTTGTGTAGTTTGTGAGGGCCAGAAGTTTCTTGGCAAGCTGTCTGAT GAACAAACTTCTAAGATTCTGAAAATGGGTTGTGAAAGACCGAGTGAAAGAAAGGGAATC ATAAAGGGTGTTGTCAAAGGTGCATTTCATGCAAGAAGCGATACTTATGCTGATCAGTTT AGTCTCCAAGTGTCGAAACACATGACGAAACTCTCTGGGAGGGTTCTCTTGCCCCCAAAA TTAAAGCTTGGCAGCAGTGGGCGCATCAAGGACATAACACCGGACCGATTTGATCGACAG TGGAGCTTTCTGGATAGCCATGTTGCAGAGGGTTCCAAGATCAAGAGTTGGGCCTTGATA AGTTTTGGTGGCACCCCGGAGCAGCACTTTTGCATTACAAAGTTTGTGAACCAGCTATCA AATCGGTGTGAGCAGCTAGGAATTCTGCTAAACAAGAAGACCATTATCAGCCCAATATTT GAGAGGATTCAACTACTCAATAACGTGGGAATTTTGGAGGGCAAGCTCAAGAAAATTCAA GAAGCTGCATCAGGCAACTTGCAGTTGCTAATCTGTGTCATGGAGAGGAGGCACCAAGGC TATGCTGATCTGAAGCGAATTGCAGAAACATCCATTGGTGTTGTGACACAATGTTGCCTT TACTCCAACTTGAGCAAGCTGACCTCTCAATTCTTGACGAATTTGGCTTTGAAGATCAAT GCGAAACTCGGTGGCTGCAATATTGCCCTATACAGCAGCTTTCCATGCCAAATTCCTAGA ATATTTTTGTCGGAGGAGCCGGTGATGTTCATGGGTGCTGATGTCACACACCCGCATCCC CTTGATGATTCAAGTCCATCAGTGGTTGCTGTAGTTGCAAGCATGAATTGGCCGTCAGCA AATAAGTACATCTCCAGGATGAGATCACAGACACACCGGAAAGAAATCATTGAGCAACTG GATGTTATGGCTGGTGAACTGCTTGAAGAGTTTCTAAAAGAAGTGGGGAAGCTCCCAAGC AGAATCATATTCTTCAGAGATGGTGTGAGCGAGACACAGTTCTACAAGGTGCTGAAGGAG GAGATGCATGCAGTGCGCACAACTTGTTCGAGGTATCCGGGTTACAAACCCTTGATCACA TTCATCGTAGTTCAGAAGAGGCATCACACTAGACTCTTCCACAGGGAGAGGAATGGCAGC TCGTCACACTACTCTGATCAGAACATACCACCAGGAACAGTTGTGGACACTGTGATTACA CACCCAAGGGAATTTGATTTCTATCTGTGCAGCCACTGGGGCACCAAGGGGACGAGCCGG CCAACTCATTATCATGTTCTGTGGGATGAGAATAACTTCCGTTCCGACGAAGTGCAGCAG TTGATACACAATCTTTGCTACACATTTGCTCGGTGCACCAGGCCAGTTTCTCTTGTCCCA CCGGCTTACTACGCACATCTCGCGGCATATAGAGGCAGGCTGTACCTTGAGAGGTCAGAT ACAACTATGTACAGGGTCAGTCCGTTGCAGACTGTGCCGCTACCTAAGCTCAGAGACAAT GTTAAGAGGCTCATGTTCTACTGCTAG

Peptide Sequence

PEP ID	Os03t0449200-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:19244015:19248324:1 gene:Os03g0449200 transcript:Os03t0449200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHOOTLESS 4 description:Similar to Protein argonaute 7. (Os03t0449200-00)
Sequence	MEGEREGVVAKNEDNAGGGGGGLGTGGNGGGGGGGSANGRRRWRGGGSSGYRQHPIIQAY PALLPLPINGATGHAHINGAVSLPLPLPPPVLLYLQPPPPPPLLPLLPKVAAATFYGKPP KAADAAPRGSMWKHRPSKKPPPHAITAALLPLPRDGKALQEKIFFANERKTSEKEVNHVD THEKFTVAPLDNAIARRPDMGGVEGAEIPLSANHFLVQFDPGQKIFHYNVDISPRPSKET ARMIKKKLVEENPSVLSGSQPAFDGRKNLYSPVRFQEDRVEFFVSLPVALARCSVVKEDT GHMLDKQKLKTFKVNVRLVSKLCGEDLNKYLNEDKDGIPLPQDYLHALDVVLREGAMESS ILVGRSLYARSMGEARDIGGGAVGLRGFFQRLRPTKQGLALNVDLSLSAFHESTGIISYL QKRCDFLKDLPQKKTRALAEEEHREVEKALKNIRVFVCHRETNQRYHVHSLTKETTENLK FRDRSGKDLMVVDYFKEHYNHDIQFRNLPCLQIGRSKPCYVPMELCVVCEGQKFLGKLSD EQTSKILKMGCERPSERKGIIKGVVKGAFHARSDTYADQFSLQVSKHMTKLSGRVLLPPK LKLGSSGRIKDITPDRFDRQWSFLDSHVAEGSKIKSWALISFGGTPEQHFCITKFVNQLS NRCEQLGILLNKKTIISPIFERIQLLNNVGILEGKLKKIQEAASGNLQLLICVMERRHQG YADLKRIAETSIGVVTQCCLYSNLSKLTSQFLTNLALKINAKLGGCNIALYSSFPCQIPR IFLSEEPVMFMGADVTHPHPLDDSSPSVVAVVASMNWPSANKYISRMRSQTHRKEIIEQL DVMAGELLEEFLKEVGKLPSRIIFFRDGVSETQFYKVLKEEMHAVRTTCSRYPGYKPLIT FIVVQKRHHTRLFHRERNGSSSHYSDQNIPPGTVVDTVITHPREFDFYLCSHWGTKGTSR PTHYHVLWDENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAYYAHLAAYRGRLYLERSD TTMYRVSPLQTVPLPKLRDNVKRLMFYC

Transcript Sequence

Transcript ID	Os03t0449200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:19244015:19248324:1 gene:Os03g0449200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHOOTLESS 4 description:Similar to Protein argonaute 7. (Os03t0449200-00)
Sequence	GGCGTGTTGATACTCTTACTACTACCACCAAAAAGCTGTGCACGGACAGGTTAAAGCGGT GTACCGCTGACTCGCGCGGCCATGGAGGGGGAGCGGGAGGGGGTGGTGGCCAAGAACGAG GACAACGCAGGCGGAGGTGGTGGTGGATTAGGTACAGGTGGTAATGGTGGTGGCGGCGGC GGCGGCAGCGCGAACGGGCGGAGGAGGTGGAGGGGCGGGGGCAGCAGCGGGTATAGGCAG CACCCGATCATCCAGGCCTACCCGGCGCTCCTGCCGCTGCCGATAAACGGCGCCACCGGC CACGCACACATCAACGGCGCGGTCTCGCTGCCGCTGCCTCTGCCGCCGCCGGTGCTGCTG TACCTGCAGCCGCCACCGCCACCGCCGCTGCTGCCCCTGCTCCCCAAGGTCGCCGCCGCC ACGTTCTACGGCAAGCCACCCAAGGCGGCCGACGCGGCACCGAGGGGCTCAATGTGGAAG CACAGGCCATCGAAAAAGCCGCCACCGCATGCCATTACCGCCGCGCTGCTGCCGCTCCCG CGGGATGGCAAGGCGCTTCAGGAGAAAATATTCTTCGCAAATGAAAGAAAAACATCTGAA AAGGAGGTAAATCATGTAGACACCCATGAGAAGTTTACTGTTGCACCACTGGATAATGCA ATAGCACGGAGACCTGACATGGGTGGTGTTGAGGGGGCCGAGATCCCTCTTTCTGCAAAC CATTTCCTTGTCCAGTTTGATCCTGGCCAGAAGATTTTCCATTACAATGTTGACATATCT CCGCGTCCATCAAAAGAAACAGCAAGAATGATCAAGAAAAAATTAGTTGAAGAAAATCCA AGTGTTCTCTCAGGTTCCCAACCAGCCTTTGATGGCCGCAAGAACTTATATAGTCCTGTT AGATTTCAGGAGGACAGGGTTGAGTTCTTTGTCAGCCTCCCAGTTGCATTAGCACGATGT TCAGTAGTTAAAGAGGATACTGGCCACATGCTTGACAAACAGAAACTCAAGACTTTCAAA GTGAATGTCCGGTTGGTTTCGAAGTTATGTGGTGAGGACTTGAACAAATATCTGAACGAG GACAAGGATGGCATCCCTCTTCCACAAGATTACCTCCATGCATTGGATGTTGTGTTGCGT GAAGGTGCTATGGAAAGTTCTATCCTTGTGGGTCGGTCACTGTATGCACGCTCCATGGGG GAAGCAAGGGACATTGGTGGTGGTGCTGTTGGATTAAGAGGTTTCTTTCAGAGATTGAGG CCAACCAAGCAAGGCCTTGCCCTTAATGTTGATCTCTCACTCTCAGCTTTCCACGAGAGC ACAGGCATAATTTCATACTTGCAGAAGCGCTGTGACTTCTTGAAGGACCTTCCACAGAAG AAAACAAGGGCTTTGGCAGAAGAGGAGCACAGGGAGGTGGAGAAAGCATTGAAAAATATC CGGGTATTTGTGTGCCATCGTGAGACTAATCAAAGGTACCATGTGCATAGCTTGACTAAG GAGACAACAGAGAACCTCAAGTTTCGCGACCGAAGTGGGAAGGATCTTATGGTGGTGGAT TACTTCAAGGAGCACTATAACCATGATATACAATTCAGGAACCTTCCATGCTTGCAGATT GGCAGGAGCAAGCCATGTTATGTGCCAATGGAGCTTTGTGTAGTTTGTGAGGGCCAGAAG TTTCTTGGCAAGCTGTCTGATGAACAAACTTCTAAGATTCTGAAAATGGGTTGTGAAAGA CCGAGTGAAAGAAAGGGAATCATAAAGGGTGTTGTCAAAGGTGCATTTCATGCAAGAAGC GATACTTATGCTGATCAGTTTAGTCTCCAAGTGTCGAAACACATGACGAAACTCTCTGGG AGGGTTCTCTTGCCCCCAAAATTAAAGCTTGGCAGCAGTGGGCGCATCAAGGACATAACA CCGGACCGATTTGATCGACAGTGGAGCTTTCTGGATAGCCATGTTGCAGAGGGTTCCAAG ATCAAGAGTTGGGCCTTGATAAGTTTTGGTGGCACCCCGGAGCAGCACTTTTGCATTACA AAGTTTGTGAACCAGCTATCAAATCGGTGTGAGCAGCTAGGAATTCTGCTAAACAAGAAG ACCATTATCAGCCCAATATTTGAGAGGATTCAACTACTCAATAACGTGGGAATTTTGGAG GGCAAGCTCAAGAAAATTCAAGAAGCTGCATCAGGCAACTTGCAGTTGCTAATCTGTGTC ATGGAGAGGAGGCACCAAGGCTATGCTGATCTGAAGCGAATTGCAGAAACATCCATTGGT GTTGTGACACAATGTTGCCTTTACTCCAACTTGAGCAAGCTGACCTCTCAATTCTTGACG AATTTGGCTTTGAAGATCAATGCGAAACTCGGTGGCTGCAATATTGCCCTATACAGCAGC TTTCCATGCCAAATTCCTAGAATATTTTTGTCGGAGGAGCCGGTGATGTTCATGGGTGCT GATGTCACACACCCGCATCCCCTTGATGATTCAAGTCCATCAGTGGTTGCTGTAGTTGCA AGCATGAATTGGCCGTCAGCAAATAAGTACATCTCCAGGATGAGATCACAGACACACCGG AAAGAAATCATTGAGCAACTGGATGTTATGGCTGGTGAACTGCTTGAAGAGTTTCTAAAA GAAGTGGGGAAGCTCCCAAGCAGAATCATATTCTTCAGAGATGGTGTGAGCGAGACACAG TTCTACAAGGTGCTGAAGGAGGAGATGCATGCAGTGCGCACAACTTGTTCGAGGTATCCG GGTTACAAACCCTTGATCACATTCATCGTAGTTCAGAAGAGGCATCACACTAGACTCTTC CACAGGGAGAGGAATGGCAGCTCGTCACACTACTCTGATCAGAACATACCACCAGGAACA GTTGTGGACACTGTGATTACACACCCAAGGGAATTTGATTTCTATCTGTGCAGCCACTGG GGCACCAAGGGGACGAGCCGGCCAACTCATTATCATGTTCTGTGGGATGAGAATAACTTC CGTTCCGACGAAGTGCAGCAGTTGATACACAATCTTTGCTACACATTTGCTCGGTGCACC AGGCCAGTTTCTCTTGTCCCACCGGCTTACTACGCACATCTCGCGGCATATAGAGGCAGG CTGTACCTTGAGAGGTCAGATACAACTATGTACAGGGTCAGTCCGTTGCAGACTGTGCCG CTACCTAAGCTCAGAGACAATGTTAAGAGGCTCATGTTCTACTGCTAGCTTCACCGCCCT GAATTTCATGGTATCGGGACTCTCCTACAGTAATTTTCCTCCCAAAAAAAAAGGTGTTTC AGATGTTATCTTTAACGTATATCGCCTGTCATCGTGTTTTTCTATATTTGTCCGAATTTT GGAAAATATGTATAGTGCTCCTGGACAGAA