Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0441400-03
CDS Infomation	cds chromosome:IRGSP-1.0:3:18679874:18682789:-1 gene:Os03g0441400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0441400-01);Hypothetical conserved gene. (Os03t0441400-02);Pentatricopeptide repeat domain containing protein. (Os03t0441400-03)
Sequence	ATGCGACTGGGCGGATGGATGCTCCGGCCACTGAACCGCGGCCTCCTCCTCCCCACCTTG TCCTGCCCAGTTGCCCCACACCGCCGTGGGTTCGCAGCCTATGCAGCAGCGCTACAGTGG CTGGAGGACGAGCTCACCTCGCTCGCGATCCTCCCCTCCGTCCCCGGGGTGGACTCCTTC GCGTGCGCCAGGCAGTTGCAGGGCTGCATCGCTCGTGGCGACGCCCGCGGCGGCCGCGCC GTGCACGGCCATGTAGTGCGCCGCGGAGGGGTGGGGCGCCTGGACCTCTTCTGCGCCAAC GTCCTGCTCAATATGTACGGGAAGCTCGGGCCCCTTGCCAGCGCGCGCAGGCTGTTCGAC CGAATGCCTGAGCGGAACATGGTGTCCTTCGTCACGCTCGTCCAGGCCCACGCTCAGCGC GGTGATTTTGAGGCTGCCGCGGCTCTGTTCAGGAGGCTGCGGTGGGAGGGGCACGAGGTG AACCAGTTCGTGCTCACCACCATGTTGAAGCTAGCTATTGCCATGGATGCGGCAGGGCTT GCCGGGGGTGTGCACTCATGTGCGTGGAAGCTGGGCCATGATCACAACGCCTTTGTTGGT TCAGGGCTGATTGATGCCTACTCCTTATGCAGTCTTGTCAGTGATGCGGAACATGTGTTT AATGGGATTGTGCGTAAGGATGCTGTTGTCTGGACTGCGATGGTTTCTTGCTATTCTGAA AATGATTGCCCAGAGAATGCCTTTCGGGTCTTTTCCAAGATGAGGGTGTCGGGTTGTAAG CCTAACCCTTTTGCACTAACCAGTGTGCTCAAAGCTGCAGTTTGCTTGCCATCAGTTGTG CTAGGCAAGGGCATCCATGGTTGCGCCATAAAAACCCTTAATGACACGGAGCCTCATGTC GGTGGTGCTTTGCTTGATATGTATGCCAAATGTGGGGATATTAAGGATGCACGTTTGGCT TTTGAGATGATTCCCTATGATGATGTGATACTTCTGAGTTTTATGATATCCCGGTATGCA CAGAGCAATCAGAATGAACAAGCCTTTGAACTGTTCCTCCGATTGATGCGTTCTTCTGTG CTGCCCAATGAATATAGCCTTTCTAGTGTTCTGCAAGCATGTACTAACATGGTTCAGTTG GATTTCGGAAAGCAAATTCATAACCATGCTATAAAAATAGGCCATGAGTCTGATCTTTTT GTTGGAAATGCACTAATGGATTTCTATGCCAAGTGCAACGACATGGATAGCTCACTTAAG ATCTTCTCATCATTGCGAGATGCCAATGAGGTGAGCTGGAACACAATTGTTGTTGGCTTC AGTCAGTCTGGTTTGGGAGAAGAAGCATTGAGTGTATTCTGTGAGATGCAAGCTGCTCAG ATGCCTTGCACTCAAGTTACATACTCGAGTGTGCTCCGGGCTTGTGCAAGCACAGCATCA ATAAGACATGCTGGTCAGATTCATTGTTCAATTGAGAAGTCCACATTTAATAATGACACC GTAATTGGCAATTCACTTATTGATACATATGCTAAGTGCGGATACATTAGGGATGCTCTC AAGGTATTTCAACATTTAATGGAACGCGATATAATTTCATGGAATGCAATAATCTCAGGA TATGCGCTTCATGGACAAGCGGCAGATGCTCTAGAACTTTTTGACAGGATGAATAAAAGC AACGTGGAATCCAATGATATCACTTTTGTTGCTCTGCTATCCGTCTGCAGTAGCACAGGA TTAGTAAATCATGGATTATCTCTGTTCGATTCTATGAGGATTGATCATGGCATCAAACCA AGTATGGAGCATTATACATGCATTGTTAGGCTTCTAGGACGAGCTGGCCGTCTGAATGAT GCTCTACAATTCATTGGAGATATTCCTTCGGCACCATCTGCTATGGTTTGGCGTGCATTG CTTAGCTCTTGTATAATCCATAAGAATGTGGCTCTGGGAAGATTTTCTGCAGAAAAAATA CTTGAGATTGAACCACAAGATGAGACAACCTATGTCTTACTATCAAATATGTATGCTGCA GCTGGAAGTTTGGATCAAGTTGCCCTTTTGAGGAAATCAATGAGGAATATTGGTGTAAGG AAGGTACCTGGTCTTAGTTGGGTTGAGATCAAGGGTGAAATTCATGCCTTTTCAGTGGGA TCAGTGGACCATCCAGATATGCGGGTGATAAATGCAATGCTGGAATGGCTCAATCTTAAA ACTAGTAGGGAAGGTTATATTCCTGACATTAATGTAGTGTTGCACGACGTAGACAAGGAA CAAAAGACTCGAATGCTGTGGGTGCATAGTGAGAGGCTGGCTTTAGCATATGGCCTTGTG ATGACACCTCCTGGGCATCCAATAAGGATATTGAAGAATTTGCGTTCCTGTTTGGATTGT CATACTGCATTTACGGTGATATCTAAAATAGTTAAACGAGAAATCATCGTGAGGGATATA AATCGCTTCCATCATTTTGAGGATGGAAAGTGCTCATGCGGTGACTATTGGTGA

Peptide Sequence

PEP ID	Os03t0441400-03
PEP Infomation	pep chromosome:IRGSP-1.0:3:18679874:18682789:-1 gene:Os03g0441400 transcript:Os03t0441400-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0441400-01);Hypothetical conserved gene. (Os03t0441400-02);Pentatricopeptide repeat domain containing protein. (Os03t0441400-03)
Sequence	MRLGGWMLRPLNRGLLLPTLSCPVAPHRRGFAAYAAALQWLEDELTSLAILPSVPGVDSF ACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFD RMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGL AGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSE NDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHV GGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSV LPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLK IFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTAS IRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISG YALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKP SMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKI LEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVG SVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLV MTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW

Transcript Sequence

Transcript ID	Os03t0441400-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:18679874:18682789:-1 gene:Os03g0441400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0441400-01);Hypothetical conserved gene. (Os03t0441400-02);Pentatricopeptide repeat domain containing protein. (Os03t0441400-03)
Sequence	ATCTTCTCCGGTTCTCCCTCACCGCTCACTGGCTCTCGTCTCTCGCCGCCGCCGCCGCCG CCGCCGCCGCCGTCTTGCCCTCAAGCATCCGGGTTCGCCGATCGCCCCACTTCTCCCTTC CTCCCTCCGCCAGCGCCACCTCCGCGCTACTGCCTCCTCCCTCCTTTCTCGCGCCCGCGC CTCCTGAAACTGGGATCCCCCAATGGCAATGGATTCAAGTATTCAACTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTGAACATTGGGGCCGCCATTT GCCAAAGATATAAGCCCGAGAGGTTCAGCTTCTCGTAGAAGCTAAGGCTGTGATGCGACT GGGCGGATGGATGCTCCGGCCACTGAACCGCGGCCTCCTCCTCCCCACCTTGTCCTGCCC AGTTGCCCCACACCGCCGTGGGTTCGCAGCCTATGCAGCAGCGCTACAGTGGCTGGAGGA CGAGCTCACCTCGCTCGCGATCCTCCCCTCCGTCCCCGGGGTGGACTCCTTCGCGTGCGC CAGGCAGTTGCAGGGCTGCATCGCTCGTGGCGACGCCCGCGGCGGCCGCGCCGTGCACGG CCATGTAGTGCGCCGCGGAGGGGTGGGGCGCCTGGACCTCTTCTGCGCCAACGTCCTGCT CAATATGTACGGGAAGCTCGGGCCCCTTGCCAGCGCGCGCAGGCTGTTCGACCGAATGCC TGAGCGGAACATGGTGTCCTTCGTCACGCTCGTCCAGGCCCACGCTCAGCGCGGTGATTT TGAGGCTGCCGCGGCTCTGTTCAGGAGGCTGCGGTGGGAGGGGCACGAGGTGAACCAGTT CGTGCTCACCACCATGTTGAAGCTAGCTATTGCCATGGATGCGGCAGGGCTTGCCGGGGG TGTGCACTCATGTGCGTGGAAGCTGGGCCATGATCACAACGCCTTTGTTGGTTCAGGGCT GATTGATGCCTACTCCTTATGCAGTCTTGTCAGTGATGCGGAACATGTGTTTAATGGGAT TGTGCGTAAGGATGCTGTTGTCTGGACTGCGATGGTTTCTTGCTATTCTGAAAATGATTG CCCAGAGAATGCCTTTCGGGTCTTTTCCAAGATGAGGGTGTCGGGTTGTAAGCCTAACCC TTTTGCACTAACCAGTGTGCTCAAAGCTGCAGTTTGCTTGCCATCAGTTGTGCTAGGCAA GGGCATCCATGGTTGCGCCATAAAAACCCTTAATGACACGGAGCCTCATGTCGGTGGTGC TTTGCTTGATATGTATGCCAAATGTGGGGATATTAAGGATGCACGTTTGGCTTTTGAGAT GATTCCCTATGATGATGTGATACTTCTGAGTTTTATGATATCCCGGTATGCACAGAGCAA TCAGAATGAACAAGCCTTTGAACTGTTCCTCCGATTGATGCGTTCTTCTGTGCTGCCCAA TGAATATAGCCTTTCTAGTGTTCTGCAAGCATGTACTAACATGGTTCAGTTGGATTTCGG AAAGCAAATTCATAACCATGCTATAAAAATAGGCCATGAGTCTGATCTTTTTGTTGGAAA TGCACTAATGGATTTCTATGCCAAGTGCAACGACATGGATAGCTCACTTAAGATCTTCTC ATCATTGCGAGATGCCAATGAGGTGAGCTGGAACACAATTGTTGTTGGCTTCAGTCAGTC TGGTTTGGGAGAAGAAGCATTGAGTGTATTCTGTGAGATGCAAGCTGCTCAGATGCCTTG CACTCAAGTTACATACTCGAGTGTGCTCCGGGCTTGTGCAAGCACAGCATCAATAAGACA TGCTGGTCAGATTCATTGTTCAATTGAGAAGTCCACATTTAATAATGACACCGTAATTGG CAATTCACTTATTGATACATATGCTAAGTGCGGATACATTAGGGATGCTCTCAAGGTATT TCAACATTTAATGGAACGCGATATAATTTCATGGAATGCAATAATCTCAGGATATGCGCT TCATGGACAAGCGGCAGATGCTCTAGAACTTTTTGACAGGATGAATAAAAGCAACGTGGA ATCCAATGATATCACTTTTGTTGCTCTGCTATCCGTCTGCAGTAGCACAGGATTAGTAAA TCATGGATTATCTCTGTTCGATTCTATGAGGATTGATCATGGCATCAAACCAAGTATGGA GCATTATACATGCATTGTTAGGCTTCTAGGACGAGCTGGCCGTCTGAATGATGCTCTACA ATTCATTGGAGATATTCCTTCGGCACCATCTGCTATGGTTTGGCGTGCATTGCTTAGCTC TTGTATAATCCATAAGAATGTGGCTCTGGGAAGATTTTCTGCAGAAAAAATACTTGAGAT TGAACCACAAGATGAGACAACCTATGTCTTACTATCAAATATGTATGCTGCAGCTGGAAG TTTGGATCAAGTTGCCCTTTTGAGGAAATCAATGAGGAATATTGGTGTAAGGAAGGTACC TGGTCTTAGTTGGGTTGAGATCAAGGGTGAAATTCATGCCTTTTCAGTGGGATCAGTGGA CCATCCAGATATGCGGGTGATAAATGCAATGCTGGAATGGCTCAATCTTAAAACTAGTAG GGAAGGTTATATTCCTGACATTAATGTAGTGTTGCACGACGTAGACAAGGAACAAAAGAC TCGAATGCTGTGGGTGCATAGTGAGAGGCTGGCTTTAGCATATGGCCTTGTGATGACACC TCCTGGGCATCCAATAAGGATATTGAAGAATTTGCGTTCCTGTTTGGATTGTCATACTGC ATTTACGGTGATATCTAAAATAGTTAAACGAGAAATCATCGTGAGGGATATAAATCGCTT CCATCATTTTGAGGATGGAAAGTGCTCATGCGGTGACTATTGGTGATCTTCTGTTGTTCC TTGATGTGTTAAAGGAATCCATACAAGTTATATGTG