Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0441500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:18686899:18689372:-1 gene:Os03g0441500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER F FAMILY MEMBER 2 description:ABC transporter-like domain containing protein. (Os03t0441500-01);Similar to ABC transporter. (Os03t0441500-02)
Sequence	ATGGGCCGCAAAGATACTTCCTCGTCGTCCTCCGCCGCCGGCGGCAAGAAGGACAAGCCG ATGTCGGTCTCCGCCATTCTGGCCTCCATGGACGCGCCGGCGTCCAAGGCCAAGCCATCC AAGGCGGCGTCCAAGCCCAAGCCCTCCAAGGCGCCCGCGTCGTCTTACATGGGCGACATC GACCTGCCCCCCTCCGATGAGGAGGAGGACGACGCCGACCTCGTTGCCATGGCCACGAAG CCCAAGGCGGCCCGCGCCACCGTCGACCTCAACGCCATCGCGCCCTCGCAGAAGGACGCG AAGAAGAAGGACAAGCGCGAGGCGATGGCGGCCGCGCAAGCCGAGGCGGCCAAGCAGGAG GCGCTCCGCGACGACCGCGACGCATTCTCTGTCGTTATTGGCGCGCGCGTCGCTGGATCC GCCGGGGCCTCCGAGGGTGACTCCGCCGCCGCCGATGACAACATCAAGGATATTGTGCTC GAGAACTTCTCTGTTTCTGCCCGCGGGAAGGAGCTACTCAAGAACGCCTCGCTCCGGATC TCGCACGGCCGGCGCTATGGCCTCGTCGGGCCCAACGGCATGGGCAAGTCCACCCTTCTG AAGCTGCTGTCATGGCGGCAGGTCCCGGTGCCCCGGAGCATTGATGTCCTGCTTGTGGAG CAGGAAATTATTGGAGACAATCGTTCAGCGCTCGAGGCTGTTGTTGCTGCTGATGAAGAG CTCGCAGCGCTTCGTGCCGAGCAGGCAAAGCTCGAGGCCTCTAACGATGCTGATGACAAT GAGCGGCTTGCTGAGGTTTATGAGAAGCTCAACCTCCGGGATTCTGATGCTGCCCGGGCT CGTGCATCCAAGATCCTTGCTGGGCTGGGGTTTGATCAGGCTATGCAGGCCAGGTCCACT AAATCGTTCAGTGGTGGCTGGAGGATGCGCATCTCGCTTGCTCGTGCGCTGTTCATGCAG CCAACATTGTTGCTGCTTGATGAACCGACTAATCATCTTGACCTCCGAGCTGTTCTTTGG TTGGAGCAATACTTGTGCTCACAGTGGAAGAAAACACTGATTGTTGTGTCCCATGATCGC GACTTCCTGAACACAGTTTGCAATGAGATCATTCATTTGCATGATAAGAATCTGCATGTT TATCGTGGAAATTTTGACGACTTTGAGAGTGGGTATGAACAGAAGAGGAAGGAGATGAAT AGGAAGTTTGAGGTGTTTGAAAAGCAGATGAAGGCAGCAAAGAAGACTGGGAGCAAGGCA GCGCAAGACAAGGTCAAAGGTCAGGCACTATCAAAGGCTAATAAGGAGGCTGCCAAGAGC AAGGGGAAGGGAAAGAATGTAGCAAATGATGACGACGACATGAAGCCAGCTGATCTTCCA CAGAAATGGCTTGACTACAAGGTTGAGTTCCACTTCCCAGAGCCAACTTTGCTCACACCA CCGCTCCTTCAGCTCATTGAGGTGGGCTTCAGCTACCCTAATAGGCCAGATTTCAAGCTG TCTGGTGTTGATGTTGGCATTGACATGGGAACACGTGTTGCAATTGTTGGTCCCAATGGG GCAGGAAAATCTACACTTCTTAATTTACTTGCTGGTGATCTTACCCCAACCAAAGGAGAG GTAAGGAGGAGTCAGAAGCTGAGGATTGGGCGATACTCACAGCATTTTGTTGACTTACTG ACAATGGAGGAAAATGCAGTTCAGTATTTGCTCAGGCTCCATCCTGATCAGGAGGGAATG AGCAAAGCAGAGGCTGTACGTGCGAAGCTCGGAAAATTTGGTTTACCAGGGCACAACCAT CTCACTCCAATAGTTAAATTATCTGGTGGACAGAAGGCCCGTGTTGTGTTCACTTCAATA TCAATGTCACATCCCCACATTCTCCTGCTGGATGAGCCAACAAATCACCTAGACATGCAA AGTATCGATGCATTGGCAGATGCACTGGATGAATTCACTGGTGGTGTGGTCTTGGTTAGC CATGACTCGAGATTGATCTCTAGAGTGTGTGACGATGAGCAGAGGAGTGAGATATGGGTT GTAGAAGATGGCACTGTGAACAAATTTGATGGAACATTTGAGGACTACAAGGATGAACTT TTGGAAGAAATCAAAAAGGAAGTTGAAGAGTAA

Peptide Sequence

PEP ID	Os03t0441500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:18686899:18689372:-1 gene:Os03g0441500 transcript:Os03t0441500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER F FAMILY MEMBER 2 description:ABC transporter-like domain containing protein. (Os03t0441500-01);Similar to ABC transporter. (Os03t0441500-02)
Sequence	MGRKDTSSSSSAAGGKKDKPMSVSAILASMDAPASKAKPSKAASKPKPSKAPASSYMGDI DLPPSDEEEDDADLVAMATKPKAARATVDLNAIAPSQKDAKKKDKREAMAAAQAEAAKQE ALRDDRDAFSVVIGARVAGSAGASEGDSAAADDNIKDIVLENFSVSARGKELLKNASLRI SHGRRYGLVGPNGMGKSTLLKLLSWRQVPVPRSIDVLLVEQEIIGDNRSALEAVVAADEE LAALRAEQAKLEASNDADDNERLAEVYEKLNLRDSDAARARASKILAGLGFDQAMQARST KSFSGGWRMRISLARALFMQPTLLLLDEPTNHLDLRAVLWLEQYLCSQWKKTLIVVSHDR DFLNTVCNEIIHLHDKNLHVYRGNFDDFESGYEQKRKEMNRKFEVFEKQMKAAKKTGSKA AQDKVKGQALSKANKEAAKSKGKGKNVANDDDDMKPADLPQKWLDYKVEFHFPEPTLLTP PLLQLIEVGFSYPNRPDFKLSGVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLTPTKGE VRRSQKLRIGRYSQHFVDLLTMEENAVQYLLRLHPDQEGMSKAEAVRAKLGKFGLPGHNH LTPIVKLSGGQKARVVFTSISMSHPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVS HDSRLISRVCDDEQRSEIWVVEDGTVNKFDGTFEDYKDELLEEIKKEVEE

Transcript Sequence

Transcript ID	Os03t0441500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:18686899:18689372:-1 gene:Os03g0441500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER F FAMILY MEMBER 2 description:ABC transporter-like domain containing protein. (Os03t0441500-01);Similar to ABC transporter. (Os03t0441500-02)
Sequence	GATCTAATCGACCGAGCCCAAAACTAACCCTAAATTCCCCAGCTCCCCACCACGCCGCCG CCGCCGCCTCCATGGGCCGCAAAGATACTTCCTCGTCGTCCTCCGCCGCCGGCGGCAAGA AGGACAAGCCGATGTCGGTCTCCGCCATTCTGGCCTCCATGGACGCGCCGGCGTCCAAGG CCAAGCCATCCAAGGCGGCGTCCAAGCCCAAGCCCTCCAAGGCGCCCGCGTCGTCTTACA TGGGCGACATCGACCTGCCCCCCTCCGATGAGGAGGAGGACGACGCCGACCTCGTTGCCA TGGCCACGAAGCCCAAGGCGGCCCGCGCCACCGTCGACCTCAACGCCATCGCGCCCTCGC AGAAGGACGCGAAGAAGAAGGACAAGCGCGAGGCGATGGCGGCCGCGCAAGCCGAGGCGG CCAAGCAGGAGGCGCTCCGCGACGACCGCGACGCATTCTCTGTCGTTATTGGCGCGCGCG TCGCTGGATCCGCCGGGGCCTCCGAGGGTGACTCCGCCGCCGCCGATGACAACATCAAGG ATATTGTGCTCGAGAACTTCTCTGTTTCTGCCCGCGGGAAGGAGCTACTCAAGAACGCCT CGCTCCGGATCTCGCACGGCCGGCGCTATGGCCTCGTCGGGCCCAACGGCATGGGCAAGT CCACCCTTCTGAAGCTGCTGTCATGGCGGCAGGTCCCGGTGCCCCGGAGCATTGATGTCC TGCTTGTGGAGCAGGAAATTATTGGAGACAATCGTTCAGCGCTCGAGGCTGTTGTTGCTG CTGATGAAGAGCTCGCAGCGCTTCGTGCCGAGCAGGCAAAGCTCGAGGCCTCTAACGATG CTGATGACAATGAGCGGCTTGCTGAGGTTTATGAGAAGCTCAACCTCCGGGATTCTGATG CTGCCCGGGCTCGTGCATCCAAGATCCTTGCTGGGCTGGGGTTTGATCAGGCTATGCAGG CCAGGTCCACTAAATCGTTCAGTGGTGGCTGGAGGATGCGCATCTCGCTTGCTCGTGCGC TGTTCATGCAGCCAACATTGTTGCTGCTTGATGAACCGACTAATCATCTTGACCTCCGAG CTGTTCTTTGGTTGGAGCAATACTTGTGCTCACAGTGGAAGAAAACACTGATTGTTGTGT CCCATGATCGCGACTTCCTGAACACAGTTTGCAATGAGATCATTCATTTGCATGATAAGA ATCTGCATGTTTATCGTGGAAATTTTGACGACTTTGAGAGTGGGTATGAACAGAAGAGGA AGGAGATGAATAGGAAGTTTGAGGTGTTTGAAAAGCAGATGAAGGCAGCAAAGAAGACTG GGAGCAAGGCAGCGCAAGACAAGGTCAAAGGTCAGGCACTATCAAAGGCTAATAAGGAGG CTGCCAAGAGCAAGGGGAAGGGAAAGAATGTAGCAAATGATGACGACGACATGAAGCCAG CTGATCTTCCACAGAAATGGCTTGACTACAAGGTTGAGTTCCACTTCCCAGAGCCAACTT TGCTCACACCACCGCTCCTTCAGCTCATTGAGGTGGGCTTCAGCTACCCTAATAGGCCAG ATTTCAAGCTGTCTGGTGTTGATGTTGGCATTGACATGGGAACACGTGTTGCAATTGTTG GTCCCAATGGGGCAGGAAAATCTACACTTCTTAATTTACTTGCTGGTGATCTTACCCCAA CCAAAGGAGAGGTAAGGAGGAGTCAGAAGCTGAGGATTGGGCGATACTCACAGCATTTTG TTGACTTACTGACAATGGAGGAAAATGCAGTTCAGTATTTGCTCAGGCTCCATCCTGATC AGGAGGGAATGAGCAAAGCAGAGGCTGTACGTGCGAAGCTCGGAAAATTTGGTTTACCAG GGCACAACCATCTCACTCCAATAGTTAAATTATCTGGTGGACAGAAGGCCCGTGTTGTGT TCACTTCAATATCAATGTCACATCCCCACATTCTCCTGCTGGATGAGCCAACAAATCACC TAGACATGCAAAGTATCGATGCATTGGCAGATGCACTGGATGAATTCACTGGTGGTGTGG TCTTGGTTAGCCATGACTCGAGATTGATCTCTAGAGTGTGTGACGATGAGCAGAGGAGTG AGATATGGGTTGTAGAAGATGGCACTGTGAACAAATTTGATGGAACATTTGAGGACTACA AGGATGAACTTTTGGAAGAAATCAAAAAGGAAGTTGAAGAGTAATGTGTTTTTATAGTTG CAGGATACTGCTTATTCTTTATAGACTGGGCTGGTAAACTTAATGTACTAGTACTTATTT TCTTTGGTTTGCAGAGTATTTGTATGGTTGAGTCCGAAACACCTATTCGAGCTGTTCTTG CTTTTTGCATGATCTAAGAGGTTCCAGGATGAGTCTGATAAATATGTTTTCTATGATTTT GCTGCCAATTACTCTGTACTAAGACTTCCATGATATACATCCATAATAATTCAGTATGAT TTCATGTTATTGGC